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Estimate simulation parameters for the BASiCS simulation from a real dataset.

Usage

BASiCSEstimate(
  counts,
  spike.info = NULL,
  batch = NULL,
  n = 20000,
  thin = 10,
  burn = 5000,
  regression = TRUE,
  params = newBASiCSParams(),
  verbose = TRUE,
  progress = TRUE,
  ...
)

# S3 method for class 'SingleCellExperiment'
BASiCSEstimate(
  counts,
  spike.info = NULL,
  batch = NULL,
  n = 20000,
  thin = 10,
  burn = 5000,
  regression = TRUE,
  params = newBASiCSParams(),
  verbose = TRUE,
  progress = TRUE,
  ...
)

# S3 method for class 'matrix'
BASiCSEstimate(
  counts,
  spike.info = NULL,
  batch = NULL,
  n = 20000,
  thin = 10,
  burn = 5000,
  regression = TRUE,
  params = newBASiCSParams(),
  verbose = TRUE,
  progress = TRUE,
  ...
)

Arguments

counts

either a counts matrix or a SingleCellExperiment object containing count data to estimate parameters from.

spike.info

data.frame describing spike-ins with two columns: "Name" giving the names of the spike-in features (must match rownames(counts)) and "Input" giving the number of input molecules.

batch

vector giving the batch that each cell belongs to.

n

total number of MCMC iterations. Must be >= max(4, thin) and a multiple of thin.

thin

thining period for the MCMC sampler. Must be >= 2.

burn

burn-in period for the MCMC sampler. Must be in the range 1 <= burn < n and a multiple of thin.

regression

logical. Whether to use regression to identify over-dispersion. See BASiCS_MCMC for details.

params

BASiCSParams object to store estimated values in.

verbose

logical. Whether to print progress messages.

progress

logical. Whether to print additional BASiCS progress messages.

...

Optional parameters passed to BASiCS_MCMC.

Value

BASiCSParams object containing the estimated parameters.

Details

This function is just a wrapper around BASiCS_MCMC that takes the output and converts it to a BASiCSParams object. Either a set of spike-ins or batch information (or both) must be supplied. If only batch information is provided there must be at least two batches. See BASiCS_MCMC for details.

Examples

# \donttest{
# Load example data
library(scuttle)
set.seed(1)
sce <- mockSCE()

spike.info <- data.frame(
    Name = rownames(sce)[1:10],
    Input = rnorm(10, 500, 200),
    stringsAsFactors = FALSE
)
params <- BASiCSEstimate(sce[1:100, 1:30], spike.info)
#> Warning: 'BASiCS::newBASiCS_Data' is deprecated.
#> See help("Deprecated")
#> altExp 'spike-ins' is assumed to contain spike-in genes.
#> see help(altExp) for details. 
#> Running with spikes BASiCS sampler (regression case) ... 
#> -----------------------------------------------------
#> MCMC sampler has been started: 20000 iterations to go.
#> -----------------------------------------------------
#> -----------------------------------------------------
#> Iteration 0 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 612.393
#> delta (gene 1): 0.743416
#> phi (cell 1): 0.757726
#> s (cell 1): 1.44699
#> nu (cell 1): 0.416089
#> theta (batch 1): 0.41371
#> betas:    0.8927  -0.0532   0.8013  -1.9110   0.9116   0.9607   0.8638  -1.2077  -0.0110   0.3911  -0.1379  -1.0168
#> 
#> sigma: 0.403606
#> lambda (gene 1): 0.332704
#> epsilon (gene 1): -0.583321
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -4
#> LSdelta (gene 1): -2
#> LSphi: 11
#> LSnu (cell 1): -8.11822
#> LStheta (batch 1): -4
#> -----------------------------------------------------
#> Iteration 20 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 708.912
#> delta (gene 1): 0.627731
#> phi (cell 1): 0.772274
#> s (cell 1): 1.54622
#> nu (cell 1): 0.427917
#> theta (batch 1): 0.309981
#> betas:    0.4507   0.0161   0.1295   0.4678   0.6508   0.6737   0.3515   0.1768  -0.0793  -0.4097  -0.3309  -0.4382
#> 
#> sigma: 0.15265
#> lambda (gene 1): 0.732282
#> epsilon (gene 1): -0.213893
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -4
#> LSdelta (gene 1): -2
#> LSphi: 11
#> LSnu (cell 1): -8.11822
#> LStheta (batch 1): -4
#> -----------------------------------------------------
#> Iteration 40 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 713.338
#> delta (gene 1): 0.724656
#> phi (cell 1): 0.772583
#> s (cell 1): 0.620469
#> nu (cell 1): 0.418365
#> theta (batch 1): 0.366641
#> betas:    1.0819  -0.1418  -0.0693   1.3638   0.6831   0.3289   0.6027  -0.0478   0.4212  -0.5320   0.0834  -0.5715
#> 
#> sigma: 0.152528
#> lambda (gene 1): 0.906016
#> epsilon (gene 1): -0.0976622
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -4
#> LSdelta (gene 1): -2
#> LSphi: 11
#> LSnu (cell 1): -8.11822
#> LStheta (batch 1): -4
#> -----------------------------------------------------
#> Iteration 60 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 637.607
#> delta (gene 1): 0.726841
#> phi (cell 1): 0.77136
#> s (cell 1): 0.544911
#> nu (cell 1): 0.423369
#> theta (batch 1): 0.152667
#> betas:    0.5781  -0.0559   0.6705   1.0208   1.0147   0.0857   0.8605  -0.3467   0.6287  -0.1286  -0.7918   0.2101
#> 
#> sigma: 0.20249
#> lambda (gene 1): 0.983934
#> epsilon (gene 1): 0.0406453
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -3.9
#> LSdelta (gene 1): -1.9
#> LSphi: 10.9
#> LSnu (cell 1): -8.01822
#> LStheta (batch 1): -3.9
#> -----------------------------------------------------
#> Iteration 80 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 685.889
#> delta (gene 1): 0.618394
#> phi (cell 1): 0.762509
#> s (cell 1): 0.522042
#> nu (cell 1): 0.411238
#> theta (batch 1): 0.149572
#> betas:    0.4904  -0.1300   1.0805   0.7494   0.9214   0.3595   0.5359   0.4569   0.7136  -0.4543  -0.0570   0.1283
#> 
#> sigma: 0.169537
#> lambda (gene 1): 1.93737
#> epsilon (gene 1): -0.0072078
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -3.9
#> LSdelta (gene 1): -1.9
#> LSphi: 10.9
#> LSnu (cell 1): -8.01822
#> LStheta (batch 1): -3.9
#> -----------------------------------------------------
#> Iteration 100 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 563.287
#> delta (gene 1): 0.718131
#> phi (cell 1): 0.760514
#> s (cell 1): 0.407932
#> nu (cell 1): 0.424516
#> theta (batch 1): 0.225828
#> betas:    0.7956  -0.0882   0.6865   0.8374   0.6594   0.8342   0.2556  -0.1392   0.1230  -0.2216  -0.2294  -0.2493
#> 
#> sigma: 0.194888
#> lambda (gene 1): 1.41368
#> epsilon (gene 1): -0.21561
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -3.8
#> LSdelta (gene 1): -1.8
#> LSphi: 10.8
#> LSnu (cell 1): -7.91822
#> LStheta (batch 1): -3.8
#> -----------------------------------------------------
#> Iteration 120 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 797.853
#> delta (gene 1): 0.890289
#> phi (cell 1): 0.782918
#> s (cell 1): 0.972972
#> nu (cell 1): 0.446053
#> theta (batch 1): 0.478069
#> betas:    0.5193  -0.1260   0.0608   1.0022   1.3402  -0.0395   1.2248   0.3314  -0.1100   0.0964  -0.2424   0.2598
#> 
#> sigma: 0.179821
#> lambda (gene 1): 0.603137
#> epsilon (gene 1): 0.0906871
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -3.8
#> LSdelta (gene 1): -1.8
#> LSphi: 10.8
#> LSnu (cell 1): -7.91822
#> LStheta (batch 1): -3.8
#> -----------------------------------------------------
#> Iteration 140 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 735.746
#> delta (gene 1): 0.980585
#> phi (cell 1): 0.801773
#> s (cell 1): 0.404724
#> nu (cell 1): 0.418923
#> theta (batch 1): 0.689914
#> betas:    0.8688  -0.0349   0.4958   0.7103   0.7183   0.6826   0.1785  -0.0599  -0.2749  -0.0929  -0.2423  -0.5017
#> 
#> sigma: 0.186253
#> lambda (gene 1): 0.561452
#> epsilon (gene 1): -0.0976604
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -3.8
#> LSdelta (gene 1): -1.8
#> LSphi: 10.8
#> LSnu (cell 1): -7.91822
#> LStheta (batch 1): -3.8
#> -----------------------------------------------------
#> Iteration 160 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 849.564
#> delta (gene 1): 0.469552
#> phi (cell 1): 0.807331
#> s (cell 1): 2.35875
#> nu (cell 1): 0.416869
#> theta (batch 1): 0.735792
#> betas:    0.6103  -0.0757   0.7574   0.8956   0.5797   1.0035   0.2244   0.0442   0.2758  -0.2695  -0.0394  -0.5081
#> 
#> sigma: 0.23714
#> lambda (gene 1): 0.359041
#> epsilon (gene 1): -0.616668
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -3.7
#> LSdelta (gene 1): -1.7
#> LSphi: 10.7
#> LSnu (cell 1): -7.81822
#> LStheta (batch 1): -3.7
#> -----------------------------------------------------
#> Iteration 180 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 815.994
#> delta (gene 1): 0.810332
#> phi (cell 1): 0.811244
#> s (cell 1): 1.28391
#> nu (cell 1): 0.409256
#> theta (batch 1): 0.340313
#> betas:    0.8094  -0.1115   0.7416   0.8280   0.2467   1.2074  -0.1776   0.1818   0.7682  -0.6071  -0.2893   0.0078
#> 
#> sigma: 0.130827
#> lambda (gene 1): 0.547525
#> epsilon (gene 1): 0.00715975
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -3.7
#> LSdelta (gene 1): -1.7
#> LSphi: 10.7
#> LSnu (cell 1): -7.81822
#> LStheta (batch 1): -3.7
#> -----------------------------------------------------
#> Iteration 200 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 575.594
#> delta (gene 1): 1.36356
#> phi (cell 1): 0.809938
#> s (cell 1): 0.476737
#> nu (cell 1): 0.432895
#> theta (batch 1): 0.13821
#> betas:    0.3955   0.0764   0.7008   0.5727   0.8916   0.3778   0.9189   0.1095  -0.4930   0.2703  -0.8258  -0.9452
#> 
#> sigma: 0.209723
#> lambda (gene 1): 1.9519
#> epsilon (gene 1): 0.486004
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -3.6
#> LSdelta (gene 1): -1.8
#> LSphi: 10.6
#> LSnu (cell 1): -7.71822
#> LStheta (batch 1): -3.6
#> -----------------------------------------------------
#> Iteration 220 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 659.728
#> delta (gene 1): 0.604814
#> phi (cell 1): 0.81435
#> s (cell 1): 0.486223
#> nu (cell 1): 0.413457
#> theta (batch 1): 0.30231
#> betas:    0.1300   0.0509   0.7567   0.5693   1.1919   0.9970   0.1974   0.5449   0.0692  -0.3362  -0.1581  -0.6566
#> 
#> sigma: 0.169631
#> lambda (gene 1): 0.773093
#> epsilon (gene 1): -0.357493
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -3.6
#> LSdelta (gene 1): -1.8
#> LSphi: 10.6
#> LSnu (cell 1): -7.71822
#> LStheta (batch 1): -3.6
#> -----------------------------------------------------
#> Iteration 240 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 732.354
#> delta (gene 1): 1.27007
#> phi (cell 1): 0.832492
#> s (cell 1): 0.553175
#> nu (cell 1): 0.41218
#> theta (batch 1): 0.34972
#> betas:    0.8022  -0.1111   0.2219   0.8808   1.2095   0.7319   0.2099   0.4930   0.1415  -0.5444   0.3313  -0.6329
#> 
#> sigma: 0.16135
#> lambda (gene 1): 1.30039
#> epsilon (gene 1): 0.502133
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -3.6
#> LSdelta (gene 1): -1.8
#> LSphi: 10.6
#> LSnu (cell 1): -7.71822
#> LStheta (batch 1): -3.6
#> -----------------------------------------------------
#> Iteration 260 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 647.068
#> delta (gene 1): 0.807461
#> phi (cell 1): 0.829129
#> s (cell 1): 0.460451
#> nu (cell 1): 0.430204
#> theta (batch 1): 0.253096
#> betas:    1.5201  -0.2056   0.0251   0.9946   1.1511   0.4459   0.2233   0.3148   0.0647  -0.2690   0.1499  -0.7133
#> 
#> sigma: 0.155382
#> lambda (gene 1): 0.569261
#> epsilon (gene 1): -0.0113345
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -3.5
#> LSdelta (gene 1): -1.7
#> LSphi: 10.5
#> LSnu (cell 1): -7.61822
#> LStheta (batch 1): -3.5
#> -----------------------------------------------------
#> Iteration 280 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 639.978
#> delta (gene 1): 0.666937
#> phi (cell 1): 0.853342
#> s (cell 1): 0.553094
#> nu (cell 1): 0.416717
#> theta (batch 1): 0.225468
#> betas:    1.0567  -0.1595   0.2920   0.8114   0.7284   0.2207   0.6833   0.4518  -0.0570  -0.2470  -0.0401  -0.0734
#> 
#> sigma: 0.138869
#> lambda (gene 1): 1.10543
#> epsilon (gene 1): -0.147818
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -3.5
#> LSdelta (gene 1): -1.7
#> LSphi: 10.5
#> LSnu (cell 1): -7.61822
#> LStheta (batch 1): -3.5
#> -----------------------------------------------------
#> Iteration 300 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 675.92
#> delta (gene 1): 0.604439
#> phi (cell 1): 0.837323
#> s (cell 1): 1.3003
#> nu (cell 1): 0.426241
#> theta (batch 1): 0.24225
#> betas:    0.9732  -0.0926   0.2612  -0.1928   0.4569   1.1516   0.2826   0.0395  -0.0136   0.1290  -0.6122  -0.2708
#> 
#> sigma: 0.201467
#> lambda (gene 1): 0.63684
#> epsilon (gene 1): -0.405739
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -3.4
#> LSdelta (gene 1): -1.6
#> LSphi: 10.4
#> LSnu (cell 1): -7.51822
#> LStheta (batch 1): -3.4
#> -----------------------------------------------------
#> Iteration 320 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 655.698
#> delta (gene 1): 0.876922
#> phi (cell 1): 0.82786
#> s (cell 1): 0.31607
#> nu (cell 1): 0.415104
#> theta (batch 1): 0.350383
#> betas:    0.3184  -0.0387   0.0643   1.1955   0.4183   0.8956   0.6721   0.0579   0.4675  -0.0547  -0.4268  -0.0155
#> 
#> sigma: 0.124401
#> lambda (gene 1): 0.380198
#> epsilon (gene 1): -0.0825703
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -3.4
#> LSdelta (gene 1): -1.6
#> LSphi: 10.4
#> LSnu (cell 1): -7.51822
#> LStheta (batch 1): -3.4
#> -----------------------------------------------------
#> Iteration 340 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 867.198
#> delta (gene 1): 1.03997
#> phi (cell 1): 0.818188
#> s (cell 1): 0.32805
#> nu (cell 1): 0.42971
#> theta (batch 1): 0.146339
#> betas:    1.0133  -0.1006   0.0149   0.6791   0.6707   0.8055   0.1387   0.4708  -0.1521  -0.1914  -0.0678  -0.5161
#> 
#> sigma: 0.132267
#> lambda (gene 1): 0.752804
#> epsilon (gene 1): 0.108233
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -3.4
#> LSdelta (gene 1): -1.6
#> LSphi: 10.4
#> LSnu (cell 1): -7.51822
#> LStheta (batch 1): -3.4
#> -----------------------------------------------------
#> Iteration 360 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 713.789
#> delta (gene 1): 0.472612
#> phi (cell 1): 0.832207
#> s (cell 1): 0.517525
#> nu (cell 1): 0.421938
#> theta (batch 1): 0.262531
#> betas:    0.1679   0.0257   0.1376   1.1785   0.1898   1.3269   0.3361   0.2596   0.4829  -0.3532  -0.3635  -0.4714
#> 
#> sigma: 0.176775
#> lambda (gene 1): 0.920756
#> epsilon (gene 1): -0.701453
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -3.3
#> LSdelta (gene 1): -1.5
#> LSphi: 10.3
#> LSnu (cell 1): -7.41822
#> LStheta (batch 1): -3.3
#> -----------------------------------------------------
#> Iteration 380 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 736.781
#> delta (gene 1): 0.666058
#> phi (cell 1): 0.821979
#> s (cell 1): 0.372263
#> nu (cell 1): 0.424378
#> theta (batch 1): 0.114052
#> betas:    1.3384  -0.0973  -0.2927   0.1801   1.0855   0.1801   0.4275  -0.0618  -0.0486  -0.1928  -0.5430  -0.4732
#> 
#> sigma: 0.190045
#> lambda (gene 1): 0.315672
#> epsilon (gene 1): -0.356833
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -3.3
#> LSdelta (gene 1): -1.5
#> LSphi: 10.3
#> LSnu (cell 1): -7.41822
#> LStheta (batch 1): -3.3
#> -----------------------------------------------------
#> Iteration 400 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 760.011
#> delta (gene 1): 0.535978
#> phi (cell 1): 0.801485
#> s (cell 1): 0.30151
#> nu (cell 1): 0.431843
#> theta (batch 1): 0.201115
#> betas:    0.7275  -0.0449   0.4524   0.3625   0.8253   0.8039   0.2767   0.1012  -0.0473   0.0478  -0.5399  -0.4009
#> 
#> sigma: 0.165869
#> lambda (gene 1): 1.10833
#> epsilon (gene 1): -0.55017
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -3.2
#> LSdelta (gene 1): -1.4
#> LSphi: 10.2
#> LSnu (cell 1): -7.31822
#> LStheta (batch 1): -3.2
#> -----------------------------------------------------
#> Iteration 420 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 797.011
#> delta (gene 1): 0.586877
#> phi (cell 1): 0.800076
#> s (cell 1): 0.283104
#> nu (cell 1): 0.403224
#> theta (batch 1): 0.251445
#> betas:    1.4702  -0.1754  -0.1947   0.3712   0.9484   0.3178   0.1274  -0.0425   0.6061  -0.6747  -0.2841  -0.1055
#> 
#> sigma: 0.190994
#> lambda (gene 1): 0.524659
#> epsilon (gene 1): -0.296731
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -3.2
#> LSdelta (gene 1): -1.4
#> LSphi: 10.2
#> LSnu (cell 1): -7.31822
#> LStheta (batch 1): -3.2
#> -----------------------------------------------------
#> Iteration 440 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 1032.46
#> delta (gene 1): 0.639972
#> phi (cell 1): 0.764849
#> s (cell 1): 1.14933
#> nu (cell 1): 0.426301
#> theta (batch 1): 0.397822
#> betas:    0.4003  -0.0649   0.7473   0.5183   0.5497   0.9688   0.8513   0.0520   0.4991  -0.2633  -0.2284  -0.0539
#> 
#> sigma: 0.178163
#> lambda (gene 1): 0.607369
#> epsilon (gene 1): -0.308058
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -3.2
#> LSdelta (gene 1): -1.4
#> LSphi: 10.2
#> LSnu (cell 1): -7.31822
#> LStheta (batch 1): -3.2
#> -----------------------------------------------------
#> Iteration 460 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 584.2
#> delta (gene 1): 0.646068
#> phi (cell 1): 0.806378
#> s (cell 1): 0.932742
#> nu (cell 1): 0.415482
#> theta (batch 1): 0.488112
#> betas:    0.6290  -0.0993   0.1958  -0.2268   1.1604   0.7165   0.3500   0.6171   0.1234   0.1905  -0.2630  -0.2491
#> 
#> sigma: 0.145881
#> lambda (gene 1): 1.66148
#> epsilon (gene 1): -0.280509
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -3.1
#> LSdelta (gene 1): -1.3
#> LSphi: 10.1
#> LSnu (cell 1): -7.21822
#> LStheta (batch 1): -3.1
#> -----------------------------------------------------
#> Iteration 480 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 795.977
#> delta (gene 1): 0.638956
#> phi (cell 1): 0.81262
#> s (cell 1): 0.2123
#> nu (cell 1): 0.418381
#> theta (batch 1): 0.228252
#> betas:    0.8413  -0.0736   0.0904   0.3983   0.6103   0.6890   1.0004   0.0987   0.1261  -0.0640  -0.3314  -0.4301
#> 
#> sigma: 0.17319
#> lambda (gene 1): 0.884156
#> epsilon (gene 1): -0.25634
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -3.1
#> LSdelta (gene 1): -1.3
#> LSphi: 10.1
#> LSnu (cell 1): -7.21822
#> LStheta (batch 1): -3.1
#> -----------------------------------------------------
#> Iteration 500 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 648.616
#> delta (gene 1): 0.776702
#> phi (cell 1): 0.81141
#> s (cell 1): 0.58267
#> nu (cell 1): 0.4202
#> theta (batch 1): 0.174408
#> betas:    0.5528  -0.0604   0.4497   0.7047   0.5900   0.9806   0.3068   0.5095   0.1271  -0.3055   0.0225  -0.5205
#> 
#> sigma: 0.239332
#> lambda (gene 1): 0.907951
#> epsilon (gene 1): -0.146181
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -3
#> LSdelta (gene 1): -1.2
#> LSphi: 10
#> LSnu (cell 1): -7.11822
#> LStheta (batch 1): -3
#> -----------------------------------------------------
#> Iteration 520 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 827.89
#> delta (gene 1): 0.632356
#> phi (cell 1): 0.801272
#> s (cell 1): 0.53867
#> nu (cell 1): 0.424486
#> theta (batch 1): 0.283708
#> betas:    0.6219   0.0057   0.2170   0.3281   1.2539   0.6854   0.5134   0.2618  -0.2961  -0.1285  -0.3374  -0.4431
#> 
#> sigma: 0.188041
#> lambda (gene 1): 1.0057
#> epsilon (gene 1): -0.462772
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -3
#> LSdelta (gene 1): -1.2
#> LSphi: 10
#> LSnu (cell 1): -7.11822
#> LStheta (batch 1): -3
#> -----------------------------------------------------
#> Iteration 540 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 880.439
#> delta (gene 1): 1.51701
#> phi (cell 1): 0.792955
#> s (cell 1): 1.05777
#> nu (cell 1): 0.411961
#> theta (batch 1): 0.197289
#> betas:    0.2561  -0.0943   0.0698   1.0777   0.2390   1.1243   0.8561   0.5585   0.1516   0.0286   0.0278  -0.0103
#> 
#> sigma: 0.119578
#> lambda (gene 1): 0.507306
#> epsilon (gene 1): 0.500132
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -3
#> LSdelta (gene 1): -1.2
#> LSphi: 10
#> LSnu (cell 1): -7.11822
#> LStheta (batch 1): -3
#> -----------------------------------------------------
#> Iteration 560 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 553.995
#> delta (gene 1): 1.02851
#> phi (cell 1): 0.784845
#> s (cell 1): 0.405615
#> nu (cell 1): 0.408771
#> theta (batch 1): 0.327566
#> betas:    0.4563  -0.0400  -0.2376   1.2150   0.7709   0.6890   0.0596   0.5470   0.3958  -0.7887   0.4626  -0.7534
#> 
#> sigma: 0.186469
#> lambda (gene 1): 2.1682
#> epsilon (gene 1): 0.153687
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.9
#> LSdelta (gene 1): -1.3
#> LSphi: 9.9
#> LSnu (cell 1): -7.01822
#> LStheta (batch 1): -2.9
#> -----------------------------------------------------
#> Iteration 580 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 632.676
#> delta (gene 1): 0.508431
#> phi (cell 1): 0.810843
#> s (cell 1): 0.178114
#> nu (cell 1): 0.408561
#> theta (batch 1): 0.340004
#> betas:    0.6527  -0.0053   0.3595   0.3598   1.0824   0.6626   0.4551  -0.0985   0.2627  -0.7109  -0.0458  -0.7096
#> 
#> sigma: 0.139997
#> lambda (gene 1): 0.4616
#> epsilon (gene 1): -0.470895
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.9
#> LSdelta (gene 1): -1.3
#> LSphi: 9.9
#> LSnu (cell 1): -7.01822
#> LStheta (batch 1): -2.9
#> -----------------------------------------------------
#> Iteration 600 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 931.793
#> delta (gene 1): 0.598007
#> phi (cell 1): 0.79078
#> s (cell 1): 0.460381
#> nu (cell 1): 0.420494
#> theta (batch 1): 0.294981
#> betas:    0.8558   0.0060   0.6834   1.6290  -0.2696   1.0643   0.4020  -0.2071  -0.1039  -0.1532  -0.9213  -0.4225
#> 
#> sigma: 0.191649
#> lambda (gene 1): 1.30539
#> epsilon (gene 1): -0.327858
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.8
#> LSdelta (gene 1): -1.2
#> LSphi: 9.8
#> LSnu (cell 1): -6.91822
#> LStheta (batch 1): -2.8
#> -----------------------------------------------------
#> Iteration 620 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 663.973
#> delta (gene 1): 0.886481
#> phi (cell 1): 0.797743
#> s (cell 1): 0.366962
#> nu (cell 1): 0.412171
#> theta (batch 1): 0.237795
#> betas:    0.7508  -0.0271  -0.4204   1.1378   0.8277   0.2386   0.2935   0.4584   0.0124  -0.7725   0.0609  -0.4495
#> 
#> sigma: 0.156683
#> lambda (gene 1): 1.02235
#> epsilon (gene 1): 0.04849
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.8
#> LSdelta (gene 1): -1.2
#> LSphi: 9.8
#> LSnu (cell 1): -6.91822
#> LStheta (batch 1): -2.8
#> -----------------------------------------------------
#> Iteration 640 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 684.189
#> delta (gene 1): 0.851437
#> phi (cell 1): 0.746077
#> s (cell 1): 0.471177
#> nu (cell 1): 0.415212
#> theta (batch 1): 0.134536
#> betas:    1.1088  -0.0175   0.7671   0.6808   0.3287   0.6300   0.4514   0.0478  -0.2968  -0.6187  -0.3521  -0.6459
#> 
#> sigma: 0.150178
#> lambda (gene 1): 1.08392
#> epsilon (gene 1): 0.0874749
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.8
#> LSdelta (gene 1): -1.2
#> LSphi: 9.8
#> LSnu (cell 1): -6.91822
#> LStheta (batch 1): -2.8
#> -----------------------------------------------------
#> Iteration 660 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 619.803
#> delta (gene 1): 0.619583
#> phi (cell 1): 0.747034
#> s (cell 1): 0.516548
#> nu (cell 1): 0.40947
#> theta (batch 1): 0.0528125
#> betas:    0.3487  -0.0092   0.6150   0.7591   0.9397   1.1313  -0.2640   0.4216   0.2442  -0.4164  -0.5328  -0.1109
#> 
#> sigma: 0.184606
#> lambda (gene 1): 0.496853
#> epsilon (gene 1): -0.235391
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.7
#> LSdelta (gene 1): -1.3
#> LSphi: 9.7
#> LSnu (cell 1): -6.81822
#> LStheta (batch 1): -2.7
#> -----------------------------------------------------
#> Iteration 680 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 719.477
#> delta (gene 1): 0.816503
#> phi (cell 1): 0.780245
#> s (cell 1): 0.327766
#> nu (cell 1): 0.420606
#> theta (batch 1): 0.115936
#> betas:    1.2695  -0.1285   0.8128   0.4609   0.3874   0.7961   0.2682  -0.4213   0.1891  -0.1427  -0.6513   0.0576
#> 
#> sigma: 0.156466
#> lambda (gene 1): 0.568002
#> epsilon (gene 1): -0.107946
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.7
#> LSdelta (gene 1): -1.3
#> LSphi: 9.7
#> LSnu (cell 1): -6.81822
#> LStheta (batch 1): -2.7
#> -----------------------------------------------------
#> Iteration 700 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 604.417
#> delta (gene 1): 0.717157
#> phi (cell 1): 0.761547
#> s (cell 1): 0.337213
#> nu (cell 1): 0.426637
#> theta (batch 1): 0.187597
#> betas:    0.8709   0.0536   0.4402   0.5335   0.5962   0.2676   0.1299   0.2932  -0.5380  -0.7042  -0.1594  -1.0690
#> 
#> sigma: 0.136749
#> lambda (gene 1): 0.640002
#> epsilon (gene 1): -0.136283
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.6
#> LSdelta (gene 1): -1.4
#> LSphi: 9.6
#> LSnu (cell 1): -6.71822
#> LStheta (batch 1): -2.6
#> -----------------------------------------------------
#> Iteration 720 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 613.447
#> delta (gene 1): 0.402623
#> phi (cell 1): 0.710469
#> s (cell 1): 0.677531
#> nu (cell 1): 0.439273
#> theta (batch 1): 0.218764
#> betas:    0.7581  -0.0063   0.5707   0.8501   0.8668   0.3730   0.1744   0.3671  -0.1347  -0.4393  -0.0967  -0.9864
#> 
#> sigma: 0.175653
#> lambda (gene 1): 0.617058
#> epsilon (gene 1): -0.830177
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.6
#> LSdelta (gene 1): -1.4
#> LSphi: 9.6
#> LSnu (cell 1): -6.71822
#> LStheta (batch 1): -2.6
#> -----------------------------------------------------
#> Iteration 740 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 703.825
#> delta (gene 1): 0.600101
#> phi (cell 1): 0.730204
#> s (cell 1): 0.496036
#> nu (cell 1): 0.429001
#> theta (batch 1): 0.095981
#> betas:    0.7504  -0.0573   0.7018   0.8750   0.4853   0.8333   0.1889   0.1142   0.0929  -0.1654  -0.6862   0.0147
#> 
#> sigma: 0.123243
#> lambda (gene 1): 0.363062
#> epsilon (gene 1): -0.303909
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.6
#> LSdelta (gene 1): -1.4
#> LSphi: 9.6
#> LSnu (cell 1): -6.71822
#> LStheta (batch 1): -2.6
#> -----------------------------------------------------
#> Iteration 760 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 832.839
#> delta (gene 1): 0.689339
#> phi (cell 1): 0.722997
#> s (cell 1): 0.35456
#> nu (cell 1): 0.419765
#> theta (batch 1): 0.0347035
#> betas:    0.4402  -0.0168   0.2834   0.4494   0.9795   0.8666   0.1643   0.4259  -0.2491   0.0835  -0.3818  -0.6677
#> 
#> sigma: 0.154
#> lambda (gene 1): 0.764227
#> epsilon (gene 1): -0.0977833
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.5
#> LSdelta (gene 1): -1.3
#> LSphi: 9.5
#> LSnu (cell 1): -6.61822
#> LStheta (batch 1): -2.5
#> -----------------------------------------------------
#> Iteration 780 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 807.264
#> delta (gene 1): 0.75734
#> phi (cell 1): 0.688066
#> s (cell 1): 0.57054
#> nu (cell 1): 0.425891
#> theta (batch 1): 0.127587
#> betas:    0.8475   0.0022   0.0081   0.4986   0.8734   0.2697   0.4200   0.2678  -0.3586  -0.2617  -0.3500  -0.8854
#> 
#> sigma: 0.199738
#> lambda (gene 1): 0.717843
#> epsilon (gene 1): -0.0791421
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.5
#> LSdelta (gene 1): -1.3
#> LSphi: 9.5
#> LSnu (cell 1): -6.61822
#> LStheta (batch 1): -2.5
#> -----------------------------------------------------
#> Iteration 800 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 788.281
#> delta (gene 1): 0.489018
#> phi (cell 1): 0.738075
#> s (cell 1): 0.398237
#> nu (cell 1): 0.42839
#> theta (batch 1): 0.129938
#> betas:    1.0904  -0.0596   0.5966  -0.1029   0.8478   0.4256   0.6766  -0.2720  -0.0559   0.0724  -0.8450  -0.2829
#> 
#> sigma: 0.151551
#> lambda (gene 1): 0.846606
#> epsilon (gene 1): -0.554855
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.2
#> LSphi: 9.4
#> LSnu (cell 1): -6.51822
#> LStheta (batch 1): -2.4
#> -----------------------------------------------------
#> Iteration 820 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 738.774
#> delta (gene 1): 0.58634
#> phi (cell 1): 0.67641
#> s (cell 1): 0.465747
#> nu (cell 1): 0.424523
#> theta (batch 1): 0.179922
#> betas:    1.1874  -0.1319   0.6333   0.4089   0.7503   0.8865   0.0589   0.4373  -0.2225  -0.1759  -0.4422   0.0644
#> 
#> sigma: 0.127953
#> lambda (gene 1): 3.22048
#> epsilon (gene 1): -0.258528
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.2
#> LSphi: 9.4
#> LSnu (cell 1): -6.51822
#> LStheta (batch 1): -2.4
#> -----------------------------------------------------
#> Iteration 840 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 830.355
#> delta (gene 1): 0.528007
#> phi (cell 1): 0.687979
#> s (cell 1): 0.496224
#> nu (cell 1): 0.430086
#> theta (batch 1): 0.298198
#> betas:    0.2802   0.0281   0.0636   1.0447   1.1983   0.3193   1.0277  -0.1399   0.0194   0.2352  -0.9752  -0.1554
#> 
#> sigma: 0.226076
#> lambda (gene 1): 0.885336
#> epsilon (gene 1): -0.40377
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.2
#> LSphi: 9.4
#> LSnu (cell 1): -6.51822
#> LStheta (batch 1): -2.4
#> -----------------------------------------------------
#> Iteration 860 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 685.662
#> delta (gene 1): 0.731814
#> phi (cell 1): 0.648184
#> s (cell 1): 0.331016
#> nu (cell 1): 0.427271
#> theta (batch 1): 0.156761
#> betas:    0.4096  -0.0399   0.1325   1.0910   0.5301   1.2395   0.2842   0.1427  -0.0615   0.0272  -0.3229  -0.0779
#> 
#> sigma: 0.179701
#> lambda (gene 1): 1.15507
#> epsilon (gene 1): -0.27958
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.3
#> LSdelta (gene 1): -1.1
#> LSphi: 9.3
#> LSnu (cell 1): -6.41822
#> LStheta (batch 1): -2.3
#> -----------------------------------------------------
#> Iteration 880 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 673.96
#> delta (gene 1): 0.678326
#> phi (cell 1): 0.641687
#> s (cell 1): 0.417818
#> nu (cell 1): 0.433908
#> theta (batch 1): 0.236148
#> betas:    0.9943  -0.1251   0.5496   0.3371   1.1194   0.3360   0.5849  -0.1528   0.3182  -0.2643  -0.3462  -0.1656
#> 
#> sigma: 0.141664
#> lambda (gene 1): 0.873194
#> epsilon (gene 1): -0.278083
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.3
#> LSdelta (gene 1): -1.1
#> LSphi: 9.3
#> LSnu (cell 1): -6.41822
#> LStheta (batch 1): -2.3
#> -----------------------------------------------------
#> Iteration 900 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 787.61
#> delta (gene 1): 0.521418
#> phi (cell 1): 0.714554
#> s (cell 1): 0.255872
#> nu (cell 1): 0.424335
#> theta (batch 1): 0.213541
#> betas:    0.7380  -0.1173   0.7957   0.4089   1.0680   0.5434   0.7736   0.3666  -0.1830  -0.1579  -0.0637  -0.0135
#> 
#> sigma: 0.16903
#> lambda (gene 1): 0.525802
#> epsilon (gene 1): -0.369041
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.2
#> LSdelta (gene 1): -1
#> LSphi: 9.2
#> LSnu (cell 1): -6.31822
#> LStheta (batch 1): -2.2
#> -----------------------------------------------------
#> Iteration 920 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 537.921
#> delta (gene 1): 0.537307
#> phi (cell 1): 0.716713
#> s (cell 1): 0.289781
#> nu (cell 1): 0.427002
#> theta (batch 1): 0.17298
#> betas:    1.1756  -0.1513   0.6975   0.1739   0.5249   1.3194  -0.2577   0.6120   0.0370  -0.1496  -0.7317   0.3980
#> 
#> sigma: 0.232639
#> lambda (gene 1): 0.654818
#> epsilon (gene 1): -0.275992
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.2
#> LSdelta (gene 1): -1
#> LSphi: 9.2
#> LSnu (cell 1): -6.31822
#> LStheta (batch 1): -2.2
#> -----------------------------------------------------
#> Iteration 940 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 1079.57
#> delta (gene 1): 0.967165
#> phi (cell 1): 0.756475
#> s (cell 1): 0.386714
#> nu (cell 1): 0.402175
#> theta (batch 1): 0.300527
#> betas:    0.8387  -0.1039   0.6844   0.5276   0.6850   0.7592   0.2546   0.4344   0.0357  -0.0821  -0.3901  -0.0633
#> 
#> sigma: 0.143005
#> lambda (gene 1): 1.26685
#> epsilon (gene 1): 0.168212
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.2
#> LSdelta (gene 1): -1
#> LSphi: 9.2
#> LSnu (cell 1): -6.31822
#> LStheta (batch 1): -2.2
#> -----------------------------------------------------
#> Iteration 960 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 779.952
#> delta (gene 1): 0.697679
#> phi (cell 1): 0.705303
#> s (cell 1): 0.805381
#> nu (cell 1): 0.438588
#> theta (batch 1): 0.445646
#> betas:    0.8170  -0.1303   0.6221   0.3136   0.7740   0.9440   0.0692   1.0060  -0.1915  -0.3059   0.0737  -0.3613
#> 
#> sigma: 0.152776
#> lambda (gene 1): 1.19028
#> epsilon (gene 1): -0.167072
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.3
#> LSdelta (gene 1): -1.1
#> LSphi: 9.1
#> LSnu (cell 1): -6.21822
#> LStheta (batch 1): -2.1
#> -----------------------------------------------------
#> Iteration 980 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 610.574
#> delta (gene 1): 0.653536
#> phi (cell 1): 0.741158
#> s (cell 1): 0.197299
#> nu (cell 1): 0.432135
#> theta (batch 1): 0.564678
#> betas:    0.2708   0.0730   0.7979   0.8121   0.7544   0.5069   0.4200   0.3131  -0.2044  -0.4321  -0.5263  -0.6141
#> 
#> sigma: 0.132476
#> lambda (gene 1): 0.488464
#> epsilon (gene 1): -0.216342
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.3
#> LSdelta (gene 1): -1.1
#> LSphi: 9.1
#> LSnu (cell 1): -6.21822
#> LStheta (batch 1): -2.1
#> -----------------------------------------------------
#> Iteration 1000 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 663.244
#> delta (gene 1): 0.545635
#> phi (cell 1): 0.68145
#> s (cell 1): 1.69347
#> nu (cell 1): 0.428388
#> theta (batch 1): 0.477622
#> betas:    1.2419  -0.1729   0.6332   1.1355   0.5225   0.4724   0.2580   0.7642  -0.7842   0.2009  -0.2500  -0.1451
#> 
#> sigma: 0.212931
#> lambda (gene 1): 0.725376
#> epsilon (gene 1): -0.368814
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.2
#> LSdelta (gene 1): -1.2
#> LSphi: 9
#> LSnu (cell 1): -6.31822
#> LStheta (batch 1): -2
#> -----------------------------------------------------
#> Iteration 1020 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 702.356
#> delta (gene 1): 0.885672
#> phi (cell 1): 0.656077
#> s (cell 1): 0.450988
#> nu (cell 1): 0.422775
#> theta (batch 1): 0.106981
#> betas:    0.8141  -0.1402   0.5123   0.7630   0.8367   0.4667   0.5941   0.0717   0.1138   0.0608  -0.3756  -0.0661
#> 
#> sigma: 0.116066
#> lambda (gene 1): 1.82948
#> epsilon (gene 1): 0.0447133
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.2
#> LSdelta (gene 1): -1.2
#> LSphi: 9
#> LSnu (cell 1): -6.31822
#> LStheta (batch 1): -2
#> -----------------------------------------------------
#> Iteration 1040 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 914.22
#> delta (gene 1): 0.68757
#> phi (cell 1): 0.651759
#> s (cell 1): 0.452876
#> nu (cell 1): 0.427612
#> theta (batch 1): 0.0145945
#> betas:    0.6662  -0.1092   0.8910   1.2868   0.3977   0.4389   0.5399   0.4241  -0.0730   0.1625  -0.5544   0.3225
#> 
#> sigma: 0.131622
#> lambda (gene 1): 0.928615
#> epsilon (gene 1): -0.286783
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.2
#> LSdelta (gene 1): -1.2
#> LSphi: 9
#> LSnu (cell 1): -6.31822
#> LStheta (batch 1): -2
#> -----------------------------------------------------
#> Iteration 1060 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 678.072
#> delta (gene 1): 0.549119
#> phi (cell 1): 0.663242
#> s (cell 1): 0.409934
#> nu (cell 1): 0.424727
#> theta (batch 1): 0.006108
#> betas:    0.7788   0.0498   0.4761   0.1200   0.6444   0.6841  -0.0054   0.2518  -0.5364  -0.2764  -0.5835  -1.0292
#> 
#> sigma: 0.171529
#> lambda (gene 1): 0.282528
#> epsilon (gene 1): -0.472393
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.1
#> LSdelta (gene 1): -1.1
#> LSphi: 8.9
#> LSnu (cell 1): -6.21822
#> LStheta (batch 1): -1.9
#> -----------------------------------------------------
#> Iteration 1080 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 874.173
#> delta (gene 1): 0.571287
#> phi (cell 1): 0.626282
#> s (cell 1): 0.381455
#> nu (cell 1): 0.417287
#> theta (batch 1): 0.0124832
#> betas:    1.1566  -0.2190   0.7742   0.5578   0.6670   0.8444   0.1452   0.5202   0.1369  -0.2014   0.0345   0.4444
#> 
#> sigma: 0.167778
#> lambda (gene 1): 2.01693
#> epsilon (gene 1): -0.437821
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.1
#> LSdelta (gene 1): -1.1
#> LSphi: 8.9
#> LSnu (cell 1): -6.21822
#> LStheta (batch 1): -1.9
#> -----------------------------------------------------
#> Iteration 1100 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 767.156
#> delta (gene 1): 0.733467
#> phi (cell 1): 0.632049
#> s (cell 1): 0.858189
#> nu (cell 1): 0.425863
#> theta (batch 1): 0.126462
#> betas:    0.9483  -0.0449   0.5822   0.6511   1.3910  -0.2976   0.6578   0.0150  -0.3469   0.4143  -1.1905  -0.2615
#> 
#> sigma: 0.187103
#> lambda (gene 1): 1.30044
#> epsilon (gene 1): -0.00642973
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2
#> LSdelta (gene 1): -1
#> LSphi: 8.8
#> LSnu (cell 1): -6.31822
#> LStheta (batch 1): -1.8
#> -----------------------------------------------------
#> Iteration 1120 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 621.593
#> delta (gene 1): 0.830716
#> phi (cell 1): 0.646653
#> s (cell 1): 0.423775
#> nu (cell 1): 0.423568
#> theta (batch 1): 0.0834497
#> betas:    0.7945  -0.1595   1.3688   0.9292   0.6535   0.9528   0.3051   0.6463   0.1316   0.1720  -0.6054   0.4037
#> 
#> sigma: 0.142972
#> lambda (gene 1): 1.44714
#> epsilon (gene 1): 0.137464
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2
#> LSdelta (gene 1): -1
#> LSphi: 8.8
#> LSnu (cell 1): -6.31822
#> LStheta (batch 1): -1.8
#> -----------------------------------------------------
#> Iteration 1140 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 793.168
#> delta (gene 1): 0.854839
#> phi (cell 1): 0.683607
#> s (cell 1): 0.686585
#> nu (cell 1): 0.412168
#> theta (batch 1): 0.15167
#> betas:    0.8392  -0.0684   0.3868   1.2738   0.4617   0.4112   0.8668   0.0491  -0.1187   0.3628  -0.7900  -0.2030
#> 
#> sigma: 0.206803
#> lambda (gene 1): 1.39393
#> epsilon (gene 1): -0.0444602
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2
#> LSdelta (gene 1): -1
#> LSphi: 8.8
#> LSnu (cell 1): -6.31822
#> LStheta (batch 1): -1.8
#> -----------------------------------------------------
#> Iteration 1160 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 804.472
#> delta (gene 1): 0.697458
#> phi (cell 1): 0.709274
#> s (cell 1): 0.437922
#> nu (cell 1): 0.424615
#> theta (batch 1): 0.054089
#> betas:    0.6975  -0.0923   0.9728   0.5859   0.5449   0.8225   0.2736   0.2855   0.2295  -0.2193  -0.0866  -0.2944
#> 
#> sigma: 0.13888
#> lambda (gene 1): 3.32549
#> epsilon (gene 1): -0.240774
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.1
#> LSdelta (gene 1): -1.1
#> LSphi: 8.7
#> LSnu (cell 1): -6.21822
#> LStheta (batch 1): -1.7
#> -----------------------------------------------------
#> Iteration 1180 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 776.084
#> delta (gene 1): 0.629867
#> phi (cell 1): 0.693223
#> s (cell 1): 0.515936
#> nu (cell 1): 0.435242
#> theta (batch 1): 0.562321
#> betas:    1.1133  -0.1419   0.1836   0.3408   0.7949   0.8281  -0.0406   0.3287   0.4249  -0.9232   0.2344  -0.3340
#> 
#> sigma: 0.147938
#> lambda (gene 1): 1.26493
#> epsilon (gene 1): -0.104356
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.1
#> LSdelta (gene 1): -1.1
#> LSphi: 8.7
#> LSnu (cell 1): -6.21822
#> LStheta (batch 1): -1.7
#> -----------------------------------------------------
#> Iteration 1200 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 736.946
#> delta (gene 1): 0.570635
#> phi (cell 1): 0.722897
#> s (cell 1): 0.675797
#> nu (cell 1): 0.430976
#> theta (batch 1): 0.451448
#> betas:    1.2230  -0.2017   0.3999   0.8816   0.4857   1.0746  -0.1528   0.5318   0.3859  -0.4172  -0.1372   0.1279
#> 
#> sigma: 0.152779
#> lambda (gene 1): 1.13874
#> epsilon (gene 1): -0.242877
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.2
#> LSdelta (gene 1): -1.2
#> LSphi: 8.6
#> LSnu (cell 1): -6.11822
#> LStheta (batch 1): -1.8
#> -----------------------------------------------------
#> Iteration 1220 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 754.648
#> delta (gene 1): 0.560472
#> phi (cell 1): 0.720945
#> s (cell 1): 0.560709
#> nu (cell 1): 0.428232
#> theta (batch 1): 0.316404
#> betas:    1.1500  -0.0832   0.5059   0.3107   0.9029   0.5146   0.2197   0.0500   0.1598  -0.0191  -0.8671  -0.1969
#> 
#> sigma: 0.160902
#> lambda (gene 1): 2.70132
#> epsilon (gene 1): -0.372797
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.2
#> LSdelta (gene 1): -1.2
#> LSphi: 8.6
#> LSnu (cell 1): -6.11822
#> LStheta (batch 1): -1.8
#> -----------------------------------------------------
#> Iteration 1240 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 778.061
#> delta (gene 1): 0.951134
#> phi (cell 1): 0.724203
#> s (cell 1): 0.483046
#> nu (cell 1): 0.424833
#> theta (batch 1): 0.435967
#> betas:    0.6153  -0.0636   0.5644   1.3046   0.6351   1.0517   0.3143   0.3932   0.0860  -0.0545  -0.4018  -0.0307
#> 
#> sigma: 0.169676
#> lambda (gene 1): 0.972218
#> epsilon (gene 1): 0.0895024
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.2
#> LSdelta (gene 1): -1.2
#> LSphi: 8.6
#> LSnu (cell 1): -6.11822
#> LStheta (batch 1): -1.8
#> -----------------------------------------------------
#> Iteration 1260 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 642.979
#> delta (gene 1): 0.617027
#> phi (cell 1): 0.807762
#> s (cell 1): 3.63308
#> nu (cell 1): 0.418652
#> theta (batch 1): 0.43119
#> betas:    0.8452  -0.0508   0.6978   0.3671   1.0121   0.4820   0.2436   0.0575   0.2898  -0.5366  -0.1860  -0.8013
#> 
#> sigma: 0.151264
#> lambda (gene 1): 1.23261
#> epsilon (gene 1): -0.285548
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.3
#> LSdelta (gene 1): -1.3
#> LSphi: 8.5
#> LSnu (cell 1): -6.01822
#> LStheta (batch 1): -1.9
#> -----------------------------------------------------
#> Iteration 1280 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 603.818
#> delta (gene 1): 0.764581
#> phi (cell 1): 0.804347
#> s (cell 1): 1.05488
#> nu (cell 1): 0.411662
#> theta (batch 1): 0.737403
#> betas:    1.0789  -0.1377   0.4705   0.1983   1.1333   0.4710   0.3336   0.1590   0.0576  -0.0601  -0.3171  -0.0280
#> 
#> sigma: 0.115097
#> lambda (gene 1): 1.00615
#> epsilon (gene 1): -0.217319
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.3
#> LSdelta (gene 1): -1.3
#> LSphi: 8.5
#> LSnu (cell 1): -6.01822
#> LStheta (batch 1): -1.9
#> -----------------------------------------------------
#> Iteration 1300 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 812.007
#> delta (gene 1): 0.565567
#> phi (cell 1): 0.701164
#> s (cell 1): 0.5006
#> nu (cell 1): 0.427138
#> theta (batch 1): 0.373973
#> betas:    0.6830  -0.1047   0.6831   1.4016   0.6222   0.5019  -0.0416   0.7757   0.1215  -0.3311   0.3396  -0.5022
#> 
#> sigma: 0.182196
#> lambda (gene 1): 0.463853
#> epsilon (gene 1): -0.524647
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.2
#> LSphi: 8.4
#> LSnu (cell 1): -5.91822
#> LStheta (batch 1): -1.8
#> -----------------------------------------------------
#> Iteration 1320 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 677.499
#> delta (gene 1): 0.676265
#> phi (cell 1): 0.719676
#> s (cell 1): 0.549148
#> nu (cell 1): 0.429797
#> theta (batch 1): 0.248768
#> betas:    0.8147  -0.0625   0.5522   0.3302   1.0598   0.4410   0.4397   0.2168  -0.3065  -0.0445  -0.5412  -0.3555
#> 
#> sigma: 0.132604
#> lambda (gene 1): 0.775571
#> epsilon (gene 1): -0.0328217
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.2
#> LSphi: 8.4
#> LSnu (cell 1): -5.91822
#> LStheta (batch 1): -1.8
#> -----------------------------------------------------
#> Iteration 1340 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 833.508
#> delta (gene 1): 0.998144
#> phi (cell 1): 0.716289
#> s (cell 1): 0.491407
#> nu (cell 1): 0.405501
#> theta (batch 1): 0.357384
#> betas:    0.8266  -0.2118   0.7581   0.6100   0.6405   0.8152   0.6945   0.3099   0.2025   0.2973  -0.4207   0.8661
#> 
#> sigma: 0.170371
#> lambda (gene 1): 1.84544
#> epsilon (gene 1): 0.160688
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.2
#> LSphi: 8.4
#> LSnu (cell 1): -5.91822
#> LStheta (batch 1): -1.8
#> -----------------------------------------------------
#> Iteration 1360 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 1046.44
#> delta (gene 1): 0.604342
#> phi (cell 1): 0.717365
#> s (cell 1): 0.263729
#> nu (cell 1): 0.430588
#> theta (batch 1): 0.320478
#> betas:    1.5887  -0.2518   0.2001   0.5614   0.4293   0.5321   0.4351   0.2112   0.1463   0.0127  -0.6515   0.3242
#> 
#> sigma: 0.151914
#> lambda (gene 1): 2.80238
#> epsilon (gene 1): -0.156087
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.5
#> LSdelta (gene 1): -1.3
#> LSphi: 8.3
#> LSnu (cell 1): -6.01822
#> LStheta (batch 1): -1.7
#> -----------------------------------------------------
#> Iteration 1380 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 568.716
#> delta (gene 1): 0.799811
#> phi (cell 1): 0.738973
#> s (cell 1): 0.541375
#> nu (cell 1): 0.414271
#> theta (batch 1): 0.10862
#> betas:    0.9737  -0.2365   0.4949   0.8014   1.0662   0.2959   0.9792   0.0392   0.4992  -0.2806   0.3365   0.0971
#> 
#> sigma: 0.196339
#> lambda (gene 1): 0.661097
#> epsilon (gene 1): 0.00936918
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.5
#> LSdelta (gene 1): -1.3
#> LSphi: 8.3
#> LSnu (cell 1): -6.01822
#> LStheta (batch 1): -1.7
#> -----------------------------------------------------
#> Iteration 1400 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 679.612
#> delta (gene 1): 0.82492
#> phi (cell 1): 0.718328
#> s (cell 1): 0.549443
#> nu (cell 1): 0.426938
#> theta (batch 1): 0.30458
#> betas:    0.2160   0.1167   0.3426   1.1196   0.4321   0.8878   0.6535  -0.2866   0.2543  -0.6064  -0.7158  -0.4168
#> 
#> sigma: 0.137629
#> lambda (gene 1): 2.01123
#> epsilon (gene 1): 0.104146
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.2
#> LSphi: 8.2
#> LSnu (cell 1): -5.91822
#> LStheta (batch 1): -1.6
#> -----------------------------------------------------
#> Iteration 1420 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 652.73
#> delta (gene 1): 0.658058
#> phi (cell 1): 0.707533
#> s (cell 1): 1.59535
#> nu (cell 1): 0.415131
#> theta (batch 1): 0.282955
#> betas:    0.3166  -0.0550   1.2163  -0.2062   1.0306   0.9680   0.5391   0.1930   0.0799  -0.0382  -0.0876  -0.2815
#> 
#> sigma: 0.190694
#> lambda (gene 1): 0.957058
#> epsilon (gene 1): -0.195169
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.2
#> LSphi: 8.2
#> LSnu (cell 1): -5.91822
#> LStheta (batch 1): -1.6
#> -----------------------------------------------------
#> Iteration 1440 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 658.774
#> delta (gene 1): 1.15565
#> phi (cell 1): 0.770987
#> s (cell 1): 0.390202
#> nu (cell 1): 0.421879
#> theta (batch 1): 0.165539
#> betas:    0.6711  -0.1539   0.3204   0.7001   1.4375   0.2675   0.8454   0.2001   0.4825   0.0092  -0.3039   0.2520
#> 
#> sigma: 0.213851
#> lambda (gene 1): 1.1019
#> epsilon (gene 1): 0.399643
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.2
#> LSphi: 8.2
#> LSnu (cell 1): -5.91822
#> LStheta (batch 1): -1.6
#> -----------------------------------------------------
#> Iteration 1460 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 631.907
#> delta (gene 1): 0.590279
#> phi (cell 1): 0.804024
#> s (cell 1): 0.289093
#> nu (cell 1): 0.434444
#> theta (batch 1): 0.300745
#> betas:    1.2324  -0.2214  -0.1098   0.6435   0.3063   0.9103   0.1286   0.5453   0.0134   0.0059  -0.1133   0.1650
#> 
#> sigma: 0.14816
#> lambda (gene 1): 0.500019
#> epsilon (gene 1): -0.423073
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.3
#> LSdelta (gene 1): -1.1
#> LSphi: 8.1
#> LSnu (cell 1): -5.81822
#> LStheta (batch 1): -1.5
#> -----------------------------------------------------
#> Iteration 1480 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 720.814
#> delta (gene 1): 0.811666
#> phi (cell 1): 0.760653
#> s (cell 1): 0.243504
#> nu (cell 1): 0.433343
#> theta (batch 1): 0.589624
#> betas:    1.0537  -0.1774  -0.3520   0.5960   1.2959  -0.0226   0.7714   0.0121   0.7281  -0.8085   0.0119   0.0443
#> 
#> sigma: 0.219353
#> lambda (gene 1): 1.46467
#> epsilon (gene 1): 0.182109
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.3
#> LSdelta (gene 1): -1.1
#> LSphi: 8.1
#> LSnu (cell 1): -5.81822
#> LStheta (batch 1): -1.5
#> -----------------------------------------------------
#> Iteration 1500 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 765.206
#> delta (gene 1): 0.594397
#> phi (cell 1): 0.62509
#> s (cell 1): 0.349992
#> nu (cell 1): 0.431662
#> theta (batch 1): 0.258653
#> betas:    0.7679  -0.1058   0.7015   0.4304   0.8284   0.6290   0.1584   0.9066  -0.6232   0.2317  -0.0399  -0.6330
#> 
#> sigma: 0.139253
#> lambda (gene 1): 0.537802
#> epsilon (gene 1): -0.431221
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.2
#> LSphi: 8
#> LSnu (cell 1): -5.91822
#> LStheta (batch 1): -1.4
#> -----------------------------------------------------
#> Iteration 1520 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 752.24
#> delta (gene 1): 0.759991
#> phi (cell 1): 0.624734
#> s (cell 1): 0.615933
#> nu (cell 1): 0.429083
#> theta (batch 1): 0.14049
#> betas:    0.5879  -0.0050   1.0159   0.7980   1.0872  -0.0071   0.1610   0.4704   0.0122  -0.6489  -0.1141  -0.4800
#> 
#> sigma: 0.16688
#> lambda (gene 1): 2.42233
#> epsilon (gene 1): -0.109175
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.2
#> LSphi: 8
#> LSnu (cell 1): -5.91822
#> LStheta (batch 1): -1.4
#> -----------------------------------------------------
#> Iteration 1540 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 672.661
#> delta (gene 1): 0.654832
#> phi (cell 1): 0.673729
#> s (cell 1): 0.739511
#> nu (cell 1): 0.43916
#> theta (batch 1): 0.227748
#> betas:    1.0908  -0.1704   1.2415   0.3378   0.9018   0.4736   0.4675  -0.0291   0.3743  -0.3952   0.0040  -0.0134
#> 
#> sigma: 0.139373
#> lambda (gene 1): 0.267101
#> epsilon (gene 1): -0.2769
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.2
#> LSphi: 8
#> LSnu (cell 1): -5.91822
#> LStheta (batch 1): -1.4
#> -----------------------------------------------------
#> Iteration 1560 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 840.932
#> delta (gene 1): 0.688165
#> phi (cell 1): 0.733378
#> s (cell 1): 0.551345
#> nu (cell 1): 0.408413
#> theta (batch 1): 0.229235
#> betas:    1.3538  -0.2569   1.0572   0.8099   0.2630   0.6227   0.6961   0.3293  -0.2161   0.4294  -0.0421  -0.4567
#> 
#> sigma: 0.206399
#> lambda (gene 1): 1.84526
#> epsilon (gene 1): -0.277565
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.3
#> LSdelta (gene 1): -1.3
#> LSphi: 7.9
#> LSnu (cell 1): -6.01822
#> LStheta (batch 1): -1.3
#> -----------------------------------------------------
#> Iteration 1580 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 742.626
#> delta (gene 1): 1.10493
#> phi (cell 1): 0.685123
#> s (cell 1): 0.304877
#> nu (cell 1): 0.436138
#> theta (batch 1): 0.245565
#> betas:    0.3773  -0.0052   0.5290   0.7136   0.7198   1.1618  -0.2787   0.7606  -0.2081  -0.4058  -0.0440  -0.5973
#> 
#> sigma: 0.163352
#> lambda (gene 1): 0.234357
#> epsilon (gene 1): 0.327459
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.3
#> LSdelta (gene 1): -1.3
#> LSphi: 7.9
#> LSnu (cell 1): -6.01822
#> LStheta (batch 1): -1.3
#> -----------------------------------------------------
#> Iteration 1600 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 672.79
#> delta (gene 1): 0.619995
#> phi (cell 1): 0.695418
#> s (cell 1): 0.354708
#> nu (cell 1): 0.40913
#> theta (batch 1): 0.139736
#> betas:    0.8592  -0.1693   0.2857   0.9816   0.9831   0.2233   0.7425   0.1908   0.7687  -1.0448   0.5971   0.0311
#> 
#> sigma: 0.212939
#> lambda (gene 1): 1.05188
#> epsilon (gene 1): -0.22639
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.2
#> LSphi: 7.8
#> LSnu (cell 1): -6.11822
#> LStheta (batch 1): -1.2
#> -----------------------------------------------------
#> Iteration 1620 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 629.229
#> delta (gene 1): 0.647719
#> phi (cell 1): 0.674468
#> s (cell 1): 0.379988
#> nu (cell 1): 0.419819
#> theta (batch 1): 0.0995592
#> betas:    0.7974  -0.0414   0.3568   0.9823   0.3124   0.6068   0.6958  -0.3763   0.0218  -0.1422  -0.3798  -0.7201
#> 
#> sigma: 0.156666
#> lambda (gene 1): 1.17981
#> epsilon (gene 1): -0.295767
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.2
#> LSphi: 7.8
#> LSnu (cell 1): -6.11822
#> LStheta (batch 1): -1.2
#> -----------------------------------------------------
#> Iteration 1640 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 740.601
#> delta (gene 1): 0.637581
#> phi (cell 1): 0.657727
#> s (cell 1): 0.260026
#> nu (cell 1): 0.422469
#> theta (batch 1): 0.313503
#> betas:    0.7957  -0.1184   0.3590   0.8952   0.3759   0.9178   0.3235   0.2398   0.2127  -0.0437  -0.2822   0.0688
#> 
#> sigma: 0.189334
#> lambda (gene 1): 0.168359
#> epsilon (gene 1): -0.448651
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.2
#> LSphi: 7.8
#> LSnu (cell 1): -6.11822
#> LStheta (batch 1): -1.2
#> -----------------------------------------------------
#> Iteration 1660 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 704.073
#> delta (gene 1): 0.50707
#> phi (cell 1): 0.622009
#> s (cell 1): 0.813787
#> nu (cell 1): 0.416395
#> theta (batch 1): 0.42891
#> betas:    0.2340   0.0108   0.7606   0.6574   0.3792   1.0641   0.3155   0.6677  -0.1967  -0.3685  -0.3262  -0.0421
#> 
#> sigma: 0.184721
#> lambda (gene 1): 1.4745
#> epsilon (gene 1): -0.387286
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.5
#> LSdelta (gene 1): -1.3
#> LSphi: 7.7
#> LSnu (cell 1): -6.21822
#> LStheta (batch 1): -1.1
#> -----------------------------------------------------
#> Iteration 1680 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 611.629
#> delta (gene 1): 0.805595
#> phi (cell 1): 0.650249
#> s (cell 1): 0.75667
#> nu (cell 1): 0.420679
#> theta (batch 1): 0.128439
#> betas:   -0.0273   0.0361   0.4475   0.8219   0.7132   0.9829   0.6326   0.1006  -0.0348   0.2230  -0.9783  -0.2336
#> 
#> sigma: 0.165938
#> lambda (gene 1): 3.01984
#> epsilon (gene 1): 0.13644
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.5
#> LSdelta (gene 1): -1.3
#> LSphi: 7.7
#> LSnu (cell 1): -6.21822
#> LStheta (batch 1): -1.1
#> -----------------------------------------------------
#> Iteration 1700 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 759.8
#> delta (gene 1): 0.622433
#> phi (cell 1): 0.735124
#> s (cell 1): 0.557044
#> nu (cell 1): 0.428804
#> theta (batch 1): 0.328575
#> betas:    0.9756  -0.0430   0.5799   0.3892   0.5948   0.2913   0.8371  -0.2687  -0.3293   0.0183  -0.5006  -0.8147
#> 
#> sigma: 0.213429
#> lambda (gene 1): 0.905107
#> epsilon (gene 1): -0.292827
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.4
#> LSphi: 7.6
#> LSnu (cell 1): -6.31822
#> LStheta (batch 1): -1.2
#> -----------------------------------------------------
#> Iteration 1720 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 712.724
#> delta (gene 1): 0.576032
#> phi (cell 1): 0.723926
#> s (cell 1): 0.503848
#> nu (cell 1): 0.421915
#> theta (batch 1): 0.152791
#> betas:    0.2009   0.0086   0.9926   1.0558   0.0833   0.9615   0.5475  -0.1144   0.1779  -0.1266  -0.4015  -0.2847
#> 
#> sigma: 0.162599
#> lambda (gene 1): 0.616919
#> epsilon (gene 1): -0.376244
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.4
#> LSphi: 7.6
#> LSnu (cell 1): -6.31822
#> LStheta (batch 1): -1.2
#> -----------------------------------------------------
#> Iteration 1740 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 802.993
#> delta (gene 1): 0.756028
#> phi (cell 1): 0.737131
#> s (cell 1): 0.78622
#> nu (cell 1): 0.429117
#> theta (batch 1): 0.0907174
#> betas:   -0.0237   0.1066   0.5414   0.3622   1.4482   0.4029   0.4613  -0.0194   0.1167  -0.5428  -0.7543  -0.2973
#> 
#> sigma: 0.156326
#> lambda (gene 1): 0.847854
#> epsilon (gene 1): 0.189931
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.4
#> LSphi: 7.6
#> LSnu (cell 1): -6.31822
#> LStheta (batch 1): -1.2
#> -----------------------------------------------------
#> Iteration 1760 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 945.675
#> delta (gene 1): 0.584723
#> phi (cell 1): 0.765217
#> s (cell 1): 0.547117
#> nu (cell 1): 0.417447
#> theta (batch 1): 0.228165
#> betas:    1.5956  -0.1996   0.6951   0.6173   0.2074   0.7012   0.0581   0.2676  -0.3303   0.0233  -0.4204  -0.2175
#> 
#> sigma: 0.158333
#> lambda (gene 1): 0.875729
#> epsilon (gene 1): -0.306509
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.3
#> LSdelta (gene 1): -1.3
#> LSphi: 7.5
#> LSnu (cell 1): -6.21822
#> LStheta (batch 1): -1.3
#> -----------------------------------------------------
#> Iteration 1780 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 531.061
#> delta (gene 1): 0.727407
#> phi (cell 1): 0.746874
#> s (cell 1): 0.343098
#> nu (cell 1): 0.425018
#> theta (batch 1): 0.264762
#> betas:    0.7825  -0.0122   0.2996   1.0679   0.8094  -0.0157   0.5057  -0.0279   0.1756  -0.1850  -0.6788  -0.6760
#> 
#> sigma: 0.1597
#> lambda (gene 1): 2.41923
#> epsilon (gene 1): -0.227302
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.3
#> LSdelta (gene 1): -1.3
#> LSphi: 7.5
#> LSnu (cell 1): -6.21822
#> LStheta (batch 1): -1.3
#> -----------------------------------------------------
#> Iteration 1800 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 647.695
#> delta (gene 1): 0.598974
#> phi (cell 1): 0.759303
#> s (cell 1): 1.44081
#> nu (cell 1): 0.429856
#> theta (batch 1): 0.381063
#> betas:    0.5552  -0.0681   0.3037   0.6349   1.2781   0.3862   0.2674   0.2231   0.0792  -0.1725  -0.4439   0.0128
#> 
#> sigma: 0.173945
#> lambda (gene 1): 0.549643
#> epsilon (gene 1): -0.281575
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.2
#> LSdelta (gene 1): -1.4
#> LSphi: 7.4
#> LSnu (cell 1): -6.31822
#> LStheta (batch 1): -1.2
#> -----------------------------------------------------
#> Iteration 1820 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 649.778
#> delta (gene 1): 0.59596
#> phi (cell 1): 0.744051
#> s (cell 1): 0.427317
#> nu (cell 1): 0.422018
#> theta (batch 1): 0.147812
#> betas:    0.9404  -0.0935   0.1344   0.7990   0.7676   0.4819   0.5563   0.0237   0.0490  -0.0071  -0.6404  -0.1099
#> 
#> sigma: 0.130244
#> lambda (gene 1): 1.30198
#> epsilon (gene 1): -0.448231
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.2
#> LSdelta (gene 1): -1.4
#> LSphi: 7.4
#> LSnu (cell 1): -6.31822
#> LStheta (batch 1): -1.2
#> -----------------------------------------------------
#> Iteration 1840 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 829.756
#> delta (gene 1): 0.602195
#> phi (cell 1): 0.746001
#> s (cell 1): 0.642623
#> nu (cell 1): 0.427305
#> theta (batch 1): 0.388523
#> betas:    0.4159  -0.0454   0.2717   1.0212   1.1394   0.6989   0.4308  -0.0916   0.4598  -0.1255  -0.3264  -0.3751
#> 
#> sigma: 0.141421
#> lambda (gene 1): 0.31791
#> epsilon (gene 1): -0.521516
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.2
#> LSdelta (gene 1): -1.4
#> LSphi: 7.4
#> LSnu (cell 1): -6.31822
#> LStheta (batch 1): -1.2
#> -----------------------------------------------------
#> Iteration 1860 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 750.964
#> delta (gene 1): 0.935934
#> phi (cell 1): 0.673258
#> s (cell 1): 0.515231
#> nu (cell 1): 0.422086
#> theta (batch 1): 0.265189
#> betas:    0.5980  -0.0353   0.4138   0.9473   1.0796  -0.0349   0.2669   0.3153   0.4180  -0.6805  -0.0424  -0.4786
#> 
#> sigma: 0.178286
#> lambda (gene 1): 0.260751
#> epsilon (gene 1): 0.0261946
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.3
#> LSdelta (gene 1): -1.5
#> LSphi: 7.3
#> LSnu (cell 1): -6.21822
#> LStheta (batch 1): -1.3
#> -----------------------------------------------------
#> Iteration 1880 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 671.792
#> delta (gene 1): 0.666414
#> phi (cell 1): 0.712222
#> s (cell 1): 0.380761
#> nu (cell 1): 0.420967
#> theta (batch 1): 0.254424
#> betas:    0.9223  -0.0644   0.3828   1.0243   0.6599   0.6597  -0.0504  -0.1053   0.5186  -0.7820   0.1834  -0.7073
#> 
#> sigma: 0.12415
#> lambda (gene 1): 1.46701
#> epsilon (gene 1): -0.41261
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.3
#> LSdelta (gene 1): -1.5
#> LSphi: 7.3
#> LSnu (cell 1): -6.21822
#> LStheta (batch 1): -1.3
#> -----------------------------------------------------
#> Iteration 1900 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 722.183
#> delta (gene 1): 0.684336
#> phi (cell 1): 0.763982
#> s (cell 1): 0.51989
#> nu (cell 1): 0.43608
#> theta (batch 1): 0.0778678
#> betas:    1.3397  -0.1619   0.2268   0.8363   0.1340   0.7075   0.1899   0.5189  -0.2714  -0.1667  -0.3234   0.0423
#> 
#> sigma: 0.165004
#> lambda (gene 1): 0.713746
#> epsilon (gene 1): -0.173625
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.2
#> LSdelta (gene 1): -1.4
#> LSphi: 7.2
#> LSnu (cell 1): -6.31822
#> LStheta (batch 1): -1.4
#> -----------------------------------------------------
#> Iteration 1920 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 604.985
#> delta (gene 1): 0.454133
#> phi (cell 1): 0.70403
#> s (cell 1): 0.446702
#> nu (cell 1): 0.42211
#> theta (batch 1): 0.129673
#> betas:    0.2626  -0.1570   1.1581  -0.1901   0.6994   1.5453   0.4590   0.3270   0.7451   0.2992  -0.6396   0.6724
#> 
#> sigma: 0.165253
#> lambda (gene 1): 1.14547
#> epsilon (gene 1): -0.506586
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.2
#> LSdelta (gene 1): -1.4
#> LSphi: 7.2
#> LSnu (cell 1): -6.31822
#> LStheta (batch 1): -1.4
#> -----------------------------------------------------
#> Iteration 1940 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 688.095
#> delta (gene 1): 0.684054
#> phi (cell 1): 0.793785
#> s (cell 1): 0.537637
#> nu (cell 1): 0.42105
#> theta (batch 1): 0.185443
#> betas:    1.2108  -0.1313   0.4768   0.0970   1.2205  -0.2065   0.7647   0.3496  -0.3888   0.1166  -0.7426   0.0746
#> 
#> sigma: 0.171825
#> lambda (gene 1): 1.38433
#> epsilon (gene 1): -0.102125
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.2
#> LSdelta (gene 1): -1.4
#> LSphi: 7.2
#> LSnu (cell 1): -6.31822
#> LStheta (batch 1): -1.4
#> -----------------------------------------------------
#> Iteration 1960 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 752.675
#> delta (gene 1): 0.645534
#> phi (cell 1): 0.738499
#> s (cell 1): 0.60903
#> nu (cell 1): 0.409752
#> theta (batch 1): 0.0522116
#> betas:    0.3372  -0.0622  -0.4475   0.5279   0.7525   1.5377   0.4589   0.4728  -0.0265   0.1815  -0.2933  -0.2630
#> 
#> sigma: 0.127475
#> lambda (gene 1): 1.46241
#> epsilon (gene 1): -0.264724
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.3
#> LSdelta (gene 1): -1.3
#> LSphi: 7.1
#> LSnu (cell 1): -6.41822
#> LStheta (batch 1): -1.3
#> -----------------------------------------------------
#> Iteration 1980 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 757.127
#> delta (gene 1): 0.74548
#> phi (cell 1): 0.648838
#> s (cell 1): 0.392754
#> nu (cell 1): 0.421109
#> theta (batch 1): 0.0618186
#> betas:    0.6157  -0.0741   0.1605   0.6585   0.6665   1.2131   0.4361   0.4193  -0.1309   0.1222  -0.2803  -0.3689
#> 
#> sigma: 0.167583
#> lambda (gene 1): 2.8698
#> epsilon (gene 1): -0.171628
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.3
#> LSdelta (gene 1): -1.3
#> LSphi: 7.1
#> LSnu (cell 1): -6.41822
#> LStheta (batch 1): -1.3
#> -----------------------------------------------------
#> Iteration 2000 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 701.553
#> delta (gene 1): 0.998727
#> phi (cell 1): 0.632522
#> s (cell 1): 0.605726
#> nu (cell 1): 0.420683
#> theta (batch 1): 0.0987985
#> betas:    0.3646  -0.1481   0.4000   0.2639   1.0163   1.2044   0.3173   0.8409   0.2272  -0.1073   0.1958   0.2589
#> 
#> sigma: 0.168146
#> lambda (gene 1): 0.631481
#> epsilon (gene 1): 0.180488
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.4
#> LSphi: 7
#> LSnu (cell 1): -6.51822
#> LStheta (batch 1): -1.4
#> -----------------------------------------------------
#> Iteration 2020 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 831.276
#> delta (gene 1): 0.567679
#> phi (cell 1): 0.818522
#> s (cell 1): 0.613376
#> nu (cell 1): 0.415182
#> theta (batch 1): 0.267135
#> betas:    1.1860  -0.2065   0.2394   0.2392   0.8066   0.5532   0.6637   0.5518  -0.1651   0.0403  -0.3977   0.3544
#> 
#> sigma: 0.149999
#> lambda (gene 1): 1.25243
#> epsilon (gene 1): -0.243586
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.4
#> LSphi: 7
#> LSnu (cell 1): -6.51822
#> LStheta (batch 1): -1.4
#> -----------------------------------------------------
#> Iteration 2040 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 960.311
#> delta (gene 1): 0.504644
#> phi (cell 1): 0.973931
#> s (cell 1): 0.566536
#> nu (cell 1): 0.413067
#> theta (batch 1): 0.433263
#> betas:    0.6404   0.0308   0.9728   0.7012   0.8368   0.3603   0.8569  -0.0521  -0.1537  -0.2352  -0.3647  -0.8071
#> 
#> sigma: 0.178899
#> lambda (gene 1): 1.15611
#> epsilon (gene 1): -0.617089
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.4
#> LSphi: 7
#> LSnu (cell 1): -6.51822
#> LStheta (batch 1): -1.4
#> -----------------------------------------------------
#> Iteration 2060 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 662.177
#> delta (gene 1): 0.683584
#> phi (cell 1): 0.876432
#> s (cell 1): 0.357666
#> nu (cell 1): 0.419623
#> theta (batch 1): 0.378883
#> betas:    1.2893  -0.1296   0.7714  -0.0943   0.4735   0.8163   0.3264  -0.0389   0.1956  -0.0356  -0.5422  -0.3377
#> 
#> sigma: 0.141836
#> lambda (gene 1): 0.996907
#> epsilon (gene 1): -0.171027
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.5
#> LSdelta (gene 1): -1.5
#> LSphi: 6.9
#> LSnu (cell 1): -6.41822
#> LStheta (batch 1): -1.3
#> -----------------------------------------------------
#> Iteration 2080 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 621.897
#> delta (gene 1): 0.956426
#> phi (cell 1): 0.813453
#> s (cell 1): 0.693033
#> nu (cell 1): 0.430374
#> theta (batch 1): 0.332888
#> betas:    0.9696  -0.1848   0.8188   0.1382   0.9513   0.8114   0.8461   0.3966   0.2185  -0.3357   0.0633   0.0334
#> 
#> sigma: 0.138902
#> lambda (gene 1): 0.459882
#> epsilon (gene 1): 0.307814
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.5
#> LSdelta (gene 1): -1.5
#> LSphi: 6.9
#> LSnu (cell 1): -6.41822
#> LStheta (batch 1): -1.3
#> -----------------------------------------------------
#> Iteration 2100 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 632.419
#> delta (gene 1): 0.948901
#> phi (cell 1): 0.8108
#> s (cell 1): 0.5299
#> nu (cell 1): 0.414029
#> theta (batch 1): 0.239393
#> betas:    1.5223  -0.2277  -0.1849   0.1564   0.6982   0.3903   0.9104  -0.1692   0.2179  -0.0182  -0.2135  -0.1378
#> 
#> sigma: 0.239619
#> lambda (gene 1): 5.56161
#> epsilon (gene 1): 0.0834028
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.6
#> LSdelta (gene 1): -1.4
#> LSphi: 7
#> LSnu (cell 1): -6.31822
#> LStheta (batch 1): -1.4
#> -----------------------------------------------------
#> Iteration 2120 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 547.544
#> delta (gene 1): 0.540259
#> phi (cell 1): 0.72956
#> s (cell 1): 1.05165
#> nu (cell 1): 0.417442
#> theta (batch 1): 0.38631
#> betas:    0.7349  -0.0450   0.2812   0.0176   1.0542   0.4587   0.5680  -0.0319   0.3471  -0.5735  -0.4711  -0.1399
#> 
#> sigma: 0.131714
#> lambda (gene 1): 1.81513
#> epsilon (gene 1): -0.235348
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.6
#> LSdelta (gene 1): -1.4
#> LSphi: 7
#> LSnu (cell 1): -6.31822
#> LStheta (batch 1): -1.4
#> -----------------------------------------------------
#> Iteration 2140 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 772.771
#> delta (gene 1): 0.586361
#> phi (cell 1): 0.781454
#> s (cell 1): 0.369868
#> nu (cell 1): 0.428318
#> theta (batch 1): 0.500464
#> betas:    1.0981  -0.1275   0.3128   1.0098   0.8325   0.9630  -0.0690   0.4849  -0.2184  -0.1760   0.1936  -0.8092
#> 
#> sigma: 0.158197
#> lambda (gene 1): 1.1172
#> epsilon (gene 1): -0.425105
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.6
#> LSdelta (gene 1): -1.4
#> LSphi: 7
#> LSnu (cell 1): -6.31822
#> LStheta (batch 1): -1.4
#> -----------------------------------------------------
#> Iteration 2160 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 646.012
#> delta (gene 1): 0.540029
#> phi (cell 1): 0.796251
#> s (cell 1): 0.446617
#> nu (cell 1): 0.414636
#> theta (batch 1): 0.347264
#> betas:    0.9186  -0.1833   0.9416   0.5725   0.3462   0.9210   0.3133   0.7897   0.2895  -0.3208   0.0785  -0.0375
#> 
#> sigma: 0.144119
#> lambda (gene 1): 0.767074
#> epsilon (gene 1): -0.306266
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.5
#> LSdelta (gene 1): -1.5
#> LSphi: 6.9
#> LSnu (cell 1): -6.21822
#> LStheta (batch 1): -1.5
#> -----------------------------------------------------
#> Iteration 2180 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 838.673
#> delta (gene 1): 0.633181
#> phi (cell 1): 0.8996
#> s (cell 1): 0.44677
#> nu (cell 1): 0.417625
#> theta (batch 1): 0.253241
#> betas:    0.9102  -0.1275   0.0149   0.8534   0.6893   0.8204   0.3594   0.0593   0.3585  -0.5646   0.1323  -0.4134
#> 
#> sigma: 0.195934
#> lambda (gene 1): 0.283481
#> epsilon (gene 1): -0.114564
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.5
#> LSdelta (gene 1): -1.5
#> LSphi: 6.9
#> LSnu (cell 1): -6.21822
#> LStheta (batch 1): -1.5
#> -----------------------------------------------------
#> Iteration 2200 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 687.859
#> delta (gene 1): 0.916601
#> phi (cell 1): 0.842146
#> s (cell 1): 0.497657
#> nu (cell 1): 0.417586
#> theta (batch 1): 0.289632
#> betas:    0.4194  -0.0513   0.4112   0.8221   1.0876   0.4586   0.8106   0.2672   0.1521  -0.2230  -0.1244  -0.3115
#> 
#> sigma: 0.139818
#> lambda (gene 1): 0.891362
#> epsilon (gene 1): 0.191285
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 6.8
#> LSnu (cell 1): -6.11822
#> LStheta (batch 1): -1.4
#> -----------------------------------------------------
#> Iteration 2220 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 508.591
#> delta (gene 1): 0.85135
#> phi (cell 1): 0.787188
#> s (cell 1): 1.48081
#> nu (cell 1): 0.424092
#> theta (batch 1): 0.273143
#> betas:    0.7720  -0.0701   0.7044   1.6100   0.1583   0.4916   0.9153  -0.0992   0.4739  -0.7417   0.1609  -0.3759
#> 
#> sigma: 0.167756
#> lambda (gene 1): 0.536396
#> epsilon (gene 1): 0.0274062
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 6.8
#> LSnu (cell 1): -6.11822
#> LStheta (batch 1): -1.4
#> -----------------------------------------------------
#> Iteration 2240 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 811.573
#> delta (gene 1): 0.71085
#> phi (cell 1): 0.715645
#> s (cell 1): 0.412681
#> nu (cell 1): 0.438982
#> theta (batch 1): 0.216462
#> betas:    1.1863  -0.0316   0.2357   0.9190   0.5058   0.5508   0.0117   0.1931  -0.1631   0.0032  -0.9674  -0.6670
#> 
#> sigma: 0.183431
#> lambda (gene 1): 0.621767
#> epsilon (gene 1): -0.067719
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 6.8
#> LSnu (cell 1): -6.11822
#> LStheta (batch 1): -1.4
#> -----------------------------------------------------
#> Iteration 2260 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 738.019
#> delta (gene 1): 0.609241
#> phi (cell 1): 0.640411
#> s (cell 1): 0.770243
#> nu (cell 1): 0.418929
#> theta (batch 1): 0.279361
#> betas:    1.7000  -0.2336   0.1250   0.4214   0.3784   0.7634   0.0730   0.2022   0.1122  -0.1081  -0.3750   0.1719
#> 
#> sigma: 0.168704
#> lambda (gene 1): 0.873325
#> epsilon (gene 1): -0.363461
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.3
#> LSdelta (gene 1): -1.7
#> LSphi: 6.9
#> LSnu (cell 1): -6.01822
#> LStheta (batch 1): -1.3
#> -----------------------------------------------------
#> Iteration 2280 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 660.086
#> delta (gene 1): 0.666398
#> phi (cell 1): 0.719506
#> s (cell 1): 0.41701
#> nu (cell 1): 0.447328
#> theta (batch 1): 0.301985
#> betas:    0.7246  -0.1249   0.7557   0.2106   0.6828   0.9456   0.5702   0.0076   0.3071   0.0649  -0.2856   0.0373
#> 
#> sigma: 0.123727
#> lambda (gene 1): 1.08661
#> epsilon (gene 1): -0.291981
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.3
#> LSdelta (gene 1): -1.7
#> LSphi: 6.9
#> LSnu (cell 1): -6.01822
#> LStheta (batch 1): -1.3
#> -----------------------------------------------------
#> Iteration 2300 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 645.378
#> delta (gene 1): 0.849889
#> phi (cell 1): 0.759633
#> s (cell 1): 0.665975
#> nu (cell 1): 0.44947
#> theta (batch 1): 0.264676
#> betas:    1.0171  -0.0952   0.4753   0.5363   0.7097   0.7025   0.5191   0.2479  -0.4120   0.1396   0.0005  -0.7302
#> 
#> sigma: 0.152932
#> lambda (gene 1): 0.40235
#> epsilon (gene 1): -0.256104
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 6.8
#> LSnu (cell 1): -6.11822
#> LStheta (batch 1): -1.4
#> -----------------------------------------------------
#> Iteration 2320 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 570.939
#> delta (gene 1): 0.969342
#> phi (cell 1): 0.795594
#> s (cell 1): 0.304032
#> nu (cell 1): 0.426632
#> theta (batch 1): 0.181702
#> betas:    1.3266  -0.0677   0.3404  -0.0836   0.4497   0.6339   0.0635   0.1366   0.1980  -0.4793  -0.5711  -0.6132
#> 
#> sigma: 0.213126
#> lambda (gene 1): 0.948957
#> epsilon (gene 1): 0.115696
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 6.8
#> LSnu (cell 1): -6.11822
#> LStheta (batch 1): -1.4
#> -----------------------------------------------------
#> Iteration 2340 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 727.651
#> delta (gene 1): 0.636333
#> phi (cell 1): 0.9567
#> s (cell 1): 0.44052
#> nu (cell 1): 0.422599
#> theta (batch 1): 0.212931
#> betas:    0.8117  -0.2128   0.4243   0.7391   1.1595   0.2654   0.9370   0.4309  -0.0714   0.4887  -0.1927   0.0626
#> 
#> sigma: 0.165699
#> lambda (gene 1): 0.703813
#> epsilon (gene 1): -0.272405
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 6.8
#> LSnu (cell 1): -6.11822
#> LStheta (batch 1): -1.4
#> -----------------------------------------------------
#> Iteration 2360 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 753.739
#> delta (gene 1): 0.720275
#> phi (cell 1): 0.965182
#> s (cell 1): 0.582766
#> nu (cell 1): 0.420267
#> theta (batch 1): 0.147069
#> betas:    0.6706  -0.0709   0.3027   0.6444   0.6748   1.0535   0.3318   0.1643   0.1338  -0.0894  -0.1595  -0.4621
#> 
#> sigma: 0.176755
#> lambda (gene 1): 0.740472
#> epsilon (gene 1): -0.249117
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.5
#> LSdelta (gene 1): -1.5
#> LSphi: 6.9
#> LSnu (cell 1): -6.21822
#> LStheta (batch 1): -1.3
#> -----------------------------------------------------
#> Iteration 2380 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 831.454
#> delta (gene 1): 0.884712
#> phi (cell 1): 0.967225
#> s (cell 1): 0.518791
#> nu (cell 1): 0.413712
#> theta (batch 1): 0.061764
#> betas:    1.1944  -0.1393   0.2264   0.3257   1.1162   0.5958   0.0524   0.2719   0.0803  -0.3920  -0.2225   0.0709
#> 
#> sigma: 0.143545
#> lambda (gene 1): 1.19024
#> epsilon (gene 1): 0.0540676
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.5
#> LSdelta (gene 1): -1.5
#> LSphi: 6.9
#> LSnu (cell 1): -6.21822
#> LStheta (batch 1): -1.3
#> -----------------------------------------------------
#> Iteration 2400 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 621.868
#> delta (gene 1): 0.793508
#> phi (cell 1): 0.998704
#> s (cell 1): 0.430838
#> nu (cell 1): 0.423427
#> theta (batch 1): 0.0580407
#> betas:    0.6824   0.0307  -0.2171   0.8856   0.5567   0.8593   0.4634  -0.3759   0.4035  -0.6645  -0.5330  -0.4193
#> 
#> sigma: 0.200031
#> lambda (gene 1): 1.50763
#> epsilon (gene 1): -0.305559
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.4
#> LSphi: 6.8
#> LSnu (cell 1): -6.11822
#> LStheta (batch 1): -1.2
#> -----------------------------------------------------
#> Iteration 2420 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 779.447
#> delta (gene 1): 0.865957
#> phi (cell 1): 0.886216
#> s (cell 1): 0.538544
#> nu (cell 1): 0.418943
#> theta (batch 1): 0.0333373
#> betas:    1.0407  -0.1075   0.9555   0.8620  -0.2545   1.0806   0.4779  -0.2677   0.3806  -0.0253  -0.7823   0.1277
#> 
#> sigma: 0.186
#> lambda (gene 1): 2.99331
#> epsilon (gene 1): -0.323891
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.4
#> LSphi: 6.8
#> LSnu (cell 1): -6.11822
#> LStheta (batch 1): -1.2
#> -----------------------------------------------------
#> Iteration 2440 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 1014.92
#> delta (gene 1): 1.24768
#> phi (cell 1): 0.887238
#> s (cell 1): 0.653991
#> nu (cell 1): 0.434952
#> theta (batch 1): 0.11486
#> betas:    0.7988   0.0644   0.4856   0.6081   0.3014   0.4519   0.7184  -0.3011  -0.0128  -0.8007  -0.5304  -0.5476
#> 
#> sigma: 0.197667
#> lambda (gene 1): 1.33612
#> epsilon (gene 1): 0.277915
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.4
#> LSphi: 6.8
#> LSnu (cell 1): -6.11822
#> LStheta (batch 1): -1.2
#> -----------------------------------------------------
#> Iteration 2460 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 719.996
#> delta (gene 1): 0.670511
#> phi (cell 1): 0.814758
#> s (cell 1): 0.526673
#> nu (cell 1): 0.412102
#> theta (batch 1): 0.215348
#> betas:    1.5823  -0.2682   0.2693  -0.3151   0.6031   0.7406  -0.0095   0.2436   0.3334  -0.2074   0.2666  -0.1754
#> 
#> sigma: 0.162731
#> lambda (gene 1): 0.30142
#> epsilon (gene 1): -0.371116
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.3
#> LSdelta (gene 1): -1.3
#> LSphi: 6.7
#> LSnu (cell 1): -6.21822
#> LStheta (batch 1): -1.1
#> -----------------------------------------------------
#> Iteration 2480 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 621.242
#> delta (gene 1): 0.786384
#> phi (cell 1): 0.892032
#> s (cell 1): 0.862842
#> nu (cell 1): 0.419769
#> theta (batch 1): 0.258001
#> betas:    0.5358  -0.0898   0.7781   0.9007   0.7131   0.7846   0.4263   0.2539   0.1312   0.0670  -0.3583  -0.0884
#> 
#> sigma: 0.146726
#> lambda (gene 1): 2.19899
#> epsilon (gene 1): 0.00173689
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.3
#> LSdelta (gene 1): -1.3
#> LSphi: 6.7
#> LSnu (cell 1): -6.21822
#> LStheta (batch 1): -1.1
#> -----------------------------------------------------
#> Iteration 2500 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 782.813
#> delta (gene 1): 0.718578
#> phi (cell 1): 0.800714
#> s (cell 1): 0.828246
#> nu (cell 1): 0.416869
#> theta (batch 1): 0.209973
#> betas:    1.2054   0.0233  -0.3409   0.7312   0.1641   1.2744  -0.5003   0.4659  -0.7157   0.2730  -1.3398  -0.7768
#> 
#> sigma: 0.196758
#> lambda (gene 1): 0.591951
#> epsilon (gene 1): -0.00975186
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.2
#> LSdelta (gene 1): -1.4
#> LSphi: 6.8
#> LSnu (cell 1): -6.11822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 2520 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 763.881
#> delta (gene 1): 0.620685
#> phi (cell 1): 0.746921
#> s (cell 1): 0.253205
#> nu (cell 1): 0.424089
#> theta (batch 1): 0.421804
#> betas:    0.8585  -0.0243   1.4785   0.5556   0.5468  -0.0089   1.1927  -0.5458   0.2273  -0.1591  -0.7216  -0.6527
#> 
#> sigma: 0.160671
#> lambda (gene 1): 1.23081
#> epsilon (gene 1): -0.0642045
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.2
#> LSdelta (gene 1): -1.4
#> LSphi: 6.8
#> LSnu (cell 1): -6.11822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 2540 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 715.119
#> delta (gene 1): 1.00564
#> phi (cell 1): 0.795788
#> s (cell 1): 0.343154
#> nu (cell 1): 0.417369
#> theta (batch 1): 0.0887734
#> betas:    1.4106  -0.1186   0.5676   0.2108   1.1535   0.3364  -0.1024   0.2709  -0.0622   0.3774  -1.0936  -0.2434
#> 
#> sigma: 0.20527
#> lambda (gene 1): 0.874126
#> epsilon (gene 1): 0.230216
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.2
#> LSdelta (gene 1): -1.4
#> LSphi: 6.8
#> LSnu (cell 1): -6.11822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 2560 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 662.023
#> delta (gene 1): 0.525451
#> phi (cell 1): 0.832816
#> s (cell 1): 0.545927
#> nu (cell 1): 0.411685
#> theta (batch 1): 0.104993
#> betas:    0.3414   0.0049   1.0754   0.6597   1.0066   0.4221   0.6651  -0.0040   0.1473  -0.0087  -0.2448  -0.7500
#> 
#> sigma: 0.151063
#> lambda (gene 1): 0.721423
#> epsilon (gene 1): -0.649169
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.1
#> LSdelta (gene 1): -1.3
#> LSphi: 6.7
#> LSnu (cell 1): -6.01822
#> LStheta (batch 1): -0.9
#> -----------------------------------------------------
#> Iteration 2580 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 730.167
#> delta (gene 1): 0.834415
#> phi (cell 1): 0.792398
#> s (cell 1): 0.371772
#> nu (cell 1): 0.429632
#> theta (batch 1): 0.179065
#> betas:    1.1167  -0.1333   0.2884   0.4898   0.9793   0.5575   0.4091  -0.1523   0.5451  -0.3057  -0.1119  -0.2981
#> 
#> sigma: 0.174905
#> lambda (gene 1): 1.06597
#> epsilon (gene 1): -0.233679
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.1
#> LSdelta (gene 1): -1.3
#> LSphi: 6.7
#> LSnu (cell 1): -6.01822
#> LStheta (batch 1): -0.9
#> -----------------------------------------------------
#> Iteration 2600 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 624.049
#> delta (gene 1): 0.510827
#> phi (cell 1): 0.837935
#> s (cell 1): 0.472402
#> nu (cell 1): 0.422835
#> theta (batch 1): 0.0457781
#> betas:    0.5407  -0.0278   0.0823   1.0188   0.2013   0.9332   0.8505  -0.2020   0.2665  -0.4219  -0.3170  -0.1374
#> 
#> sigma: 0.174328
#> lambda (gene 1): 1.07699
#> epsilon (gene 1): -0.522237
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2
#> LSdelta (gene 1): -1.4
#> LSphi: 6.8
#> LSnu (cell 1): -6.11822
#> LStheta (batch 1): -0.8
#> -----------------------------------------------------
#> Iteration 2620 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 624.106
#> delta (gene 1): 0.696463
#> phi (cell 1): 0.795403
#> s (cell 1): 0.602482
#> nu (cell 1): 0.424287
#> theta (batch 1): 0.0309949
#> betas:    0.9635  -0.0560   0.6420   0.1389   0.8227   0.4757   0.3353   0.0971   0.0492  -0.3355  -0.4898  -0.4202
#> 
#> sigma: 0.184811
#> lambda (gene 1): 1.24316
#> epsilon (gene 1): -0.240861
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2
#> LSdelta (gene 1): -1.4
#> LSphi: 6.8
#> LSnu (cell 1): -6.11822
#> LStheta (batch 1): -0.8
#> -----------------------------------------------------
#> Iteration 2640 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 846.581
#> delta (gene 1): 0.89255
#> phi (cell 1): 0.915716
#> s (cell 1): 0.445626
#> nu (cell 1): 0.419536
#> theta (batch 1): 0.070808
#> betas:    0.7993  -0.0786   0.3550   1.0367   0.7669   0.1637   1.0823   0.0268  -0.3754   0.2453  -0.7138  -0.1535
#> 
#> sigma: 0.159919
#> lambda (gene 1): 1.51854
#> epsilon (gene 1): 0.109716
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2
#> LSdelta (gene 1): -1.4
#> LSphi: 6.8
#> LSnu (cell 1): -6.11822
#> LStheta (batch 1): -0.8
#> -----------------------------------------------------
#> Iteration 2660 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 465.617
#> delta (gene 1): 0.943887
#> phi (cell 1): 0.90021
#> s (cell 1): 0.445009
#> nu (cell 1): 0.418994
#> theta (batch 1): 0.0151478
#> betas:   -0.2065   0.2048   1.2167   1.0681   0.0541   0.5910   0.2117  -0.1486  -0.4900  -0.5284  -0.4595  -0.9041
#> 
#> sigma: 0.176947
#> lambda (gene 1): 0.476217
#> epsilon (gene 1): 0.131002
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.1
#> LSdelta (gene 1): -1.5
#> LSphi: 6.7
#> LSnu (cell 1): -6.01822
#> LStheta (batch 1): -0.7
#> -----------------------------------------------------
#> Iteration 2680 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 691.373
#> delta (gene 1): 0.700782
#> phi (cell 1): 0.761593
#> s (cell 1): 0.607472
#> nu (cell 1): 0.423674
#> theta (batch 1): 0.121265
#> betas:    0.7905  -0.0516   0.6653   1.0422   0.4291  -0.1521   0.5740   0.0274  -0.1390  -0.0583  -0.9448   0.3644
#> 
#> sigma: 0.156057
#> lambda (gene 1): 1.29918
#> epsilon (gene 1): -0.298907
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.1
#> LSdelta (gene 1): -1.5
#> LSphi: 6.7
#> LSnu (cell 1): -6.01822
#> LStheta (batch 1): -0.7
#> -----------------------------------------------------
#> Iteration 2700 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 711.72
#> delta (gene 1): 0.934163
#> phi (cell 1): 0.635977
#> s (cell 1): 0.463621
#> nu (cell 1): 0.413342
#> theta (batch 1): 0.320513
#> betas:    0.5174   0.0102   0.8245   0.4903   0.9085   0.3749   0.4797   0.1526   0.0864  -0.2923  -0.4969  -0.7449
#> 
#> sigma: 0.210703
#> lambda (gene 1): 1.27403
#> epsilon (gene 1): 0.04032
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2
#> LSdelta (gene 1): -1.4
#> LSphi: 6.8
#> LSnu (cell 1): -6.11822
#> LStheta (batch 1): -0.8
#> -----------------------------------------------------
#> Iteration 2720 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 797.406
#> delta (gene 1): 0.771811
#> phi (cell 1): 0.665287
#> s (cell 1): 0.60377
#> nu (cell 1): 0.413394
#> theta (batch 1): 0.296801
#> betas:    0.2573  -0.0187   0.6559   0.2080   0.7916   1.3471   0.3594  -0.0448   0.3714  -0.2866  -0.0823  -0.6865
#> 
#> sigma: 0.257276
#> lambda (gene 1): 1.60736
#> epsilon (gene 1): -0.167084
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2
#> LSdelta (gene 1): -1.4
#> LSphi: 6.8
#> LSnu (cell 1): -6.11822
#> LStheta (batch 1): -0.8
#> -----------------------------------------------------
#> Iteration 2740 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 646.724
#> delta (gene 1): 0.571596
#> phi (cell 1): 0.732891
#> s (cell 1): 0.850768
#> nu (cell 1): 0.425391
#> theta (batch 1): 0.109293
#> betas:    0.9204  -0.1397   0.1895   0.5817   0.3887   0.6406   0.5972   0.2853   0.1842  -0.1151  -0.3017  -0.1312
#> 
#> sigma: 0.15512
#> lambda (gene 1): 1.80439
#> epsilon (gene 1): -0.474918
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2
#> LSdelta (gene 1): -1.4
#> LSphi: 6.8
#> LSnu (cell 1): -6.11822
#> LStheta (batch 1): -0.8
#> -----------------------------------------------------
#> Iteration 2760 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 705.134
#> delta (gene 1): 1.14138
#> phi (cell 1): 0.787281
#> s (cell 1): 0.484111
#> nu (cell 1): 0.414741
#> theta (batch 1): 0.154984
#> betas:    0.1140   0.1782   1.1957   0.5115   1.0453   0.4066   0.1946   0.4853  -0.3793  -0.3033  -0.8122  -0.9043
#> 
#> sigma: 0.152966
#> lambda (gene 1): 1.1501
#> epsilon (gene 1): 0.293946
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.1
#> LSdelta (gene 1): -1.3
#> LSphi: 6.7
#> LSnu (cell 1): -6.21822
#> LStheta (batch 1): -0.9
#> -----------------------------------------------------
#> Iteration 2780 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 592.25
#> delta (gene 1): 0.578761
#> phi (cell 1): 0.667012
#> s (cell 1): 0.792359
#> nu (cell 1): 0.429083
#> theta (batch 1): 0.30791
#> betas:    0.7261   0.0164   0.4017   0.4604   0.5947   0.6842   0.3777   0.4874  -0.8978   0.2881  -0.8865  -0.4404
#> 
#> sigma: 0.186845
#> lambda (gene 1): 0.828371
#> epsilon (gene 1): -0.329311
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.1
#> LSdelta (gene 1): -1.3
#> LSphi: 6.7
#> LSnu (cell 1): -6.21822
#> LStheta (batch 1): -0.9
#> -----------------------------------------------------
#> Iteration 2800 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 702.7
#> delta (gene 1): 0.51441
#> phi (cell 1): 0.781232
#> s (cell 1): 0.633613
#> nu (cell 1): 0.420273
#> theta (batch 1): 0.301488
#> betas:    0.3346   0.1374   0.4348   0.0962   0.7079   0.6985   0.6280  -0.0929   0.1920  -0.5714  -0.7378  -0.9019
#> 
#> sigma: 0.148647
#> lambda (gene 1): 1.08695
#> epsilon (gene 1): -0.358138
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.2
#> LSdelta (gene 1): -1.2
#> LSphi: 6.6
#> LSnu (cell 1): -6.11822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 2820 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 626.426
#> delta (gene 1): 1.00164
#> phi (cell 1): 0.81343
#> s (cell 1): 0.42759
#> nu (cell 1): 0.42169
#> theta (batch 1): 0.258283
#> betas:    1.5592  -0.1561   0.1553   1.1051   0.6221   0.4130   0.2068   0.5669  -0.4742   0.2411  -0.6415  -0.3701
#> 
#> sigma: 0.137314
#> lambda (gene 1): 1.02655
#> epsilon (gene 1): 0.177754
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.2
#> LSdelta (gene 1): -1.2
#> LSphi: 6.6
#> LSnu (cell 1): -6.11822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 2840 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 730.793
#> delta (gene 1): 0.545878
#> phi (cell 1): 0.703321
#> s (cell 1): 0.526354
#> nu (cell 1): 0.430068
#> theta (batch 1): 0.113894
#> betas:    0.8161  -0.0405   0.4257   1.3121   0.1139   0.9007   0.4964  -0.2216   0.3864   0.3187  -1.0794  -0.1205
#> 
#> sigma: 0.19699
#> lambda (gene 1): 0.777038
#> epsilon (gene 1): -0.531465
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.2
#> LSdelta (gene 1): -1.2
#> LSphi: 6.6
#> LSnu (cell 1): -6.11822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 2860 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 848.251
#> delta (gene 1): 0.797412
#> phi (cell 1): 0.682874
#> s (cell 1): 0.259012
#> nu (cell 1): 0.406491
#> theta (batch 1): 0.0474569
#> betas:    0.7621  -0.0191   0.5741  -0.1600   1.1386   0.6249   0.1052   0.3878  -0.0970  -0.3914  -0.4368  -0.5151
#> 
#> sigma: 0.151689
#> lambda (gene 1): 1.45087
#> epsilon (gene 1): -0.091433
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.3
#> LSdelta (gene 1): -1.3
#> LSphi: 6.7
#> LSnu (cell 1): -6.01822
#> LStheta (batch 1): -1.1
#> -----------------------------------------------------
#> Iteration 2880 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 759.479
#> delta (gene 1): 0.829324
#> phi (cell 1): 0.579978
#> s (cell 1): 0.480027
#> nu (cell 1): 0.424579
#> theta (batch 1): 0.090351
#> betas:    0.6288  -0.0165   0.5311   1.3185   0.4421   0.8238   0.3437   0.0206   0.0048  -0.4302  -0.1117  -0.6236
#> 
#> sigma: 0.154051
#> lambda (gene 1): 1.63976
#> epsilon (gene 1): -0.0844617
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.3
#> LSdelta (gene 1): -1.3
#> LSphi: 6.7
#> LSnu (cell 1): -6.01822
#> LStheta (batch 1): -1.1
#> -----------------------------------------------------
#> Iteration 2900 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 613.054
#> delta (gene 1): 0.700363
#> phi (cell 1): 0.546248
#> s (cell 1): 0.67792
#> nu (cell 1): 0.419824
#> theta (batch 1): 0.248861
#> betas:    1.4626  -0.1415   0.4896  -0.6622   0.8470   0.4746   0.2474   0.0437   0.0668   0.0018  -0.8281  -0.2569
#> 
#> sigma: 0.190403
#> lambda (gene 1): 0.583495
#> epsilon (gene 1): -0.493944
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.2
#> LSdelta (gene 1): -1.4
#> LSphi: 6.8
#> LSnu (cell 1): -5.91822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 2920 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 553.175
#> delta (gene 1): 1.36972
#> phi (cell 1): 0.625031
#> s (cell 1): 0.854132
#> nu (cell 1): 0.412002
#> theta (batch 1): 0.206436
#> betas:    0.7146  -0.0750   0.2025   1.2757   0.4442   0.4986   0.6747   0.5008  -0.2815   0.2557  -0.6081   0.0151
#> 
#> sigma: 0.176116
#> lambda (gene 1): 0.875574
#> epsilon (gene 1): 0.186372
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.2
#> LSdelta (gene 1): -1.4
#> LSphi: 6.8
#> LSnu (cell 1): -5.91822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 2940 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 578.087
#> delta (gene 1): 0.661573
#> phi (cell 1): 0.64726
#> s (cell 1): 0.337654
#> nu (cell 1): 0.410454
#> theta (batch 1): 0.0510555
#> betas:    1.1494  -0.0749  -0.0666   0.8724   0.3802   0.7367   0.1729   0.0929   0.1209  -0.2287  -0.9217   0.0183
#> 
#> sigma: 0.117866
#> lambda (gene 1): 0.693551
#> epsilon (gene 1): -0.468629
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.2
#> LSdelta (gene 1): -1.4
#> LSphi: 6.8
#> LSnu (cell 1): -5.91822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 2960 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 759.522
#> delta (gene 1): 0.600509
#> phi (cell 1): 0.723089
#> s (cell 1): 0.308195
#> nu (cell 1): 0.421273
#> theta (batch 1): 0.107661
#> betas:    0.6934  -0.0004   0.6936   0.7502   0.7140   0.2103   0.7454  -0.0637  -0.0994  -0.1955  -0.6599  -0.2262
#> 
#> sigma: 0.208018
#> lambda (gene 1): 0.157551
#> epsilon (gene 1): -0.336782
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.3
#> LSdelta (gene 1): -1.5
#> LSphi: 6.9
#> LSnu (cell 1): -5.81822
#> LStheta (batch 1): -0.9
#> -----------------------------------------------------
#> Iteration 2980 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 810.665
#> delta (gene 1): 0.740428
#> phi (cell 1): 0.764147
#> s (cell 1): 0.394377
#> nu (cell 1): 0.429121
#> theta (batch 1): 0.0862311
#> betas:    0.4355   0.0418   0.9629   0.5398   1.0518   0.1628   1.0051  -0.1569  -0.0502   0.0026  -0.6813  -0.5644
#> 
#> sigma: 0.177737
#> lambda (gene 1): 0.17829
#> epsilon (gene 1): -0.222653
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.3
#> LSdelta (gene 1): -1.5
#> LSphi: 6.9
#> LSnu (cell 1): -5.81822
#> LStheta (batch 1): -0.9
#> -----------------------------------------------------
#> Iteration 3000 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 739.863
#> delta (gene 1): 0.531501
#> phi (cell 1): 0.789426
#> s (cell 1): 0.376048
#> nu (cell 1): 0.422836
#> theta (batch 1): 0.0884607
#> betas:    1.2497  -0.2231   0.5726   0.4746   0.5432   0.2877   0.7541   0.8676  -0.2404  -0.1442  -0.0512   0.2200
#> 
#> sigma: 0.23767
#> lambda (gene 1): 1.7302
#> epsilon (gene 1): -0.336411
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.2
#> LSdelta (gene 1): -1.4
#> LSphi: 7
#> LSnu (cell 1): -5.91822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 3020 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 736.373
#> delta (gene 1): 0.571528
#> phi (cell 1): 0.740767
#> s (cell 1): 0.396314
#> nu (cell 1): 0.418139
#> theta (batch 1): 0.0937603
#> betas:    0.9709  -0.0566   1.0777  -0.0013   0.5696   0.5187   0.6593   0.4515  -0.3365  -0.0817  -0.4324  -0.5638
#> 
#> sigma: 0.167389
#> lambda (gene 1): 0.832275
#> epsilon (gene 1): -0.335997
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.2
#> LSdelta (gene 1): -1.4
#> LSphi: 7
#> LSnu (cell 1): -5.91822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 3040 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 836.08
#> delta (gene 1): 1.00744
#> phi (cell 1): 0.784914
#> s (cell 1): 0.298406
#> nu (cell 1): 0.421794
#> theta (batch 1): 0.0796855
#> betas:    1.2980  -0.2125  -0.4238   0.6997   0.7264   0.7707   0.5240   0.2721  -0.0238   0.0890   0.0124  -0.1400
#> 
#> sigma: 0.165364
#> lambda (gene 1): 1.30886
#> epsilon (gene 1): 0.0495466
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.2
#> LSdelta (gene 1): -1.4
#> LSphi: 7
#> LSnu (cell 1): -5.91822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 3060 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 618.7
#> delta (gene 1): 0.958093
#> phi (cell 1): 0.758078
#> s (cell 1): 1.22857
#> nu (cell 1): 0.423933
#> theta (batch 1): 0.383076
#> betas:    1.1201  -0.1115   0.2860   1.5915   0.0360   0.5529   0.5595   0.0185  -0.0719  -0.1553  -0.3772  -0.2132
#> 
#> sigma: 0.221677
#> lambda (gene 1): 2.60774
#> epsilon (gene 1): 0.148217
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.3
#> LSdelta (gene 1): -1.3
#> LSphi: 7.1
#> LSnu (cell 1): -6.01822
#> LStheta (batch 1): -0.9
#> -----------------------------------------------------
#> Iteration 3080 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 664.645
#> delta (gene 1): 0.641783
#> phi (cell 1): 0.868637
#> s (cell 1): 0.23232
#> nu (cell 1): 0.419697
#> theta (batch 1): 0.0987349
#> betas:    1.0384  -0.1734   0.8624   0.6684   0.7319   0.8971   0.1734   0.4243   0.0240   0.3015  -0.6081   0.1877
#> 
#> sigma: 0.148804
#> lambda (gene 1): 1.1906
#> epsilon (gene 1): -0.26373
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.3
#> LSdelta (gene 1): -1.3
#> LSphi: 7.1
#> LSnu (cell 1): -6.01822
#> LStheta (batch 1): -0.9
#> -----------------------------------------------------
#> Iteration 3100 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 642.678
#> delta (gene 1): 0.526146
#> phi (cell 1): 0.708982
#> s (cell 1): 0.507578
#> nu (cell 1): 0.410711
#> theta (batch 1): 0.206057
#> betas:    1.0414  -0.0681   0.8005   0.2446   0.7714   0.6073   0.5971  -0.2807   0.0517  -0.4095  -0.0401  -0.9347
#> 
#> sigma: 0.236526
#> lambda (gene 1): 1.76396
#> epsilon (gene 1): -0.450477
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.4
#> LSphi: 7
#> LSnu (cell 1): -6.11822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 3120 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 714.42
#> delta (gene 1): 0.48729
#> phi (cell 1): 0.700677
#> s (cell 1): 0.6359
#> nu (cell 1): 0.432089
#> theta (batch 1): 0.282072
#> betas:    0.4310  -0.0533   0.8342   0.4442   0.8817   0.8711   0.3804   0.2714  -0.0455   0.5718  -0.7621  -0.2560
#> 
#> sigma: 0.171569
#> lambda (gene 1): 0.744343
#> epsilon (gene 1): -0.616392
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.4
#> LSphi: 7
#> LSnu (cell 1): -6.11822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 3140 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 1021.86
#> delta (gene 1): 0.932035
#> phi (cell 1): 0.796441
#> s (cell 1): 0.353919
#> nu (cell 1): 0.429696
#> theta (batch 1): 0.219109
#> betas:    0.5679   0.1105   0.3565   0.7303   0.4884   0.5398   0.6418  -0.5164   0.1728  -0.4301  -0.7486  -1.0400
#> 
#> sigma: 0.209398
#> lambda (gene 1): 0.362872
#> epsilon (gene 1): 0.0845703
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.4
#> LSphi: 7
#> LSnu (cell 1): -6.11822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 3160 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 995.558
#> delta (gene 1): 0.845585
#> phi (cell 1): 0.871706
#> s (cell 1): 0.274637
#> nu (cell 1): 0.411408
#> theta (batch 1): 0.114028
#> betas:    1.1952  -0.2052  -0.2109   0.5061   0.3996   0.5835   0.9097   0.4559  -0.3435   0.5067  -0.4192   0.2057
#> 
#> sigma: 0.114002
#> lambda (gene 1): 1.56023
#> epsilon (gene 1): -0.097466
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.3
#> LSdelta (gene 1): -1.3
#> LSphi: 6.9
#> LSnu (cell 1): -6.21822
#> LStheta (batch 1): -1.1
#> -----------------------------------------------------
#> Iteration 3180 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 800.105
#> delta (gene 1): 0.764793
#> phi (cell 1): 0.841873
#> s (cell 1): 0.405384
#> nu (cell 1): 0.419646
#> theta (batch 1): 0.0446547
#> betas:    1.4728  -0.1832   0.2509   0.3990   0.3745   0.6374   0.0733   0.6071  -0.2162  -0.0523  -0.4800   0.1216
#> 
#> sigma: 0.176479
#> lambda (gene 1): 0.26047
#> epsilon (gene 1): -0.0814497
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.3
#> LSdelta (gene 1): -1.3
#> LSphi: 6.9
#> LSnu (cell 1): -6.21822
#> LStheta (batch 1): -1.1
#> -----------------------------------------------------
#> Iteration 3200 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 785.561
#> delta (gene 1): 0.750465
#> phi (cell 1): 0.864773
#> s (cell 1): 0.364804
#> nu (cell 1): 0.408969
#> theta (batch 1): 0.280465
#> betas:    0.6967  -0.0659   0.3306   0.7571   0.4762   0.9434   0.2206   0.2112  -0.1841   0.3090  -0.8001  -0.2914
#> 
#> sigma: 0.162268
#> lambda (gene 1): 0.703852
#> epsilon (gene 1): -0.0329256
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.2
#> LSdelta (gene 1): -1.4
#> LSphi: 6.8
#> LSnu (cell 1): -6.11822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 3220 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 699.588
#> delta (gene 1): 0.734791
#> phi (cell 1): 0.799853
#> s (cell 1): 0.282336
#> nu (cell 1): 0.424919
#> theta (batch 1): 0.236861
#> betas:    0.8338  -0.0856   0.3966   0.8727   0.9646   0.1834   0.4125   0.7183  -0.6582  -0.1887  -0.1614  -0.2035
#> 
#> sigma: 0.141475
#> lambda (gene 1): 2.31858
#> epsilon (gene 1): 0.0639715
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.2
#> LSdelta (gene 1): -1.4
#> LSphi: 6.8
#> LSnu (cell 1): -6.11822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 3240 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 725.757
#> delta (gene 1): 0.576161
#> phi (cell 1): 0.750166
#> s (cell 1): 0.383596
#> nu (cell 1): 0.40262
#> theta (batch 1): 0.0577037
#> betas:    0.8849   0.0317  -0.4821   1.1088   0.6121   0.4593   0.1968   0.3706  -0.3911  -0.2377  -0.9877  -0.2276
#> 
#> sigma: 0.152591
#> lambda (gene 1): 0.891836
#> epsilon (gene 1): -0.373311
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.2
#> LSdelta (gene 1): -1.4
#> LSphi: 6.8
#> LSnu (cell 1): -6.11822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 3260 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 726.619
#> delta (gene 1): 0.459613
#> phi (cell 1): 0.731598
#> s (cell 1): 1.6334
#> nu (cell 1): 0.432453
#> theta (batch 1): 0.255885
#> betas:    0.9734  -0.1918   0.4684   0.3957   1.0279   0.9643   0.4244   0.3873  -0.2202   0.3562  -0.2500   0.0656
#> 
#> sigma: 0.167524
#> lambda (gene 1): 0.182806
#> epsilon (gene 1): -0.611677
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.3
#> LSdelta (gene 1): -1.3
#> LSphi: 6.9
#> LSnu (cell 1): -6.01822
#> LStheta (batch 1): -0.9
#> -----------------------------------------------------
#> Iteration 3280 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 562.356
#> delta (gene 1): 0.740415
#> phi (cell 1): 0.639178
#> s (cell 1): 1.5324
#> nu (cell 1): 0.440003
#> theta (batch 1): 0.415101
#> betas:    0.6780  -0.0527   0.2563   1.1200   0.4773   0.8416   0.5365   0.2696  -0.3344   0.1443  -0.1941  -0.4782
#> 
#> sigma: 0.182062
#> lambda (gene 1): 0.782203
#> epsilon (gene 1): -0.320629
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.3
#> LSdelta (gene 1): -1.3
#> LSphi: 6.9
#> LSnu (cell 1): -6.01822
#> LStheta (batch 1): -0.9
#> -----------------------------------------------------
#> Iteration 3300 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 593.252
#> delta (gene 1): 0.653455
#> phi (cell 1): 0.734051
#> s (cell 1): 0.849671
#> nu (cell 1): 0.424306
#> theta (batch 1): 0.301216
#> betas:    0.6550  -0.0465   0.0509   0.5534   0.7089   0.9733   0.2237   0.5839  -0.1384  -0.3803  -0.3180   0.0348
#> 
#> sigma: 0.176378
#> lambda (gene 1): 1.29649
#> epsilon (gene 1): -0.244199
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.4
#> LSphi: 6.8
#> LSnu (cell 1): -6.11822
#> LStheta (batch 1): -0.8
#> -----------------------------------------------------
#> Iteration 3320 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 809.359
#> delta (gene 1): 0.68642
#> phi (cell 1): 0.743572
#> s (cell 1): 0.213852
#> nu (cell 1): 0.407851
#> theta (batch 1): 0.548812
#> betas:    0.9935  -0.1072   0.3891   0.5296   0.2680   1.2885  -0.1036   0.5232   0.0603  -0.2969  -0.6775   0.2488
#> 
#> sigma: 0.167075
#> lambda (gene 1): 0.641204
#> epsilon (gene 1): -0.138813
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.4
#> LSphi: 6.8
#> LSnu (cell 1): -6.11822
#> LStheta (batch 1): -0.8
#> -----------------------------------------------------
#> Iteration 3340 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 642.736
#> delta (gene 1): 0.72949
#> phi (cell 1): 0.889665
#> s (cell 1): 0.164145
#> nu (cell 1): 0.408519
#> theta (batch 1): 0.652739
#> betas:    0.5595  -0.0464   0.2758   0.0347   1.0885   0.9751   0.3800   0.4770  -0.1165  -0.1965  -0.2961  -0.2139
#> 
#> sigma: 0.120607
#> lambda (gene 1): 1.44987
#> epsilon (gene 1): -0.171941
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.4
#> LSphi: 6.8
#> LSnu (cell 1): -6.11822
#> LStheta (batch 1): -0.8
#> -----------------------------------------------------
#> Iteration 3360 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 678.967
#> delta (gene 1): 0.586859
#> phi (cell 1): 0.959946
#> s (cell 1): 1.31411
#> nu (cell 1): 0.427641
#> theta (batch 1): 0.222303
#> betas:    0.9114  -0.1137   0.5204   0.5079   0.4487   0.7664   0.5245   0.1781  -0.1804   0.3132  -0.6644  -0.1172
#> 
#> sigma: 0.131213
#> lambda (gene 1): 1.33586
#> epsilon (gene 1): -0.348128
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.5
#> LSdelta (gene 1): -1.3
#> LSphi: 6.7
#> LSnu (cell 1): -6.21822
#> LStheta (batch 1): -0.7
#> -----------------------------------------------------
#> Iteration 3380 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 686.717
#> delta (gene 1): 0.655626
#> phi (cell 1): 0.753571
#> s (cell 1): 0.781122
#> nu (cell 1): 0.416718
#> theta (batch 1): 0.15733
#> betas:    0.7977  -0.0038   0.9149   0.8680   0.5326   0.7785   0.0753   0.3341   0.1319  -0.5330  -0.4068  -0.7132
#> 
#> sigma: 0.159396
#> lambda (gene 1): 0.513923
#> epsilon (gene 1): -0.232162
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.5
#> LSdelta (gene 1): -1.3
#> LSphi: 6.7
#> LSnu (cell 1): -6.21822
#> LStheta (batch 1): -0.7
#> -----------------------------------------------------
#> Iteration 3400 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 843.041
#> delta (gene 1): 0.571117
#> phi (cell 1): 0.772869
#> s (cell 1): 0.288466
#> nu (cell 1): 0.421146
#> theta (batch 1): 0.100431
#> betas:    0.6356  -0.1257   1.3913  -0.2602   1.0848   0.6992   0.5382   0.5927   0.2938   0.0036  -0.4502   0.3435
#> 
#> sigma: 0.231536
#> lambda (gene 1): 1.0068
#> epsilon (gene 1): -0.273707
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.2
#> LSphi: 6.6
#> LSnu (cell 1): -6.11822
#> LStheta (batch 1): -0.8
#> -----------------------------------------------------
#> Iteration 3420 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 692.958
#> delta (gene 1): 0.884255
#> phi (cell 1): 0.725022
#> s (cell 1): 1.84062
#> nu (cell 1): 0.447395
#> theta (batch 1): 0.213482
#> betas:    1.6427  -0.2911   0.5111   0.6216  -0.0456   0.2712   0.8346   0.4201  -0.0300  -0.1678   0.1217   0.0577
#> 
#> sigma: 0.171829
#> lambda (gene 1): 0.885555
#> epsilon (gene 1): 0.183172
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.2
#> LSphi: 6.6
#> LSnu (cell 1): -6.11822
#> LStheta (batch 1): -0.8
#> -----------------------------------------------------
#> Iteration 3440 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 432.472
#> delta (gene 1): 1.06001
#> phi (cell 1): 0.638726
#> s (cell 1): 1.13943
#> nu (cell 1): 0.416143
#> theta (batch 1): 0.269635
#> betas:    0.6287  -0.0788  -0.0213   0.8020   0.6124   0.8011   0.7953   0.1961   0.1005   0.0969  -0.3482  -0.3183
#> 
#> sigma: 0.201207
#> lambda (gene 1): 0.27778
#> epsilon (gene 1): 0.304116
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.2
#> LSphi: 6.6
#> LSnu (cell 1): -6.11822
#> LStheta (batch 1): -0.8
#> -----------------------------------------------------
#> Iteration 3460 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 762.885
#> delta (gene 1): 0.725564
#> phi (cell 1): 0.66726
#> s (cell 1): 0.289312
#> nu (cell 1): 0.422147
#> theta (batch 1): 0.0510394
#> betas:    1.0587  -0.1393   0.8390   0.7588   0.4792   0.3125   0.6429  -0.1811   0.1670   0.0370  -0.6683   0.1182
#> 
#> sigma: 0.15618
#> lambda (gene 1): 1.73125
#> epsilon (gene 1): -0.189922
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.3
#> LSdelta (gene 1): -1.3
#> LSphi: 6.7
#> LSnu (cell 1): -6.01822
#> LStheta (batch 1): -0.7
#> -----------------------------------------------------
#> Iteration 3480 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 750.09
#> delta (gene 1): 0.684279
#> phi (cell 1): 0.74218
#> s (cell 1): 0.414138
#> nu (cell 1): 0.423492
#> theta (batch 1): 0.0931346
#> betas:    1.1079  -0.1814  -0.2928   1.0907   0.3523   0.8252   0.1167   0.4613  -0.0466   0.0700  -0.2514  -0.1790
#> 
#> sigma: 0.173738
#> lambda (gene 1): 1.81047
#> epsilon (gene 1): -0.265202
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.3
#> LSdelta (gene 1): -1.3
#> LSphi: 6.7
#> LSnu (cell 1): -6.01822
#> LStheta (batch 1): -0.7
#> -----------------------------------------------------
#> Iteration 3500 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 545.071
#> delta (gene 1): 0.73437
#> phi (cell 1): 0.743547
#> s (cell 1): 0.393172
#> nu (cell 1): 0.42879
#> theta (batch 1): 0.0492356
#> betas:    0.9618  -0.2455   0.1632   0.8785   0.9958   0.0709   0.8706   0.8135   0.3202  -0.6930   0.8541   0.1060
#> 
#> sigma: 0.174045
#> lambda (gene 1): 2.44892
#> epsilon (gene 1): -0.0881338
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.2
#> LSdelta (gene 1): -1.4
#> LSphi: 6.8
#> LSnu (cell 1): -5.91822
#> LStheta (batch 1): -0.6
#> -----------------------------------------------------
#> Iteration 3520 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 715.227
#> delta (gene 1): 0.639768
#> phi (cell 1): 0.747678
#> s (cell 1): 0.421992
#> nu (cell 1): 0.418409
#> theta (batch 1): 0.0896091
#> betas:    0.7588  -0.1063   0.8326   0.4837   0.8250   0.9566   0.1811   0.2065   0.5827  -0.3108  -0.2209   0.0653
#> 
#> sigma: 0.141096
#> lambda (gene 1): 1.63084
#> epsilon (gene 1): -0.27734
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.2
#> LSdelta (gene 1): -1.4
#> LSphi: 6.8
#> LSnu (cell 1): -5.91822
#> LStheta (batch 1): -0.6
#> -----------------------------------------------------
#> Iteration 3540 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 614.575
#> delta (gene 1): 0.59714
#> phi (cell 1): 0.601902
#> s (cell 1): 0.363988
#> nu (cell 1): 0.413567
#> theta (batch 1): 0.224017
#> betas:    1.1615  -0.0897   0.3053   0.6530   1.0035   0.7498  -0.2583   0.4962   0.0022  -0.3362   0.0776  -1.2086
#> 
#> sigma: 0.165648
#> lambda (gene 1): 0.541289
#> epsilon (gene 1): -0.234029
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.2
#> LSdelta (gene 1): -1.4
#> LSphi: 6.8
#> LSnu (cell 1): -5.91822
#> LStheta (batch 1): -0.6
#> -----------------------------------------------------
#> Iteration 3560 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 567.928
#> delta (gene 1): 0.505536
#> phi (cell 1): 0.651267
#> s (cell 1): 0.558427
#> nu (cell 1): 0.424365
#> theta (batch 1): 0.343042
#> betas:    1.4332  -0.2503   0.5540   0.9790   0.7806  -0.0004   0.8300  -0.0312   0.7105  -0.7183  -0.0476   0.2563
#> 
#> sigma: 0.171742
#> lambda (gene 1): 1.54713
#> epsilon (gene 1): -0.338784
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.3
#> LSdelta (gene 1): -1.5
#> LSphi: 6.9
#> LSnu (cell 1): -6.01822
#> LStheta (batch 1): -0.7
#> -----------------------------------------------------
#> Iteration 3580 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 674.529
#> delta (gene 1): 0.695806
#> phi (cell 1): 0.642553
#> s (cell 1): 1.4725
#> nu (cell 1): 0.424136
#> theta (batch 1): 0.287515
#> betas:    0.7758  -0.0200   0.7467   0.9040   0.7353   0.3433   0.5087  -0.0579   0.2174  -0.2109  -0.8325  -0.1630
#> 
#> sigma: 0.169551
#> lambda (gene 1): 0.316228
#> epsilon (gene 1): -0.324346
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.3
#> LSdelta (gene 1): -1.5
#> LSphi: 6.9
#> LSnu (cell 1): -6.01822
#> LStheta (batch 1): -0.7
#> -----------------------------------------------------
#> Iteration 3600 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 932.876
#> delta (gene 1): 0.887832
#> phi (cell 1): 0.710984
#> s (cell 1): 0.566997
#> nu (cell 1): 0.43405
#> theta (batch 1): 0.206927
#> betas:    1.5418  -0.2223   0.4545   0.2648   0.9238   0.4255   0.2952   0.1465   0.4671  -0.2314  -0.2355  -0.1037
#> 
#> sigma: 0.21182
#> lambda (gene 1): 0.930516
#> epsilon (gene 1): 0.199451
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.2
#> LSdelta (gene 1): -1.4
#> LSphi: 7
#> LSnu (cell 1): -5.91822
#> LStheta (batch 1): -0.8
#> -----------------------------------------------------
#> Iteration 3620 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 778.078
#> delta (gene 1): 0.658054
#> phi (cell 1): 0.757371
#> s (cell 1): 0.434485
#> nu (cell 1): 0.431443
#> theta (batch 1): 0.115004
#> betas:    0.4403  -0.0371   0.0745  -0.0353   0.9377   0.9563   0.6784   0.3916  -0.0009   0.3696  -0.6415  -0.3118
#> 
#> sigma: 0.16937
#> lambda (gene 1): 1.56066
#> epsilon (gene 1): -0.0505105
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.2
#> LSdelta (gene 1): -1.4
#> LSphi: 7
#> LSnu (cell 1): -5.91822
#> LStheta (batch 1): -0.8
#> -----------------------------------------------------
#> Iteration 3640 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 587.035
#> delta (gene 1): 0.555728
#> phi (cell 1): 0.776324
#> s (cell 1): 0.32231
#> nu (cell 1): 0.42418
#> theta (batch 1): 0.128539
#> betas:    1.5004  -0.2883  -0.1708   1.1621   0.2954   1.3606  -0.0575   0.5207   0.3115   0.1948  -0.4302   0.4778
#> 
#> sigma: 0.168612
#> lambda (gene 1): 1.72167
#> epsilon (gene 1): -0.264167
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.2
#> LSdelta (gene 1): -1.4
#> LSphi: 7
#> LSnu (cell 1): -5.91822
#> LStheta (batch 1): -0.8
#> -----------------------------------------------------
#> Iteration 3660 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 672.958
#> delta (gene 1): 0.710404
#> phi (cell 1): 0.748135
#> s (cell 1): 0.568249
#> nu (cell 1): 0.429466
#> theta (batch 1): 0.176057
#> betas:    0.6442  -0.0636   0.1688   0.7056   0.3379   0.8016   0.3268   0.3466   0.0708  -0.1630  -0.0040  -0.5997
#> 
#> sigma: 0.149022
#> lambda (gene 1): 0.685106
#> epsilon (gene 1): -0.34888
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.3
#> LSdelta (gene 1): -1.5
#> LSphi: 6.9
#> LSnu (cell 1): -6.01822
#> LStheta (batch 1): -0.9
#> -----------------------------------------------------
#> Iteration 3680 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 769.863
#> delta (gene 1): 0.775041
#> phi (cell 1): 0.757617
#> s (cell 1): 0.697517
#> nu (cell 1): 0.423185
#> theta (batch 1): 0.05635
#> betas:    0.9390  -0.0507  -0.4434   1.0813   1.0605   0.1217   0.4094   0.5171  -0.5849  -0.1345  -0.0831  -0.8599
#> 
#> sigma: 0.228057
#> lambda (gene 1): 0.614836
#> epsilon (gene 1): -0.150167
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.3
#> LSdelta (gene 1): -1.5
#> LSphi: 6.9
#> LSnu (cell 1): -6.01822
#> LStheta (batch 1): -0.9
#> -----------------------------------------------------
#> Iteration 3700 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 483.974
#> delta (gene 1): 0.956729
#> phi (cell 1): 0.679997
#> s (cell 1): 0.474161
#> nu (cell 1): 0.419476
#> theta (batch 1): 0.118678
#> betas:    0.7386  -0.1638   0.5793  -0.1724   1.0971   0.9252   0.6347   0.1671   0.1128   0.2057  -0.1233   0.0975
#> 
#> sigma: 0.210681
#> lambda (gene 1): 0.353458
#> epsilon (gene 1): 0.000894185
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 6.8
#> LSnu (cell 1): -6.11822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 3720 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 752.457
#> delta (gene 1): 0.719839
#> phi (cell 1): 0.803728
#> s (cell 1): 0.406185
#> nu (cell 1): 0.40993
#> theta (batch 1): 0.116192
#> betas:    0.9836  -0.0480   0.8044  -0.0251   1.1700   0.3023   0.4344  -0.3416   0.2485  -0.4683  -0.5728  -0.1541
#> 
#> sigma: 0.172934
#> lambda (gene 1): 1.3801
#> epsilon (gene 1): -0.161047
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 6.8
#> LSnu (cell 1): -6.11822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 3740 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 676.021
#> delta (gene 1): 0.655025
#> phi (cell 1): 0.735517
#> s (cell 1): 0.552083
#> nu (cell 1): 0.415364
#> theta (batch 1): 0.202655
#> betas:    0.3362   0.0120   0.5488   1.1026   0.6518   0.5111   0.6023   0.0606   0.1046  -0.2859  -0.4951  -0.2354
#> 
#> sigma: 0.167631
#> lambda (gene 1): 2.58947
#> epsilon (gene 1): -0.20977
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 6.8
#> LSnu (cell 1): -6.11822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 3760 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 746.504
#> delta (gene 1): 1.10915
#> phi (cell 1): 0.61936
#> s (cell 1): 0.380326
#> nu (cell 1): 0.426977
#> theta (batch 1): 0.174002
#> betas:    1.0921  -0.1159  -0.0275   1.0491   0.7821   0.2025   0.1015   0.4290  -0.1019  -0.2196  -0.2596  -0.3327
#> 
#> sigma: 0.170242
#> lambda (gene 1): 0.440287
#> epsilon (gene 1): 0.146448
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.3
#> LSdelta (gene 1): -1.5
#> LSphi: 6.9
#> LSnu (cell 1): -6.01822
#> LStheta (batch 1): -1.1
#> -----------------------------------------------------
#> Iteration 3780 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 546.35
#> delta (gene 1): 0.785154
#> phi (cell 1): 0.605609
#> s (cell 1): 0.177884
#> nu (cell 1): 0.439653
#> theta (batch 1): 0.376474
#> betas:    1.0240  -0.0992   0.4929   0.8455   0.5900   0.5045   0.0165   0.0672   0.3675  -0.6125   0.1247  -0.5887
#> 
#> sigma: 0.137441
#> lambda (gene 1): 1.32649
#> epsilon (gene 1): -0.290667
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.3
#> LSdelta (gene 1): -1.5
#> LSphi: 6.9
#> LSnu (cell 1): -6.01822
#> LStheta (batch 1): -1.1
#> -----------------------------------------------------
#> Iteration 3800 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 712.622
#> delta (gene 1): 0.789572
#> phi (cell 1): 0.64017
#> s (cell 1): 0.374489
#> nu (cell 1): 0.417783
#> theta (batch 1): 0.320065
#> betas:    0.9944  -0.1031   0.7278   0.1915   0.7804   0.7105   0.3649  -0.0700   0.5517  -0.4067  -0.1080  -0.9075
#> 
#> sigma: 0.183549
#> lambda (gene 1): 1.54531
#> epsilon (gene 1): -0.00267522
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.4
#> LSphi: 7
#> LSnu (cell 1): -5.91822
#> LStheta (batch 1): -1.2
#> -----------------------------------------------------
#> Iteration 3820 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 696.329
#> delta (gene 1): 1.05304
#> phi (cell 1): 0.646971
#> s (cell 1): 2.74042
#> nu (cell 1): 0.411766
#> theta (batch 1): 0.37311
#> betas:    0.7902  -0.1060   0.6195   0.9324   0.5908   0.7089   0.5570   0.0025   0.0190  -0.2163  -0.0434  -0.2248
#> 
#> sigma: 0.163095
#> lambda (gene 1): 1.13496
#> epsilon (gene 1): 0.271909
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.4
#> LSphi: 7
#> LSnu (cell 1): -5.91822
#> LStheta (batch 1): -1.2
#> -----------------------------------------------------
#> Iteration 3840 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 502.114
#> delta (gene 1): 0.84491
#> phi (cell 1): 0.631803
#> s (cell 1): 0.845461
#> nu (cell 1): 0.414417
#> theta (batch 1): 0.417122
#> betas:    1.2714  -0.1448   0.0491   1.2900   0.1801   0.4193   0.3136   0.5260  -0.2635  -0.4106  -0.0086  -0.2636
#> 
#> sigma: 0.130283
#> lambda (gene 1): 0.943261
#> epsilon (gene 1): 0.0762994
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.4
#> LSphi: 7
#> LSnu (cell 1): -5.91822
#> LStheta (batch 1): -1.2
#> -----------------------------------------------------
#> Iteration 3860 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 668.559
#> delta (gene 1): 0.746354
#> phi (cell 1): 0.67938
#> s (cell 1): 0.47927
#> nu (cell 1): 0.419428
#> theta (batch 1): 0.516508
#> betas:    0.7917  -0.0614   0.2278  -0.1118   1.4120   0.6087   0.3888   0.2787   0.0473  -0.3292  -0.4135  -0.2767
#> 
#> sigma: 0.142173
#> lambda (gene 1): 0.798641
#> epsilon (gene 1): 0.101268
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.3
#> LSdelta (gene 1): -1.5
#> LSphi: 6.9
#> LSnu (cell 1): -5.81822
#> LStheta (batch 1): -1.1
#> -----------------------------------------------------
#> Iteration 3880 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 682.592
#> delta (gene 1): 0.587927
#> phi (cell 1): 0.738066
#> s (cell 1): 1.50929
#> nu (cell 1): 0.434147
#> theta (batch 1): 0.778464
#> betas:    0.8110  -0.0887   0.6973  -0.3237   0.8593   0.8770   0.6170   0.1767   0.2895  -0.3600  -0.1772  -0.1154
#> 
#> sigma: 0.118954
#> lambda (gene 1): 0.441087
#> epsilon (gene 1): -0.340955
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.3
#> LSdelta (gene 1): -1.5
#> LSphi: 6.9
#> LSnu (cell 1): -5.81822
#> LStheta (batch 1): -1.1
#> -----------------------------------------------------
#> Iteration 3900 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 1006.59
#> delta (gene 1): 0.675781
#> phi (cell 1): 0.733081
#> s (cell 1): 0.71602
#> nu (cell 1): 0.425361
#> theta (batch 1): 0.224515
#> betas:    1.1541  -0.2588  -0.2169   1.0822   0.1838   1.1628   0.3905   0.1643   0.5504   0.0635  -0.0569   0.2081
#> 
#> sigma: 0.22217
#> lambda (gene 1): 1.33249
#> epsilon (gene 1): -0.111268
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.2
#> LSdelta (gene 1): -1.4
#> LSphi: 6.8
#> LSnu (cell 1): -5.91822
#> LStheta (batch 1): -1.2
#> -----------------------------------------------------
#> Iteration 3920 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 992.143
#> delta (gene 1): 0.86563
#> phi (cell 1): 0.911064
#> s (cell 1): 0.420771
#> nu (cell 1): 0.415438
#> theta (batch 1): 0.0658736
#> betas:    0.4519   0.0604   0.6022   0.6894   1.0077   0.1295   0.4851   0.5039  -0.4343  -0.7431   0.1348  -1.1062
#> 
#> sigma: 0.16277
#> lambda (gene 1): 1.51571
#> epsilon (gene 1): 0.199129
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.2
#> LSdelta (gene 1): -1.4
#> LSphi: 6.8
#> LSnu (cell 1): -5.91822
#> LStheta (batch 1): -1.2
#> -----------------------------------------------------
#> Iteration 3940 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 658.167
#> delta (gene 1): 0.591427
#> phi (cell 1): 0.872999
#> s (cell 1): 0.3937
#> nu (cell 1): 0.428531
#> theta (batch 1): 0.0899172
#> betas:    1.2099  -0.1861   0.4689   0.2570   0.6241   0.7602   0.2915   0.1393   0.2239  -0.2505  -0.1509  -0.1606
#> 
#> sigma: 0.140481
#> lambda (gene 1): 0.80835
#> epsilon (gene 1): -0.112298
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.2
#> LSdelta (gene 1): -1.4
#> LSphi: 6.8
#> LSnu (cell 1): -5.91822
#> LStheta (batch 1): -1.2
#> -----------------------------------------------------
#> Iteration 3960 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 628.593
#> delta (gene 1): 0.659433
#> phi (cell 1): 0.783649
#> s (cell 1): 0.498098
#> nu (cell 1): 0.409282
#> theta (batch 1): 0.120497
#> betas:    0.1076  -0.0047   0.7979   1.2800   0.8457   0.9290   0.5539   0.4052   0.2049  -0.1983  -0.1155  -0.4455
#> 
#> sigma: 0.15763
#> lambda (gene 1): 0.918532
#> epsilon (gene 1): -0.318273
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.3
#> LSdelta (gene 1): -1.5
#> LSphi: 6.7
#> LSnu (cell 1): -6.01822
#> LStheta (batch 1): -1.3
#> -----------------------------------------------------
#> Iteration 3980 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 633.37
#> delta (gene 1): 0.903508
#> phi (cell 1): 0.83491
#> s (cell 1): 0.351845
#> nu (cell 1): 0.428847
#> theta (batch 1): 0.124189
#> betas:    0.8769   0.0283  -0.1320   0.3243   0.5810   0.7288   0.3620  -0.0591  -0.0953  -0.0972  -0.7406  -1.2707
#> 
#> sigma: 0.14412
#> lambda (gene 1): 0.485534
#> epsilon (gene 1): -0.0643368
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.3
#> LSdelta (gene 1): -1.5
#> LSphi: 6.7
#> LSnu (cell 1): -6.01822
#> LStheta (batch 1): -1.3
#> -----------------------------------------------------
#> Iteration 4000 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 725.343
#> delta (gene 1): 0.718594
#> phi (cell 1): 0.866288
#> s (cell 1): 0.457554
#> nu (cell 1): 0.41995
#> theta (batch 1): 0.0504906
#> betas:    0.5492  -0.0862   0.3453   0.7951   0.3343   0.9619   0.9091   0.0909   0.1489   0.1913  -0.6534  -0.0526
#> 
#> sigma: 0.17428
#> lambda (gene 1): 1.24586
#> epsilon (gene 1): -0.00780468
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.2
#> LSdelta (gene 1): -1.6
#> LSphi: 6.8
#> LSnu (cell 1): -6.11822
#> LStheta (batch 1): -1.4
#> -----------------------------------------------------
#> Iteration 4020 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 708.47
#> delta (gene 1): 0.85376
#> phi (cell 1): 0.890365
#> s (cell 1): 0.42388
#> nu (cell 1): 0.425852
#> theta (batch 1): 0.0620792
#> betas:    1.1151  -0.1582   0.3940   0.8461  -0.2505   0.8526   0.7578  -0.1555   0.1304   0.2977  -0.2233  -0.5211
#> 
#> sigma: 0.182192
#> lambda (gene 1): 0.699788
#> epsilon (gene 1): -0.16939
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.2
#> LSdelta (gene 1): -1.6
#> LSphi: 6.8
#> LSnu (cell 1): -6.11822
#> LStheta (batch 1): -1.4
#> -----------------------------------------------------
#> Iteration 4040 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 649.423
#> delta (gene 1): 1.00152
#> phi (cell 1): 0.694781
#> s (cell 1): 0.762385
#> nu (cell 1): 0.418426
#> theta (batch 1): 0.0599253
#> betas:    0.6904  -0.0258   0.6656  -0.0749   0.6624   1.1054   0.7676  -0.0809   0.0336  -0.2848   0.0572  -1.0540
#> 
#> sigma: 0.192872
#> lambda (gene 1): 0.619508
#> epsilon (gene 1): 0.104431
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.2
#> LSdelta (gene 1): -1.6
#> LSphi: 6.8
#> LSnu (cell 1): -6.11822
#> LStheta (batch 1): -1.4
#> -----------------------------------------------------
#> Iteration 4060 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 818.476
#> delta (gene 1): 0.808487
#> phi (cell 1): 0.610426
#> s (cell 1): 0.409183
#> nu (cell 1): 0.423121
#> theta (batch 1): 0.00598497
#> betas:    0.2256  -0.0296   0.4904   0.6360   1.1627   0.5949   0.6801   0.1839   0.1041  -0.1206  -0.0687  -0.4838
#> 
#> sigma: 0.152765
#> lambda (gene 1): 1.05919
#> epsilon (gene 1): -0.0514676
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.3
#> LSdelta (gene 1): -1.5
#> LSphi: 6.9
#> LSnu (cell 1): -6.01822
#> LStheta (batch 1): -1.3
#> -----------------------------------------------------
#> Iteration 4080 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 718.356
#> delta (gene 1): 0.658633
#> phi (cell 1): 0.628565
#> s (cell 1): 0.435509
#> nu (cell 1): 0.437416
#> theta (batch 1): 0.00952505
#> betas:    1.3339  -0.1810   0.6047  -0.0661   0.9167   0.6033  -0.1956   0.8416  -0.2820   0.0128  -0.3210  -0.1444
#> 
#> sigma: 0.157722
#> lambda (gene 1): 0.920211
#> epsilon (gene 1): -0.277783
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.3
#> LSdelta (gene 1): -1.5
#> LSphi: 6.9
#> LSnu (cell 1): -6.01822
#> LStheta (batch 1): -1.3
#> -----------------------------------------------------
#> Iteration 4100 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 797.701
#> delta (gene 1): 0.686465
#> phi (cell 1): 0.647772
#> s (cell 1): 0.401323
#> nu (cell 1): 0.41944
#> theta (batch 1): 0.0105714
#> betas:    0.5427  -0.0653   0.5938   0.5101   1.4426   0.2552   0.6440   0.3476  -0.0662   0.0391  -0.2754  -0.5128
#> 
#> sigma: 0.166923
#> lambda (gene 1): 0.518116
#> epsilon (gene 1): -0.102684
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7
#> LSnu (cell 1): -6.11822
#> LStheta (batch 1): -1.2
#> -----------------------------------------------------
#> Iteration 4120 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 725.435
#> delta (gene 1): 0.552704
#> phi (cell 1): 0.702438
#> s (cell 1): 0.383938
#> nu (cell 1): 0.429017
#> theta (batch 1): 0.0104424
#> betas:    0.7137  -0.1438   0.7588   0.6310   1.0338   0.4857   0.4113   0.1082   0.5292  -0.4206   0.1166  -0.0694
#> 
#> sigma: 0.127083
#> lambda (gene 1): 0.489159
#> epsilon (gene 1): -0.313968
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7
#> LSnu (cell 1): -6.11822
#> LStheta (batch 1): -1.2
#> -----------------------------------------------------
#> Iteration 4140 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 795.054
#> delta (gene 1): 0.861534
#> phi (cell 1): 0.662719
#> s (cell 1): 0.441901
#> nu (cell 1): 0.431791
#> theta (batch 1): 0.0103163
#> betas:    0.9111  -0.0145   0.1661   0.6718   0.9372   0.3806   0.0605  -0.2429   0.3004  -0.3413  -0.8068  -0.4686
#> 
#> sigma: 0.162302
#> lambda (gene 1): 1.75461
#> epsilon (gene 1): 0.126586
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7
#> LSnu (cell 1): -6.11822
#> LStheta (batch 1): -1.2
#> -----------------------------------------------------
#> Iteration 4160 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 606.744
#> delta (gene 1): 0.786307
#> phi (cell 1): 0.707368
#> s (cell 1): 0.423858
#> nu (cell 1): 0.413265
#> theta (batch 1): 0.00873159
#> betas:    0.5728  -0.0032  -0.0716   0.5779   1.0168   0.3335   0.4926   0.5052  -0.1314  -0.2256  -0.4609  -0.1687
#> 
#> sigma: 0.177704
#> lambda (gene 1): 0.694398
#> epsilon (gene 1): -0.11314
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.3
#> LSdelta (gene 1): -1.7
#> LSphi: 6.9
#> LSnu (cell 1): -6.01822
#> LStheta (batch 1): -1.3
#> -----------------------------------------------------
#> Iteration 4180 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 621.071
#> delta (gene 1): 0.600092
#> phi (cell 1): 0.614403
#> s (cell 1): 0.395842
#> nu (cell 1): 0.433565
#> theta (batch 1): 0.00482343
#> betas:    1.3184  -0.1547   0.0371  -0.0134   0.4778   1.0787   0.3540   0.0478   0.0100   0.1379  -0.6483  -0.2751
#> 
#> sigma: 0.154774
#> lambda (gene 1): 0.230548
#> epsilon (gene 1): -0.274729
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.3
#> LSdelta (gene 1): -1.7
#> LSphi: 6.9
#> LSnu (cell 1): -6.01822
#> LStheta (batch 1): -1.3
#> -----------------------------------------------------
#> Iteration 4200 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 766.444
#> delta (gene 1): 0.814043
#> phi (cell 1): 0.644869
#> s (cell 1): 0.484705
#> nu (cell 1): 0.423446
#> theta (batch 1): 0.0362836
#> betas:    1.0785  -0.1144   0.4901   0.5833   0.4765   0.7652   0.2510   0.3908  -0.3723  -0.0251  -0.4006  -0.3170
#> 
#> sigma: 0.165615
#> lambda (gene 1): 2.40004
#> epsilon (gene 1): 0.101285
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.2
#> LSdelta (gene 1): -1.8
#> LSphi: 6.8
#> LSnu (cell 1): -6.11822
#> LStheta (batch 1): -1.4
#> -----------------------------------------------------
#> Iteration 4220 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 734.444
#> delta (gene 1): 0.518726
#> phi (cell 1): 0.674777
#> s (cell 1): 0.351191
#> nu (cell 1): 0.421487
#> theta (batch 1): 0.102918
#> betas:    0.5960  -0.0304   0.2645   1.0841   0.8302   0.3672   0.8862  -0.0066  -0.0312   0.0377  -0.5944  -0.0973
#> 
#> sigma: 0.164241
#> lambda (gene 1): 0.958922
#> epsilon (gene 1): -0.538597
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.2
#> LSdelta (gene 1): -1.8
#> LSphi: 6.8
#> LSnu (cell 1): -6.11822
#> LStheta (batch 1): -1.4
#> -----------------------------------------------------
#> Iteration 4240 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 881.222
#> delta (gene 1): 0.736198
#> phi (cell 1): 0.841469
#> s (cell 1): 0.580877
#> nu (cell 1): 0.422617
#> theta (batch 1): 0.307245
#> betas:    0.5928  -0.2524   0.5360   0.4038   0.8109   0.6923   0.6705   1.0144   0.1768   0.1102   0.1082   0.5873
#> 
#> sigma: 0.203737
#> lambda (gene 1): 2.579
#> epsilon (gene 1): 0.0919383
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.2
#> LSdelta (gene 1): -1.8
#> LSphi: 6.8
#> LSnu (cell 1): -6.11822
#> LStheta (batch 1): -1.4
#> -----------------------------------------------------
#> Iteration 4260 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 720.137
#> delta (gene 1): 0.691873
#> phi (cell 1): 0.73216
#> s (cell 1): 0.862848
#> nu (cell 1): 0.440281
#> theta (batch 1): 0.101237
#> betas:    1.2020  -0.1560  -0.2494   1.1273   0.5234   0.7387   0.2849   0.1544   0.1576  -0.0705  -0.5238   0.1923
#> 
#> sigma: 0.147985
#> lambda (gene 1): 0.383634
#> epsilon (gene 1): -0.287997
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.3
#> LSdelta (gene 1): -1.7
#> LSphi: 6.9
#> LSnu (cell 1): -6.01822
#> LStheta (batch 1): -1.5
#> -----------------------------------------------------
#> Iteration 4280 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 788.645
#> delta (gene 1): 0.802758
#> phi (cell 1): 0.927962
#> s (cell 1): 0.441492
#> nu (cell 1): 0.405519
#> theta (batch 1): 0.101809
#> betas:    0.2620  -0.0006   0.8875   0.4092   1.4899   0.6828   0.1639   0.4443  -0.1170   0.2772  -1.0930   0.3865
#> 
#> sigma: 0.136865
#> lambda (gene 1): 0.27183
#> epsilon (gene 1): -0.0600197
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.3
#> LSdelta (gene 1): -1.7
#> LSphi: 6.9
#> LSnu (cell 1): -6.01822
#> LStheta (batch 1): -1.5
#> -----------------------------------------------------
#> Iteration 4300 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 843.338
#> delta (gene 1): 0.907026
#> phi (cell 1): 1.08274
#> s (cell 1): 0.967164
#> nu (cell 1): 0.432876
#> theta (batch 1): 0.10806
#> betas:    0.6138   0.1071   0.4445   0.6257   0.6312   0.5812   0.3722  -0.1395  -0.4401   0.0078  -0.8604  -1.1206
#> 
#> sigma: 0.17613
#> lambda (gene 1): 0.981663
#> epsilon (gene 1): 0.0775536
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.2
#> LSdelta (gene 1): -1.8
#> LSphi: 7
#> LSnu (cell 1): -5.91822
#> LStheta (batch 1): -1.6
#> -----------------------------------------------------
#> Iteration 4320 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 835.051
#> delta (gene 1): 0.591295
#> phi (cell 1): 0.999356
#> s (cell 1): 1.21051
#> nu (cell 1): 0.418027
#> theta (batch 1): 0.445399
#> betas:    0.6418  -0.0440   0.1944   0.7507   0.6482   1.0959   0.1374   0.2822   0.0553   0.1563  -0.7277  -0.1395
#> 
#> sigma: 0.167466
#> lambda (gene 1): 0.839534
#> epsilon (gene 1): -0.364121
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.2
#> LSdelta (gene 1): -1.8
#> LSphi: 7
#> LSnu (cell 1): -5.91822
#> LStheta (batch 1): -1.6
#> -----------------------------------------------------
#> Iteration 4340 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 648.071
#> delta (gene 1): 0.812483
#> phi (cell 1): 0.944854
#> s (cell 1): 0.428239
#> nu (cell 1): 0.419793
#> theta (batch 1): 0.319393
#> betas:    0.9408  -0.0311   0.3447   1.2043   0.9437   0.6448  -0.0166   0.3663   0.0023  -0.4241  -0.4348  -0.5979
#> 
#> sigma: 0.151721
#> lambda (gene 1): 2.12711
#> epsilon (gene 1): 0.0626462
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.2
#> LSdelta (gene 1): -1.8
#> LSphi: 7
#> LSnu (cell 1): -5.91822
#> LStheta (batch 1): -1.6
#> -----------------------------------------------------
#> Iteration 4360 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 713.91
#> delta (gene 1): 0.845871
#> phi (cell 1): 1.00055
#> s (cell 1): 1.90092
#> nu (cell 1): 0.410774
#> theta (batch 1): 0.381544
#> betas:    0.8991  -0.1238   0.6638   0.2120   0.8262   0.8648   0.2932   0.1646   0.0805  -0.0364  -0.2319  -0.0574
#> 
#> sigma: 0.176699
#> lambda (gene 1): 1.31248
#> epsilon (gene 1): -0.027137
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.3
#> LSdelta (gene 1): -1.9
#> LSphi: 6.9
#> LSnu (cell 1): -5.81822
#> LStheta (batch 1): -1.5
#> -----------------------------------------------------
#> Iteration 4380 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 885.454
#> delta (gene 1): 0.635609
#> phi (cell 1): 1.12462
#> s (cell 1): 0.458379
#> nu (cell 1): 0.425052
#> theta (batch 1): 0.120652
#> betas:    0.8008  -0.1626   1.0055   0.6499   0.8021   0.9148   0.1812  -0.0536   1.0236  -0.4600  -0.1654   0.1720
#> 
#> sigma: 0.204328
#> lambda (gene 1): 2.60342
#> epsilon (gene 1): -0.144235
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.3
#> LSdelta (gene 1): -1.9
#> LSphi: 6.9
#> LSnu (cell 1): -5.81822
#> LStheta (batch 1): -1.5
#> -----------------------------------------------------
#> Iteration 4400 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 667.847
#> delta (gene 1): 1.1007
#> phi (cell 1): 0.991405
#> s (cell 1): 0.290474
#> nu (cell 1): 0.426992
#> theta (batch 1): 0.200875
#> betas:    0.9289  -0.0888   0.3026   0.6288   0.8596   0.8225  -0.0617   0.3162   0.3202  -0.5564   0.1056  -0.7439
#> 
#> sigma: 0.183159
#> lambda (gene 1): 2.43853
#> epsilon (gene 1): 0.203564
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.8
#> LSphi: 6.8
#> LSnu (cell 1): -5.91822
#> LStheta (batch 1): -1.4
#> -----------------------------------------------------
#> Iteration 4420 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 986.096
#> delta (gene 1): 0.747513
#> phi (cell 1): 0.965092
#> s (cell 1): 0.563242
#> nu (cell 1): 0.417452
#> theta (batch 1): 0.227347
#> betas:    0.5743  -0.1165   0.5748   0.8705   1.1568   0.8849   0.1542   0.6443  -0.0494   0.0377   0.2070  -0.3396
#> 
#> sigma: 0.162335
#> lambda (gene 1): 1.68805
#> epsilon (gene 1): -0.296337
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.8
#> LSphi: 6.8
#> LSnu (cell 1): -5.91822
#> LStheta (batch 1): -1.4
#> -----------------------------------------------------
#> Iteration 4440 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 867.685
#> delta (gene 1): 0.892705
#> phi (cell 1): 0.819762
#> s (cell 1): 1.35869
#> nu (cell 1): 0.424112
#> theta (batch 1): 0.138961
#> betas:    0.9934  -0.1559   0.4531   0.3283   0.6956   0.7790   0.5735  -0.0230   0.3633  -0.0194  -0.2595  -0.1121
#> 
#> sigma: 0.147165
#> lambda (gene 1): 0.724212
#> epsilon (gene 1): -0.061013
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.8
#> LSphi: 6.8
#> LSnu (cell 1): -5.91822
#> LStheta (batch 1): -1.4
#> -----------------------------------------------------
#> Iteration 4460 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 713.328
#> delta (gene 1): 0.825272
#> phi (cell 1): 0.749232
#> s (cell 1): 0.459173
#> nu (cell 1): 0.407278
#> theta (batch 1): 0.238782
#> betas:    0.8521  -0.1144   0.8901   0.3890   0.6077   0.8461   0.3152   0.1855   0.0326  -0.1244  -0.3766  -0.0369
#> 
#> sigma: 0.159288
#> lambda (gene 1): 0.550342
#> epsilon (gene 1): -0.09343
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.3
#> LSdelta (gene 1): -1.9
#> LSphi: 6.7
#> LSnu (cell 1): -6.01822
#> LStheta (batch 1): -1.3
#> -----------------------------------------------------
#> Iteration 4480 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 666.698
#> delta (gene 1): 0.433832
#> phi (cell 1): 0.74255
#> s (cell 1): 0.217154
#> nu (cell 1): 0.427908
#> theta (batch 1): 0.191091
#> betas:    0.2972   0.0494   0.7629   0.1030   0.9669   1.1475  -0.5880   0.2350   0.5117  -0.8963  -0.6471  -0.0693
#> 
#> sigma: 0.146314
#> lambda (gene 1): 1.34369
#> epsilon (gene 1): -0.659977
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.3
#> LSdelta (gene 1): -1.9
#> LSphi: 6.7
#> LSnu (cell 1): -6.01822
#> LStheta (batch 1): -1.3
#> -----------------------------------------------------
#> Iteration 4500 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 777.887
#> delta (gene 1): 0.513754
#> phi (cell 1): 0.784089
#> s (cell 1): 0.29146
#> nu (cell 1): 0.422768
#> theta (batch 1): 0.471864
#> betas:    0.7950  -0.0514   0.4216   0.9798   0.4747   0.6165   0.4348   0.4109  -0.4716  -0.3634   0.1484  -0.8591
#> 
#> sigma: 0.152746
#> lambda (gene 1): 0.247721
#> epsilon (gene 1): -0.411828
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -2
#> LSphi: 6.8
#> LSnu (cell 1): -6.11822
#> LStheta (batch 1): -1.2
#> -----------------------------------------------------
#> Iteration 4520 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 755.728
#> delta (gene 1): 0.735696
#> phi (cell 1): 0.711444
#> s (cell 1): 0.360947
#> nu (cell 1): 0.434953
#> theta (batch 1): 0.286442
#> betas:    0.8178  -0.0772   0.5825   0.4449   0.7097   0.8543  -0.0657   0.6812  -0.1813  -0.1749  -0.2432  -0.4488
#> 
#> sigma: 0.177264
#> lambda (gene 1): 0.359176
#> epsilon (gene 1): -0.125606
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -2
#> LSphi: 6.8
#> LSnu (cell 1): -6.11822
#> LStheta (batch 1): -1.2
#> -----------------------------------------------------
#> Iteration 4540 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 656.588
#> delta (gene 1): 0.527193
#> phi (cell 1): 0.715976
#> s (cell 1): 0.760389
#> nu (cell 1): 0.418675
#> theta (batch 1): 0.349981
#> betas:    0.2432   0.1086   0.2061   0.6749   0.3242   1.3124   0.1462   0.3667  -0.5134  -0.0751  -0.7870  -0.6703
#> 
#> sigma: 0.172051
#> lambda (gene 1): 0.657169
#> epsilon (gene 1): -0.428936
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -2
#> LSphi: 6.8
#> LSnu (cell 1): -6.11822
#> LStheta (batch 1): -1.2
#> -----------------------------------------------------
#> Iteration 4560 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 697.015
#> delta (gene 1): 0.60156
#> phi (cell 1): 0.869968
#> s (cell 1): 0.240639
#> nu (cell 1): 0.39725
#> theta (batch 1): 0.211811
#> betas:    0.7286  -0.0972   0.2085   0.6886   0.9105   1.0645  -0.1663   0.7771  -0.2651   0.1506  -0.4082  -0.0979
#> 
#> sigma: 0.18474
#> lambda (gene 1): 0.941324
#> epsilon (gene 1): -0.291351
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.3
#> LSdelta (gene 1): -1.9
#> LSphi: 6.7
#> LSnu (cell 1): -6.01822
#> LStheta (batch 1): -1.1
#> -----------------------------------------------------
#> Iteration 4580 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 675.84
#> delta (gene 1): 0.652204
#> phi (cell 1): 0.837907
#> s (cell 1): 0.395996
#> nu (cell 1): 0.429429
#> theta (batch 1): 0.256247
#> betas:    1.0179  -0.1101  -0.3191   0.4674   0.6546   0.7800   0.6013   0.0541  -0.0650  -0.1004  -0.3342  -0.2976
#> 
#> sigma: 0.136481
#> lambda (gene 1): 0.771807
#> epsilon (gene 1): -0.180262
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.3
#> LSdelta (gene 1): -1.9
#> LSphi: 6.7
#> LSnu (cell 1): -6.01822
#> LStheta (batch 1): -1.1
#> -----------------------------------------------------
#> Iteration 4600 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 1223.49
#> delta (gene 1): 0.932906
#> phi (cell 1): 0.723173
#> s (cell 1): 0.327943
#> nu (cell 1): 0.41676
#> theta (batch 1): 0.0593314
#> betas:    0.0390  -0.0348   0.6552   0.7605   0.7265   1.2150   0.3623   0.4714   0.4480  -0.0917  -0.3450  -0.0689
#> 
#> sigma: 0.161482
#> lambda (gene 1): 0.977735
#> epsilon (gene 1): 0.289268
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -2
#> LSphi: 6.8
#> LSnu (cell 1): -5.91822
#> LStheta (batch 1): -1.2
#> -----------------------------------------------------
#> Iteration 4620 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 712.277
#> delta (gene 1): 0.534784
#> phi (cell 1): 0.700487
#> s (cell 1): 0.362054
#> nu (cell 1): 0.424742
#> theta (batch 1): 0.0117024
#> betas:    0.7306  -0.0588   0.0785   0.2898   0.7195   0.7970   0.8849  -0.1146  -0.0696  -0.0293  -0.4648  -0.3430
#> 
#> sigma: 0.14928
#> lambda (gene 1): 1.32215
#> epsilon (gene 1): -0.317651
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -2
#> LSphi: 6.8
#> LSnu (cell 1): -5.91822
#> LStheta (batch 1): -1.2
#> -----------------------------------------------------
#> Iteration 4640 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 837.404
#> delta (gene 1): 0.973433
#> phi (cell 1): 0.706602
#> s (cell 1): 0.534666
#> nu (cell 1): 0.419246
#> theta (batch 1): 0.043631
#> betas:    0.4289  -0.0594   0.8448   0.6595   0.6628   0.9748   0.7800   0.2655  -0.1545   0.3108  -0.4974  -0.2345
#> 
#> sigma: 0.198599
#> lambda (gene 1): 0.0819747
#> epsilon (gene 1): 0.250657
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -2
#> LSphi: 6.8
#> LSnu (cell 1): -5.91822
#> LStheta (batch 1): -1.2
#> -----------------------------------------------------
#> Iteration 4660 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 915.945
#> delta (gene 1): 0.677754
#> phi (cell 1): 0.761253
#> s (cell 1): 0.449457
#> nu (cell 1): 0.410267
#> theta (batch 1): 0.0854119
#> betas:    0.9816  -0.0375   0.6344   0.5115   0.5296   0.6458  -0.0142  -0.0258   0.2599  -0.2784  -0.6471  -0.6046
#> 
#> sigma: 0.171874
#> lambda (gene 1): 2.36632
#> epsilon (gene 1): -0.171199
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.3
#> LSdelta (gene 1): -1.9
#> LSphi: 6.7
#> LSnu (cell 1): -5.81822
#> LStheta (batch 1): -1.1
#> -----------------------------------------------------
#> Iteration 4680 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 571.731
#> delta (gene 1): 0.656272
#> phi (cell 1): 0.677595
#> s (cell 1): 0.579992
#> nu (cell 1): 0.434144
#> theta (batch 1): 0.204597
#> betas:    0.2611   0.0486   1.2404   0.3277   0.5959   1.4528   0.0940   0.1334  -0.3108   0.2739  -0.7666  -0.4413
#> 
#> sigma: 0.223601
#> lambda (gene 1): 0.560088
#> epsilon (gene 1): -0.272886
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.3
#> LSdelta (gene 1): -1.9
#> LSphi: 6.7
#> LSnu (cell 1): -5.81822
#> LStheta (batch 1): -1.1
#> -----------------------------------------------------
#> Iteration 4700 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 590.239
#> delta (gene 1): 0.82475
#> phi (cell 1): 0.650378
#> s (cell 1): 2.74826
#> nu (cell 1): 0.410483
#> theta (batch 1): 0.510654
#> betas:    0.4591  -0.0174   1.1323   0.1645   1.0308   0.5725   0.9284  -0.0095   0.5013  -0.0546  -0.7271  -0.1458
#> 
#> sigma: 0.14935
#> lambda (gene 1): 0.915392
#> epsilon (gene 1): -0.0659657
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.2
#> LSdelta (gene 1): -1.8
#> LSphi: 6.8
#> LSnu (cell 1): -5.71822
#> LStheta (batch 1): -1.2
#> -----------------------------------------------------
#> Iteration 4720 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 650.594
#> delta (gene 1): 0.707496
#> phi (cell 1): 0.654921
#> s (cell 1): 0.296139
#> nu (cell 1): 0.430434
#> theta (batch 1): 0.302287
#> betas:    1.2004  -0.0205   0.3041   0.1458   0.2635   0.8512   0.1916   0.3000  -0.2982  -0.2204  -0.4313  -1.2225
#> 
#> sigma: 0.146716
#> lambda (gene 1): 1.40943
#> epsilon (gene 1): -0.226257
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.2
#> LSdelta (gene 1): -1.8
#> LSphi: 6.8
#> LSnu (cell 1): -5.71822
#> LStheta (batch 1): -1.2
#> -----------------------------------------------------
#> Iteration 4740 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 798.183
#> delta (gene 1): 0.495234
#> phi (cell 1): 0.652334
#> s (cell 1): 0.253153
#> nu (cell 1): 0.427066
#> theta (batch 1): 0.260742
#> betas:    1.0882  -0.1683   0.3427   0.0153   0.8843   0.4419   0.8792  -0.1287   0.6370  -0.0833  -0.6793   0.2493
#> 
#> sigma: 0.164701
#> lambda (gene 1): 0.847866
#> epsilon (gene 1): -0.469041
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.2
#> LSdelta (gene 1): -1.8
#> LSphi: 6.8
#> LSnu (cell 1): -5.71822
#> LStheta (batch 1): -1.2
#> -----------------------------------------------------
#> Iteration 4760 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 728.35
#> delta (gene 1): 0.570126
#> phi (cell 1): 0.656316
#> s (cell 1): 0.620918
#> nu (cell 1): 0.431748
#> theta (batch 1): 0.326574
#> betas:    0.6813   0.0145   0.4237   0.6846   0.7985   0.7862   0.0553  -0.0142   0.2007  -0.6782  -0.0496  -0.9855
#> 
#> sigma: 0.136819
#> lambda (gene 1): 0.343447
#> epsilon (gene 1): -0.305823
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.3
#> LSdelta (gene 1): -1.7
#> LSphi: 6.9
#> LSnu (cell 1): -5.61822
#> LStheta (batch 1): -1.1
#> -----------------------------------------------------
#> Iteration 4780 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 854.24
#> delta (gene 1): 1.00068
#> phi (cell 1): 0.710564
#> s (cell 1): 0.56233
#> nu (cell 1): 0.42773
#> theta (batch 1): 0.162663
#> betas:    1.2513  -0.1639   0.0895   0.3885   0.9206   0.4252   0.5418  -0.2172   0.0061   0.0881  -0.4422   0.1873
#> 
#> sigma: 0.143194
#> lambda (gene 1): 2.26192
#> epsilon (gene 1): 0.115178
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.3
#> LSdelta (gene 1): -1.7
#> LSphi: 6.9
#> LSnu (cell 1): -5.61822
#> LStheta (batch 1): -1.1
#> -----------------------------------------------------
#> Iteration 4800 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 894.419
#> delta (gene 1): 0.553485
#> phi (cell 1): 0.700942
#> s (cell 1): 0.649375
#> nu (cell 1): 0.421448
#> theta (batch 1): 0.198846
#> betas:    1.4592  -0.2047  -0.2561   0.6847   0.5837   0.4407   0.3478   0.3087  -0.0832   0.0400  -0.5852  -0.0070
#> 
#> sigma: 0.110219
#> lambda (gene 1): 1.96812
#> epsilon (gene 1): -0.11288
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.8
#> LSphi: 7
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1.2
#> -----------------------------------------------------
#> Iteration 4820 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 581.415
#> delta (gene 1): 0.604692
#> phi (cell 1): 0.795619
#> s (cell 1): 0.925776
#> nu (cell 1): 0.420347
#> theta (batch 1): 0.35011
#> betas:    0.6091  -0.0558   0.1355   0.6641   0.2499   1.0580   0.3912  -0.0776   0.2596   0.0515  -0.8004  -0.0505
#> 
#> sigma: 0.153618
#> lambda (gene 1): 0.673192
#> epsilon (gene 1): -0.0808115
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.8
#> LSphi: 7
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1.2
#> -----------------------------------------------------
#> Iteration 4840 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 667.876
#> delta (gene 1): 0.691328
#> phi (cell 1): 0.687668
#> s (cell 1): 0.693303
#> nu (cell 1): 0.424919
#> theta (batch 1): 0.275754
#> betas:    0.8909  -0.1075   0.6859   0.4127   0.7812   0.5179   0.4620   0.3894  -0.3109   0.3191  -0.3120  -0.5898
#> 
#> sigma: 0.221071
#> lambda (gene 1): 1.65842
#> epsilon (gene 1): -0.106012
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.8
#> LSphi: 7
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1.2
#> -----------------------------------------------------
#> Iteration 4860 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 688.93
#> delta (gene 1): 0.636738
#> phi (cell 1): 0.74263
#> s (cell 1): 0.591042
#> nu (cell 1): 0.438799
#> theta (batch 1): 0.159457
#> betas:    0.4422  -0.0105   0.3881   0.4262   1.1091   0.5885   0.4183   0.3661  -0.2152   0.1632  -0.7707  -0.0357
#> 
#> sigma: 0.141174
#> lambda (gene 1): 1.5303
#> epsilon (gene 1): -0.274628
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.3
#> LSdelta (gene 1): -1.7
#> LSphi: 6.9
#> LSnu (cell 1): -5.61822
#> LStheta (batch 1): -1.1
#> -----------------------------------------------------
#> Iteration 4880 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 756.612
#> delta (gene 1): 0.859348
#> phi (cell 1): 0.794348
#> s (cell 1): 0.332692
#> nu (cell 1): 0.420942
#> theta (batch 1): 0.318417
#> betas:    0.1669   0.1748   0.5437   0.6333   0.6334   0.5611   0.1039   0.0358   0.2946  -0.9288  -0.7719  -0.9692
#> 
#> sigma: 0.182117
#> lambda (gene 1): 0.69513
#> epsilon (gene 1): 0.250528
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.3
#> LSdelta (gene 1): -1.7
#> LSphi: 6.9
#> LSnu (cell 1): -5.61822
#> LStheta (batch 1): -1.1
#> -----------------------------------------------------
#> Iteration 4900 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 719.131
#> delta (gene 1): 0.644975
#> phi (cell 1): 0.740866
#> s (cell 1): 0.721502
#> nu (cell 1): 0.407595
#> theta (batch 1): 0.365064
#> betas:    0.6525  -0.0437   1.1484  -0.2528   0.7168   1.0793   0.4518  -0.0887   0.2484  -0.0396  -0.3461  -0.4889
#> 
#> sigma: 0.15525
#> lambda (gene 1): 0.499325
#> epsilon (gene 1): -0.380381
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 4920 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 698.034
#> delta (gene 1): 0.689192
#> phi (cell 1): 0.735165
#> s (cell 1): 1.1996
#> nu (cell 1): 0.425567
#> theta (batch 1): 0.219502
#> betas:    1.1961  -0.1970   0.1055   0.2161   0.4170   0.9678   0.4955   0.3318  -0.0619  -0.0192  -0.1408   0.0861
#> 
#> sigma: 0.199174
#> lambda (gene 1): 1.24248
#> epsilon (gene 1): -0.1889
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 4940 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 695.153
#> delta (gene 1): 0.501943
#> phi (cell 1): 0.756578
#> s (cell 1): 0.520823
#> nu (cell 1): 0.428388
#> theta (batch 1): 0.0673934
#> betas:    0.9413  -0.1465   0.1456  -0.0652   0.6545   0.9432   0.7064   0.2577   0.0405   0.2223  -0.6259   0.1990
#> 
#> sigma: 0.203456
#> lambda (gene 1): 0.862084
#> epsilon (gene 1): -0.474365
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 4960 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 627.854
#> delta (gene 1): 0.691076
#> phi (cell 1): 0.808759
#> s (cell 1): 0.471172
#> nu (cell 1): 0.412812
#> theta (batch 1): 0.0756824
#> betas:    1.2032  -0.2335   0.5983   0.8364   0.4661   0.7747   0.2584   0.2623  -0.0118   0.1787  -0.0031  -0.1802
#> 
#> sigma: 0.141623
#> lambda (gene 1): 0.893593
#> epsilon (gene 1): -0.239563
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.5
#> LSdelta (gene 1): -1.5
#> LSphi: 7.1
#> LSnu (cell 1): -5.41822
#> LStheta (batch 1): -0.9
#> -----------------------------------------------------
#> Iteration 4980 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 700.303
#> delta (gene 1): 0.700406
#> phi (cell 1): 0.882286
#> s (cell 1): 0.298498
#> nu (cell 1): 0.418171
#> theta (batch 1): 0.369819
#> betas:    1.3417  -0.1986   0.4276   0.2908   0.8793   0.7164   0.2540  -0.0646   0.2196   0.0923  -0.4606  -0.1706
#> 
#> sigma: 0.230809
#> lambda (gene 1): 1.57042
#> epsilon (gene 1): -0.252079
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.5
#> LSdelta (gene 1): -1.5
#> LSphi: 7.1
#> LSnu (cell 1): -5.41822
#> LStheta (batch 1): -0.9
#> -----------------------------------------------------
#> End of Burn-in period.
#> -----------------------------------------------------
#> -----------------------------------------------------
#> Iteration 5000 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 495.147
#> delta (gene 1): 0.841352
#> phi (cell 1): 1.03287
#> s (cell 1): 2.07827
#> nu (cell 1): 0.441795
#> theta (batch 1): 0.331239
#> betas:    0.6921  -0.0162   0.6480   1.2028   0.1475   0.5975   0.4784  -0.3898   0.6508  -0.9667   0.1207  -0.6750
#> 
#> sigma: 0.18332
#> lambda (gene 1): 0.426813
#> epsilon (gene 1): -0.047719
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 5020 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 724.619
#> delta (gene 1): 0.769575
#> phi (cell 1): 1.02011
#> s (cell 1): 0.67217
#> nu (cell 1): 0.424205
#> theta (batch 1): 0.296361
#> betas:    1.7567  -0.3517   0.8302   0.2184   0.6250   0.5428   0.4094   0.2868   0.2377  -0.3415   0.3194   0.4111
#> 
#> sigma: 0.138534
#> lambda (gene 1): 2.82001
#> epsilon (gene 1): 0.0677743
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 5040 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 566.327
#> delta (gene 1): 0.716932
#> phi (cell 1): 1.01167
#> s (cell 1): 0.412197
#> nu (cell 1): 0.418183
#> theta (batch 1): 0.637074
#> betas:    0.3898  -0.0803   1.2810   0.9595   0.5985   0.3811   0.6037   0.2899   0.1361   0.0763  -0.3572   0.1384
#> 
#> sigma: 0.149439
#> lambda (gene 1): 0.976539
#> epsilon (gene 1): -0.203803
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 5060 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 612.056
#> delta (gene 1): 0.716065
#> phi (cell 1): 0.998505
#> s (cell 1): 0.607834
#> nu (cell 1): 0.418772
#> theta (batch 1): 0.247981
#> betas:    0.8739  -0.0338   1.3747   0.7091   0.4193   0.3670   0.3151   0.0158  -0.0226  -0.3398  -0.7050  -0.3381
#> 
#> sigma: 0.137828
#> lambda (gene 1): 2.92301
#> epsilon (gene 1): -0.00902563
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 5080 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 642.284
#> delta (gene 1): 0.860731
#> phi (cell 1): 0.929004
#> s (cell 1): 0.45127
#> nu (cell 1): 0.418597
#> theta (batch 1): 0.229215
#> betas:    0.9735  -0.1197   0.5877   0.8626   0.2660   1.1480   0.0137   0.0526   0.4660  -0.6857   0.2909  -0.3990
#> 
#> sigma: 0.181411
#> lambda (gene 1): 0.49204
#> epsilon (gene 1): -0.0672267
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 5100 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 736.239
#> delta (gene 1): 0.81494
#> phi (cell 1): 0.838147
#> s (cell 1): 0.691917
#> nu (cell 1): 0.433655
#> theta (batch 1): 0.124765
#> betas:    0.6980  -0.1824   0.3533   0.7783   1.1267   0.6710   0.4285   0.3036   0.2997  -0.0816  -0.0549   0.1575
#> 
#> sigma: 0.119184
#> lambda (gene 1): 0.587967
#> epsilon (gene 1): 0.113062
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 5120 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 789.12
#> delta (gene 1): 0.62638
#> phi (cell 1): 0.754152
#> s (cell 1): 0.5039
#> nu (cell 1): 0.41775
#> theta (batch 1): 0.290317
#> betas:    1.1367  -0.1017   0.4104   0.7763   0.9829   0.1146   0.3100   0.3159  -0.4016  -0.0668  -0.5451  -0.0993
#> 
#> sigma: 0.151883
#> lambda (gene 1): 0.996564
#> epsilon (gene 1): -0.2336
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 5140 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 764.992
#> delta (gene 1): 0.556255
#> phi (cell 1): 0.791472
#> s (cell 1): 0.759801
#> nu (cell 1): 0.427894
#> theta (batch 1): 0.207844
#> betas:    0.9301  -0.0453   0.8144   0.1693   0.9476   0.5949  -0.0415   0.2571  -0.4045  -0.2243  -0.1432  -0.9802
#> 
#> sigma: 0.19602
#> lambda (gene 1): 0.653471
#> epsilon (gene 1): -0.38921
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 5160 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 752.907
#> delta (gene 1): 0.663832
#> phi (cell 1): 0.768661
#> s (cell 1): 0.343058
#> nu (cell 1): 0.414467
#> theta (batch 1): 0.0333121
#> betas:    1.0542  -0.1456   0.5183   0.6710   0.4535   0.6395   0.3105   0.2291  -0.1783  -0.3272   0.2081  -0.2851
#> 
#> sigma: 0.131977
#> lambda (gene 1): 2.76311
#> epsilon (gene 1): -0.190256
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 5180 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 706.225
#> delta (gene 1): 0.89439
#> phi (cell 1): 0.802838
#> s (cell 1): 0.200895
#> nu (cell 1): 0.41865
#> theta (batch 1): 0.0938644
#> betas:    0.6987  -0.0801   0.1962   0.7464   0.6742   0.4911   0.3091   0.0981   0.0939  -0.1077  -0.4503  -0.2261
#> 
#> sigma: 0.13495
#> lambda (gene 1): 0.32222
#> epsilon (gene 1): 0.145533
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 5200 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 579.531
#> delta (gene 1): 0.836356
#> phi (cell 1): 0.753836
#> s (cell 1): 0.719317
#> nu (cell 1): 0.420049
#> theta (batch 1): 0.178613
#> betas:    0.9321  -0.0045   0.5617   0.6962   0.0781   0.6847   0.6856  -0.8703   0.2789  -0.4919  -0.8565  -0.4047
#> 
#> sigma: 0.17158
#> lambda (gene 1): 2.34086
#> epsilon (gene 1): 0.157654
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 5220 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 865.952
#> delta (gene 1): 0.709137
#> phi (cell 1): 0.768282
#> s (cell 1): 0.429128
#> nu (cell 1): 0.411488
#> theta (batch 1): 0.128072
#> betas:    1.3669  -0.0766   0.2578   0.9525   0.0401   0.6303   0.0476  -0.0105  -0.4862   0.0397  -0.3668  -1.0498
#> 
#> sigma: 0.178388
#> lambda (gene 1): 1.73923
#> epsilon (gene 1): -0.339869
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 5240 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 665.321
#> delta (gene 1): 0.533247
#> phi (cell 1): 0.812006
#> s (cell 1): 0.74675
#> nu (cell 1): 0.407633
#> theta (batch 1): 0.275603
#> betas:    0.1474  -0.0475   1.2450   0.7030   0.6564   0.7774   1.1393  -0.3127   0.4554  -0.3258   0.1509  -0.3420
#> 
#> sigma: 0.205115
#> lambda (gene 1): 0.435315
#> epsilon (gene 1): -0.421719
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 5260 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 684.219
#> delta (gene 1): 0.585491
#> phi (cell 1): 0.854453
#> s (cell 1): 0.410123
#> nu (cell 1): 0.41918
#> theta (batch 1): 0.0723418
#> betas:    1.3889  -0.2061   0.2612   0.7522   0.5902   0.6279   0.0325   0.0224   0.6579  -0.5205  -0.3709   0.4246
#> 
#> sigma: 0.219141
#> lambda (gene 1): 1.06537
#> epsilon (gene 1): -0.310472
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 5280 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 620.312
#> delta (gene 1): 0.652942
#> phi (cell 1): 0.788455
#> s (cell 1): 0.383421
#> nu (cell 1): 0.405005
#> theta (batch 1): 0.0442334
#> betas:    0.9674  -0.1091   0.3483   0.7742   0.6912   0.5671   0.1213   0.7174  -0.5248  -0.2373  -0.2000  -0.1022
#> 
#> sigma: 0.121745
#> lambda (gene 1): 1.0621
#> epsilon (gene 1): -0.0661567
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 5300 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 706.146
#> delta (gene 1): 1.03634
#> phi (cell 1): 0.867682
#> s (cell 1): 0.396822
#> nu (cell 1): 0.426942
#> theta (batch 1): 0.0570178
#> betas:    0.1058   0.1152   1.1949   0.1825   0.4242   1.1427   0.0059   0.4220  -0.2853  -0.3830  -0.7395  -0.3713
#> 
#> sigma: 0.156232
#> lambda (gene 1): 1.7592
#> epsilon (gene 1): 0.30961
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 5320 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 689.326
#> delta (gene 1): 0.654405
#> phi (cell 1): 0.872174
#> s (cell 1): 1.00664
#> nu (cell 1): 0.408868
#> theta (batch 1): 0.539015
#> betas:    0.8894  -0.1594   0.5708   0.6774   0.1712   0.9938   0.3275   0.2725  -0.0115  -0.1446  -0.0665   0.0827
#> 
#> sigma: 0.137414
#> lambda (gene 1): 0.800429
#> epsilon (gene 1): -0.146409
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 5340 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 514.18
#> delta (gene 1): 0.897159
#> phi (cell 1): 0.929925
#> s (cell 1): 0.853027
#> nu (cell 1): 0.432527
#> theta (batch 1): 0.0879232
#> betas:    0.7332  -0.0285   0.4955   0.2099   1.2107   0.4112   0.1259  -0.0891   0.3316  -0.3993  -0.2311  -0.6587
#> 
#> sigma: 0.11443
#> lambda (gene 1): 1.25856
#> epsilon (gene 1): -0.0882929
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 5360 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 748.928
#> delta (gene 1): 0.919764
#> phi (cell 1): 0.977573
#> s (cell 1): 0.428978
#> nu (cell 1): 0.416227
#> theta (batch 1): 0.174272
#> betas:    0.5145   0.0672   0.6124   1.0544   0.0635   1.2600  -0.6511   0.4572  -0.1038  -0.1813  -0.9201  -0.3878
#> 
#> sigma: 0.126439
#> lambda (gene 1): 0.542216
#> epsilon (gene 1): -0.0603845
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 5380 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 679.869
#> delta (gene 1): 0.646128
#> phi (cell 1): 0.874747
#> s (cell 1): 0.425035
#> nu (cell 1): 0.415302
#> theta (batch 1): 0.121989
#> betas:    1.6201  -0.1608   0.6501   0.5910   0.6989   0.0939   0.1543  -0.0094  -0.1309  -0.1272  -0.3854  -0.6329
#> 
#> sigma: 0.201676
#> lambda (gene 1): 0.2879
#> epsilon (gene 1): -0.300636
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 5400 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 621.046
#> delta (gene 1): 0.497867
#> phi (cell 1): 0.751481
#> s (cell 1): 0.513358
#> nu (cell 1): 0.420087
#> theta (batch 1): 0.0384665
#> betas:    1.0330  -0.1784   0.5933   0.3899   1.0228   0.7894   0.1347   0.4905   0.0358  -0.1437  -0.0094  -0.0644
#> 
#> sigma: 0.134309
#> lambda (gene 1): 0.52838
#> epsilon (gene 1): -0.508193
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 5420 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 690.753
#> delta (gene 1): 0.748643
#> phi (cell 1): 0.738383
#> s (cell 1): 0.753093
#> nu (cell 1): 0.4206
#> theta (batch 1): 0.528986
#> betas:    0.8580  -0.1455   1.0174   0.5688   0.8816   0.4146   0.6033   0.0797   0.1308  -0.0473  -0.2377  -0.1060
#> 
#> sigma: 0.158158
#> lambda (gene 1): 1.13848
#> epsilon (gene 1): -0.043559
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 5440 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 733.594
#> delta (gene 1): 0.730195
#> phi (cell 1): 0.874484
#> s (cell 1): 0.894857
#> nu (cell 1): 0.429859
#> theta (batch 1): 0.441969
#> betas:    1.3152  -0.1143   0.8386   0.5547   0.3016   0.5591   0.4704  -0.3897   0.0857  -0.3231   0.0241  -0.9888
#> 
#> sigma: 0.152666
#> lambda (gene 1): 1.40753
#> epsilon (gene 1): -0.268844
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 5460 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 792.116
#> delta (gene 1): 0.512198
#> phi (cell 1): 0.785216
#> s (cell 1): 0.390745
#> nu (cell 1): 0.418741
#> theta (batch 1): 0.0944472
#> betas:    0.8906  -0.0923   0.5153   1.0707   0.4739   0.7242   0.1816   0.0686   0.4633  -0.8949   0.2894  -0.4344
#> 
#> sigma: 0.156113
#> lambda (gene 1): 1.1846
#> epsilon (gene 1): -0.472224
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 5480 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 658.84
#> delta (gene 1): 0.6869
#> phi (cell 1): 0.704342
#> s (cell 1): 0.377142
#> nu (cell 1): 0.422821
#> theta (batch 1): 0.298475
#> betas:    1.5572  -0.2528  -0.0839   1.0177   0.3607   0.9825   0.2350  -0.5461   0.6885  -0.1988  -0.4659   0.5025
#> 
#> sigma: 0.234748
#> lambda (gene 1): 1.16469
#> epsilon (gene 1): -0.186179
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 5500 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 660.444
#> delta (gene 1): 0.722191
#> phi (cell 1): 0.608161
#> s (cell 1): 0.530289
#> nu (cell 1): 0.422978
#> theta (batch 1): 0.0989868
#> betas:    1.7377  -0.1428   0.3511   0.4263   0.2522   0.7072  -0.0393  -0.1656  -0.1229  -0.5408  -0.4992  -0.3069
#> 
#> sigma: 0.189412
#> lambda (gene 1): 2.42826
#> epsilon (gene 1): 0.00932264
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 5520 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 784.899
#> delta (gene 1): 0.638058
#> phi (cell 1): 0.672792
#> s (cell 1): 1.05984
#> nu (cell 1): 0.428932
#> theta (batch 1): 0.282446
#> betas:    1.4509  -0.1464   0.0848   0.2829   0.9541   0.4693  -0.1740   0.2040  -0.0633  -0.1493  -0.6368   0.0741
#> 
#> sigma: 0.243199
#> lambda (gene 1): 0.534284
#> epsilon (gene 1): -0.310912
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 5540 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 849.975
#> delta (gene 1): 0.974504
#> phi (cell 1): 0.82948
#> s (cell 1): 1.81158
#> nu (cell 1): 0.418735
#> theta (batch 1): 0.552659
#> betas:    0.2850  -0.0502   0.8552   0.5037   0.7930   0.9057   0.3884   0.0923   0.2433  -0.1149  -0.3826   0.0474
#> 
#> sigma: 0.121651
#> lambda (gene 1): 2.15122
#> epsilon (gene 1): 0.222422
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 5560 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 669.981
#> delta (gene 1): 0.899051
#> phi (cell 1): 0.644499
#> s (cell 1): 0.324596
#> nu (cell 1): 0.433049
#> theta (batch 1): 0.21046
#> betas:    0.3646  -0.0065   0.4870   1.3257   0.4658   0.8776   0.3984   0.0990   0.1101  -0.4609   0.1099  -0.6271
#> 
#> sigma: 0.163458
#> lambda (gene 1): 1.72561
#> epsilon (gene 1): 0.021923
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 5580 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 632.799
#> delta (gene 1): 0.710377
#> phi (cell 1): 0.687342
#> s (cell 1): 0.788505
#> nu (cell 1): 0.406794
#> theta (batch 1): 0.394758
#> betas:    1.0426  -0.1216   0.6318   0.4362   0.6412   0.5706   0.2307   0.2993   0.1360  -0.2063  -0.4068  -0.3031
#> 
#> sigma: 0.175937
#> lambda (gene 1): 1.85925
#> epsilon (gene 1): -0.132636
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 5600 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 700.004
#> delta (gene 1): 0.591879
#> phi (cell 1): 0.748979
#> s (cell 1): 0.843379
#> nu (cell 1): 0.414154
#> theta (batch 1): 0.200639
#> betas:    0.7092  -0.0477   0.6420   1.1952   0.3468   0.5085   0.7237  -0.1897  -0.0758  -0.5295   0.1355  -0.6643
#> 
#> sigma: 0.151901
#> lambda (gene 1): 1.18713
#> epsilon (gene 1): -0.23612
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 5620 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 813.728
#> delta (gene 1): 0.679481
#> phi (cell 1): 0.637644
#> s (cell 1): 0.3697
#> nu (cell 1): 0.426281
#> theta (batch 1): 0.303455
#> betas:    0.5842  -0.0758   0.5546   0.7857   1.1411   0.3559   0.2887   0.4099   0.0033  -0.3290  -0.0772  -0.0153
#> 
#> sigma: 0.174016
#> lambda (gene 1): 0.415645
#> epsilon (gene 1): -0.175171
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 5640 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 649.001
#> delta (gene 1): 0.553093
#> phi (cell 1): 0.729102
#> s (cell 1): 0.302233
#> nu (cell 1): 0.414201
#> theta (batch 1): 0.360524
#> betas:    0.6016   0.0110   0.7022   1.3925  -0.1489   0.5013   0.3967   0.1610  -0.1988  -0.3731  -0.3164  -0.6348
#> 
#> sigma: 0.157847
#> lambda (gene 1): 0.449813
#> epsilon (gene 1): -0.389054
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 5660 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 869.834
#> delta (gene 1): 0.630403
#> phi (cell 1): 0.739085
#> s (cell 1): 2.21321
#> nu (cell 1): 0.413399
#> theta (batch 1): 0.200454
#> betas:    1.1583  -0.0906   0.7445   0.1549   1.1991   0.1957   0.0029   0.1771   0.0276  -0.4021  -0.5361  -0.0807
#> 
#> sigma: 0.140339
#> lambda (gene 1): 0.980166
#> epsilon (gene 1): -0.240571
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 5680 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 742.184
#> delta (gene 1): 0.974496
#> phi (cell 1): 0.686067
#> s (cell 1): 0.422934
#> nu (cell 1): 0.42128
#> theta (batch 1): 0.430449
#> betas:    1.3439  -0.2595   0.9960   0.4628   0.6197   0.0865   0.7356   0.3595  -0.2661   0.3290  -0.2005   0.1640
#> 
#> sigma: 0.127116
#> lambda (gene 1): 0.530411
#> epsilon (gene 1): 0.205575
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 5700 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 759.342
#> delta (gene 1): 0.635912
#> phi (cell 1): 0.778409
#> s (cell 1): 0.763026
#> nu (cell 1): 0.420933
#> theta (batch 1): 0.258067
#> betas:    0.6261   0.0397   0.5104   0.5226   0.9615   0.4259  -0.1477   0.1476  -0.0981  -0.4432  -0.7174  -0.4477
#> 
#> sigma: 0.128151
#> lambda (gene 1): 0.567581
#> epsilon (gene 1): -0.187938
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 5720 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 606.193
#> delta (gene 1): 0.706889
#> phi (cell 1): 0.823864
#> s (cell 1): 0.383518
#> nu (cell 1): 0.425728
#> theta (batch 1): 0.0197522
#> betas:    1.0062  -0.0735   0.6558   0.1894   1.1935   0.0510   0.4494  -0.0235  -0.0794  -0.4257  -0.0925  -0.4887
#> 
#> sigma: 0.161071
#> lambda (gene 1): 0.684901
#> epsilon (gene 1): -0.186037
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 5740 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 741.921
#> delta (gene 1): 0.704227
#> phi (cell 1): 0.846704
#> s (cell 1): 0.454802
#> nu (cell 1): 0.423782
#> theta (batch 1): 0.0765913
#> betas:    1.4007  -0.1783   0.8527  -0.0116   0.3973   1.1093  -0.2552   0.0802  -0.0658  -0.0762  -0.4731   0.3327
#> 
#> sigma: 0.163799
#> lambda (gene 1): 0.658274
#> epsilon (gene 1): -0.194018
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 5760 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 541.179
#> delta (gene 1): 0.581579
#> phi (cell 1): 0.736727
#> s (cell 1): 0.729197
#> nu (cell 1): 0.425254
#> theta (batch 1): 0.165758
#> betas:    1.5463  -0.0821   0.0311   0.1990   0.8733   0.1307   0.2544  -0.2164  -0.0953  -0.5267  -0.7939  -0.1434
#> 
#> sigma: 0.155221
#> lambda (gene 1): 0.544583
#> epsilon (gene 1): -0.272491
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 5780 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 631.167
#> delta (gene 1): 0.689301
#> phi (cell 1): 0.685111
#> s (cell 1): 0.870543
#> nu (cell 1): 0.445533
#> theta (batch 1): 0.104218
#> betas:    0.6243   0.0163   0.6634   0.7741   0.9684  -0.0499   0.5415   0.0741  -0.0441  -0.7716  -0.1071  -0.3007
#> 
#> sigma: 0.176149
#> lambda (gene 1): 1.1188
#> epsilon (gene 1): -0.173101
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 5800 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 726.41
#> delta (gene 1): 0.605395
#> phi (cell 1): 0.85095
#> s (cell 1): 0.274382
#> nu (cell 1): 0.42355
#> theta (batch 1): 0.206744
#> betas:    1.0292  -0.1008   0.7420   0.3847   0.6148   0.9736   0.2227  -0.3440   0.1586  -0.0004  -0.6975  -0.0117
#> 
#> sigma: 0.126348
#> lambda (gene 1): 1.19659
#> epsilon (gene 1): -0.365038
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 5820 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 575.195
#> delta (gene 1): 0.798825
#> phi (cell 1): 0.892377
#> s (cell 1): 0.607834
#> nu (cell 1): 0.41318
#> theta (batch 1): 0.0741937
#> betas:    0.5199   0.0249   0.1944   0.7017   0.7919   0.3381   0.8215  -0.3302  -0.4077  -0.0911  -0.4762  -0.2683
#> 
#> sigma: 0.129731
#> lambda (gene 1): 1.29381
#> epsilon (gene 1): -0.0732441
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 5840 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 673.767
#> delta (gene 1): 0.588963
#> phi (cell 1): 0.968266
#> s (cell 1): 0.237081
#> nu (cell 1): 0.429983
#> theta (batch 1): 0.0922194
#> betas:    0.9574  -0.1689   0.4688   0.6338   1.1743   0.3403   0.5811   0.0962   0.2040   0.1220  -0.4781   0.3220
#> 
#> sigma: 0.197855
#> lambda (gene 1): 0.940407
#> epsilon (gene 1): -0.387146
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 5860 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 722.402
#> delta (gene 1): 0.957825
#> phi (cell 1): 1.01246
#> s (cell 1): 0.770091
#> nu (cell 1): 0.429781
#> theta (batch 1): 0.112167
#> betas:    1.2168  -0.1091   0.3803   0.6758   0.1718   1.0101  -0.2222   0.3850  -0.0674  -0.3930  -0.3396  -0.4608
#> 
#> sigma: 0.14364
#> lambda (gene 1): 1.46914
#> epsilon (gene 1): 0.218061
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 5880 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 708.432
#> delta (gene 1): 0.590575
#> phi (cell 1): 0.923286
#> s (cell 1): 0.337799
#> nu (cell 1): 0.412218
#> theta (batch 1): 0.246321
#> betas:    0.7677  -0.0647   0.4948   0.6884   0.5075   0.4927   0.3376   0.1273  -0.0354  -0.3279  -0.1712  -0.3247
#> 
#> sigma: 0.147999
#> lambda (gene 1): 0.276888
#> epsilon (gene 1): -0.329285
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 5900 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 648.453
#> delta (gene 1): 0.546009
#> phi (cell 1): 0.915697
#> s (cell 1): 0.362136
#> nu (cell 1): 0.406417
#> theta (batch 1): 0.186708
#> betas:    1.1916  -0.1180   0.8815   0.4281   0.7161   0.3798   0.3316  -0.0649   0.3845  -0.4175  -0.5531   0.1230
#> 
#> sigma: 0.208416
#> lambda (gene 1): 0.45216
#> epsilon (gene 1): -0.458091
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 5920 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 623.939
#> delta (gene 1): 0.491528
#> phi (cell 1): 0.801659
#> s (cell 1): 0.36444
#> nu (cell 1): 0.434566
#> theta (batch 1): 0.506554
#> betas:    0.9925  -0.1941   0.3579   1.1160   0.5767   0.1507   0.9663   0.2682  -0.1868   0.1611  -0.3213   0.1946
#> 
#> sigma: 0.18747
#> lambda (gene 1): 1.78363
#> epsilon (gene 1): -0.352106
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 5940 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 860.943
#> delta (gene 1): 0.558085
#> phi (cell 1): 0.748891
#> s (cell 1): 0.61519
#> nu (cell 1): 0.417021
#> theta (batch 1): 0.111974
#> betas:    0.7072  -0.0563   0.3322   0.9386   1.1933   0.5057   0.3335  -0.0351  -0.0100  -0.2757  -0.6137   0.0472
#> 
#> sigma: 0.185795
#> lambda (gene 1): 1.03967
#> epsilon (gene 1): -0.186405
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 5960 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 808.397
#> delta (gene 1): 0.650197
#> phi (cell 1): 0.837732
#> s (cell 1): 0.51956
#> nu (cell 1): 0.419576
#> theta (batch 1): 0.118997
#> betas:    0.7049  -0.0961   0.4425   0.8247   0.6791   0.5550   0.2262   0.7251  -0.4109   0.1973  -0.4212  -0.0559
#> 
#> sigma: 0.124955
#> lambda (gene 1): 1.018
#> epsilon (gene 1): -0.250429
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 5980 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 761.614
#> delta (gene 1): 0.741122
#> phi (cell 1): 0.944922
#> s (cell 1): 0.658812
#> nu (cell 1): 0.408842
#> theta (batch 1): 0.243444
#> betas:    1.4114  -0.2119   0.4995   0.7028   0.4001   0.3992   0.4209  -0.0599   0.6278  -0.6686   0.0195  -0.2329
#> 
#> sigma: 0.144037
#> lambda (gene 1): 0.799304
#> epsilon (gene 1): 0.00728885
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 6000 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 567.201
#> delta (gene 1): 0.645593
#> phi (cell 1): 0.900382
#> s (cell 1): 0.641074
#> nu (cell 1): 0.422267
#> theta (batch 1): 0.379915
#> betas:    1.0112  -0.1303   0.7913   0.4922   0.7443   0.7170   0.2917  -0.3599   0.6346  -0.2734  -0.1856  -0.4108
#> 
#> sigma: 0.123545
#> lambda (gene 1): 0.550224
#> epsilon (gene 1): -0.396111
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 6020 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 667.429
#> delta (gene 1): 0.795956
#> phi (cell 1): 0.76537
#> s (cell 1): 0.315966
#> nu (cell 1): 0.411871
#> theta (batch 1): 0.109966
#> betas:    1.1345  -0.0335   0.4744   0.5480   0.5750   0.4938   0.2933   0.0075  -0.6036  -0.0386  -0.4650  -0.7799
#> 
#> sigma: 0.158572
#> lambda (gene 1): 0.342369
#> epsilon (gene 1): -0.140673
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 6040 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 821.58
#> delta (gene 1): 0.857167
#> phi (cell 1): 0.760005
#> s (cell 1): 0.650712
#> nu (cell 1): 0.427668
#> theta (batch 1): 0.605447
#> betas:    0.5045  -0.0242   0.6345   0.8633   0.2552   1.0877   0.6508  -0.4118   0.0057   0.2573  -0.8929  -0.3171
#> 
#> sigma: 0.224959
#> lambda (gene 1): 0.798139
#> epsilon (gene 1): 0.077927
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 6060 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 1028
#> delta (gene 1): 0.53445
#> phi (cell 1): 0.757388
#> s (cell 1): 0.460778
#> nu (cell 1): 0.42034
#> theta (batch 1): 0.201378
#> betas:    0.9689  -0.1879   0.6146   0.7864   0.3130   1.1009   0.1385   0.0851   0.8125  -0.8801   0.3510  -0.0235
#> 
#> sigma: 0.160047
#> lambda (gene 1): 1.02319
#> epsilon (gene 1): -0.282926
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 6080 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 577.498
#> delta (gene 1): 0.78611
#> phi (cell 1): 0.889186
#> s (cell 1): 0.187683
#> nu (cell 1): 0.403067
#> theta (batch 1): 0.255941
#> betas:    0.3538  -0.0511   0.1872   1.4069   0.4264   0.8790   0.5574   0.0200  -0.0340   0.1866  -0.5734   0.1131
#> 
#> sigma: 0.142408
#> lambda (gene 1): 0.737676
#> epsilon (gene 1): -0.0395912
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 6100 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 808.134
#> delta (gene 1): 0.636521
#> phi (cell 1): 0.888421
#> s (cell 1): 0.908846
#> nu (cell 1): 0.413146
#> theta (batch 1): 0.141961
#> betas:    1.0544  -0.1218   0.5254   0.3034   0.4721   0.6787   0.5849  -0.4741   0.3995  -0.1570  -0.5363   0.0866
#> 
#> sigma: 0.161249
#> lambda (gene 1): 0.669133
#> epsilon (gene 1): -0.336755
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 6120 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 612.865
#> delta (gene 1): 0.60523
#> phi (cell 1): 0.905674
#> s (cell 1): 0.670223
#> nu (cell 1): 0.416218
#> theta (batch 1): 0.346673
#> betas:    1.5211  -0.1243  -0.0092   0.3905   0.7411   0.2481   0.1488   0.2468  -0.6566   0.1286  -0.7305  -0.2310
#> 
#> sigma: 0.141214
#> lambda (gene 1): 0.733831
#> epsilon (gene 1): -0.3315
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 6140 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 805.33
#> delta (gene 1): 0.586632
#> phi (cell 1): 0.853159
#> s (cell 1): 0.407338
#> nu (cell 1): 0.419637
#> theta (batch 1): 0.318832
#> betas:    0.5308  -0.1105   0.7153   1.0476   0.6124   0.3589   0.7953   0.0781   0.1741   0.0235   0.1198  -0.4186
#> 
#> sigma: 0.161681
#> lambda (gene 1): 0.632806
#> epsilon (gene 1): -0.479342
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 6160 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 745.58
#> delta (gene 1): 0.864718
#> phi (cell 1): 0.788397
#> s (cell 1): 0.413644
#> nu (cell 1): 0.421538
#> theta (batch 1): 0.230418
#> betas:    1.2933  -0.0864   0.6082   0.3653   0.6646   0.5596  -0.0717   0.0730  -0.3365   0.2484  -0.7979  -0.3809
#> 
#> sigma: 0.172753
#> lambda (gene 1): 1.22117
#> epsilon (gene 1): -0.187939
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 6180 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 605.974
#> delta (gene 1): 0.690136
#> phi (cell 1): 0.803171
#> s (cell 1): 0.468557
#> nu (cell 1): 0.399095
#> theta (batch 1): 0.262524
#> betas:    0.1524  -0.0273   0.5171   1.4018   0.6748   0.6922   0.2471   0.7836  -0.3257  -0.1693  -0.0207  -0.2317
#> 
#> sigma: 0.159376
#> lambda (gene 1): 0.944834
#> epsilon (gene 1): -0.0546723
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 6200 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 741.817
#> delta (gene 1): 0.756173
#> phi (cell 1): 0.726567
#> s (cell 1): 0.203266
#> nu (cell 1): 0.42041
#> theta (batch 1): 0.49315
#> betas:    0.9052   0.0055   0.6650   0.5354   0.3699   1.1168  -0.2424   0.0800  -0.2129  -0.7600  -0.1694  -0.7343
#> 
#> sigma: 0.150246
#> lambda (gene 1): 3.52862
#> epsilon (gene 1): 0.00508362
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 6220 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 633.364
#> delta (gene 1): 0.574921
#> phi (cell 1): 0.801258
#> s (cell 1): 0.791813
#> nu (cell 1): 0.41788
#> theta (batch 1): 0.215465
#> betas:    1.5623  -0.1512   0.4589   0.4733   0.4328   0.6251   0.1233   0.2224  -0.4130   0.0935  -1.1994   0.5275
#> 
#> sigma: 0.169314
#> lambda (gene 1): 0.712861
#> epsilon (gene 1): -0.227173
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 6240 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 625.405
#> delta (gene 1): 0.746857
#> phi (cell 1): 0.715957
#> s (cell 1): 0.999833
#> nu (cell 1): 0.425746
#> theta (batch 1): 0.582819
#> betas:    0.6743  -0.0561   0.6781   0.7979   0.9728   0.1130   0.3283   0.6717  -0.2691  -0.2851  -0.4700   0.0720
#> 
#> sigma: 0.190212
#> lambda (gene 1): 1.19117
#> epsilon (gene 1): 0.0495308
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 6260 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 637.37
#> delta (gene 1): 0.498261
#> phi (cell 1): 0.714509
#> s (cell 1): 1.09921
#> nu (cell 1): 0.406659
#> theta (batch 1): 0.500018
#> betas:    0.7612  -0.0636   1.1496   0.8858   0.5419   0.6309   0.5484  -0.0947  -0.1452  -0.3593  -0.0924  -0.2797
#> 
#> sigma: 0.112572
#> lambda (gene 1): 0.665103
#> epsilon (gene 1): -0.431336
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 6280 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 655.638
#> delta (gene 1): 0.636496
#> phi (cell 1): 0.705434
#> s (cell 1): 0.535604
#> nu (cell 1): 0.429755
#> theta (batch 1): 0.449112
#> betas:    0.8854  -0.1391   0.6939   0.7503   0.4828   0.8954   0.0940   0.2556   0.0893  -0.0920  -0.4577   0.2598
#> 
#> sigma: 0.145818
#> lambda (gene 1): 0.720821
#> epsilon (gene 1): -0.164732
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 6300 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 763.412
#> delta (gene 1): 0.601335
#> phi (cell 1): 0.67305
#> s (cell 1): 0.556822
#> nu (cell 1): 0.421198
#> theta (batch 1): 0.380346
#> betas:    1.3364  -0.1701   0.7805   0.1490   0.6443   0.5358   0.0943   0.1378  -0.0742   0.0239  -0.6023   0.0032
#> 
#> sigma: 0.162447
#> lambda (gene 1): 1.57667
#> epsilon (gene 1): -0.264226
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 6320 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 696.932
#> delta (gene 1): 0.596211
#> phi (cell 1): 0.621069
#> s (cell 1): 0.393419
#> nu (cell 1): 0.420013
#> theta (batch 1): 0.0214306
#> betas:    0.5110   0.0379  -0.0944   1.3924   0.7657   0.4637   0.1544  -0.0775   0.3145  -0.9135  -0.1626  -0.7844
#> 
#> sigma: 0.144646
#> lambda (gene 1): 3.90977
#> epsilon (gene 1): -0.212767
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 6340 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 639.62
#> delta (gene 1): 0.867138
#> phi (cell 1): 0.61868
#> s (cell 1): 0.35213
#> nu (cell 1): 0.403265
#> theta (batch 1): 0.0215306
#> betas:    1.3357  -0.2143   0.9419   0.5348   0.1553   0.6946   0.5532   0.0168   0.0822  -0.2362   0.2130  -0.2467
#> 
#> sigma: 0.163372
#> lambda (gene 1): 0.199649
#> epsilon (gene 1): 0.0147993
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 6360 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 646.08
#> delta (gene 1): 0.856102
#> phi (cell 1): 0.631939
#> s (cell 1): 0.445886
#> nu (cell 1): 0.43528
#> theta (batch 1): 0.0164159
#> betas:    0.8127  -0.0766   0.7636   0.8663   0.3972   0.4742   0.3581   0.0267   0.0709  -0.0976  -0.8343   0.2927
#> 
#> sigma: 0.137262
#> lambda (gene 1): 1.6013
#> epsilon (gene 1): 0.124513
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 6380 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 642.096
#> delta (gene 1): 0.653373
#> phi (cell 1): 0.692019
#> s (cell 1): 1.26894
#> nu (cell 1): 0.409592
#> theta (batch 1): 0.246091
#> betas:    0.9717  -0.2424   0.7545   1.0537   0.3601   1.1134   0.1391   0.3497   0.1151   0.3896  -0.0431   0.2333
#> 
#> sigma: 0.154455
#> lambda (gene 1): 0.620216
#> epsilon (gene 1): -0.363956
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 6400 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 802.835
#> delta (gene 1): 0.598025
#> phi (cell 1): 0.572785
#> s (cell 1): 0.419846
#> nu (cell 1): 0.419594
#> theta (batch 1): 0.295364
#> betas:    0.8245  -0.0822  -0.0257   1.1138   0.6533   0.6764  -0.0097   0.2979  -0.0312   0.1026  -0.6618  -0.3031
#> 
#> sigma: 0.116835
#> lambda (gene 1): 2.09974
#> epsilon (gene 1): -0.345031
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 6420 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 801.393
#> delta (gene 1): 0.842386
#> phi (cell 1): 0.643875
#> s (cell 1): 0.589588
#> nu (cell 1): 0.400615
#> theta (batch 1): 0.289369
#> betas:    1.3068  -0.2310   0.3098   0.1629   0.7935   0.7841   0.1668   0.3120   0.2679  -0.1100  -0.6375   0.5737
#> 
#> sigma: 0.163775
#> lambda (gene 1): 1.2281
#> epsilon (gene 1): 0.239194
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 6440 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 737.406
#> delta (gene 1): 0.420033
#> phi (cell 1): 0.757446
#> s (cell 1): 0.381574
#> nu (cell 1): 0.416425
#> theta (batch 1): 0.201068
#> betas:    0.6292   0.0196   0.8433   0.6398   1.0056   0.2124   0.3026   0.1064  -0.2956  -0.1020  -0.6219  -0.6962
#> 
#> sigma: 0.142935
#> lambda (gene 1): 0.476828
#> epsilon (gene 1): -0.690153
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 6460 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 560.258
#> delta (gene 1): 0.542979
#> phi (cell 1): 0.831912
#> s (cell 1): 0.362638
#> nu (cell 1): 0.411801
#> theta (batch 1): 0.183654
#> betas:    1.0028  -0.0666   0.6578   0.7499   0.8142   0.0198   0.4539   0.1287  -0.0906  -0.2349  -0.4311  -0.5728
#> 
#> sigma: 0.133943
#> lambda (gene 1): 0.766955
#> epsilon (gene 1): -0.424994
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 6480 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 641.093
#> delta (gene 1): 0.702826
#> phi (cell 1): 0.799171
#> s (cell 1): 0.328358
#> nu (cell 1): 0.411801
#> theta (batch 1): 0.404111
#> betas:    0.9487  -0.1799   0.9349   0.7922   0.3365   0.5184   0.9720  -0.0169  -0.0779   0.1154  -0.1085   0.0061
#> 
#> sigma: 0.215413
#> lambda (gene 1): 0.727564
#> epsilon (gene 1): -0.119002
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 6500 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 474.651
#> delta (gene 1): 0.738382
#> phi (cell 1): 0.735378
#> s (cell 1): 0.273365
#> nu (cell 1): 0.422465
#> theta (batch 1): 0.148014
#> betas:    1.5604  -0.0637   0.8639   0.4131   0.2295   0.6278  -0.3487  -0.1348   0.0347  -0.7453  -0.8730  -0.3185
#> 
#> sigma: 0.184985
#> lambda (gene 1): 0.458893
#> epsilon (gene 1): 0.0768837
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 6520 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 564.985
#> delta (gene 1): 0.515131
#> phi (cell 1): 0.787898
#> s (cell 1): 0.476322
#> nu (cell 1): 0.421198
#> theta (batch 1): 0.248274
#> betas:    0.7516  -0.0990   0.4924   0.5386   0.9600   0.0852   0.9422   0.0215   0.1611  -0.4505  -0.3262   0.1508
#> 
#> sigma: 0.130526
#> lambda (gene 1): 0.621143
#> epsilon (gene 1): -0.244828
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 6540 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 541.511
#> delta (gene 1): 0.574495
#> phi (cell 1): 0.75111
#> s (cell 1): 0.291303
#> nu (cell 1): 0.431984
#> theta (batch 1): 0.308053
#> betas:    0.3384  -0.0172   1.3058   0.2709   1.0536   0.8019   0.2993   0.0412   0.3405  -0.4771  -0.1939  -0.3706
#> 
#> sigma: 0.145893
#> lambda (gene 1): 0.565279
#> epsilon (gene 1): -0.289772
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 6560 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 567.21
#> delta (gene 1): 0.60833
#> phi (cell 1): 0.699232
#> s (cell 1): 0.621095
#> nu (cell 1): 0.421568
#> theta (batch 1): 0.203092
#> betas:    1.2487  -0.1999   0.2833   0.6512   0.8018   0.3626  -0.0277   0.3293   0.2039  -0.2160   0.0431   0.1657
#> 
#> sigma: 0.218606
#> lambda (gene 1): 0.925012
#> epsilon (gene 1): -0.483572
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 6580 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 556.629
#> delta (gene 1): 0.891652
#> phi (cell 1): 0.810876
#> s (cell 1): 0.917242
#> nu (cell 1): 0.421568
#> theta (batch 1): 0.602066
#> betas:    0.7471  -0.0796   0.4155   0.8190   1.2156   0.0889   0.7722  -0.2561   0.3487  -0.4663  -0.0529  -0.3078
#> 
#> sigma: 0.162822
#> lambda (gene 1): 0.612051
#> epsilon (gene 1): 0.0634404
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 6600 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 713.491
#> delta (gene 1): 0.836813
#> phi (cell 1): 0.801744
#> s (cell 1): 0.374593
#> nu (cell 1): 0.413091
#> theta (batch 1): 0.23293
#> betas:    0.7093   0.0828   0.1034   0.8971   0.7800   0.4193   0.1295  -0.1797  -0.3186  -0.2215  -0.7838  -0.9211
#> 
#> sigma: 0.125763
#> lambda (gene 1): 1.83077
#> epsilon (gene 1): -0.112136
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 6620 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 731.682
#> delta (gene 1): 0.811891
#> phi (cell 1): 0.771967
#> s (cell 1): 0.389271
#> nu (cell 1): 0.431469
#> theta (batch 1): 0.140993
#> betas:    0.6317  -0.1131   0.5662   0.6873   0.5599   0.8014   0.4217  -0.1858   0.6740  -0.2352  -0.5700   0.5665
#> 
#> sigma: 0.242423
#> lambda (gene 1): 1.26459
#> epsilon (gene 1): 0.00101828
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 6640 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 633.893
#> delta (gene 1): 0.602273
#> phi (cell 1): 0.756139
#> s (cell 1): 0.411558
#> nu (cell 1): 0.420705
#> theta (batch 1): 0.330641
#> betas:    0.6993  -0.0887   0.7843   0.8320   0.7615   0.4730   0.4662  -0.0322   0.5520  -0.5883  -0.3674   0.2216
#> 
#> sigma: 0.16122
#> lambda (gene 1): 1.23996
#> epsilon (gene 1): -0.183611
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 6660 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 712.828
#> delta (gene 1): 0.721411
#> phi (cell 1): 0.775922
#> s (cell 1): 0.62587
#> nu (cell 1): 0.423038
#> theta (batch 1): 0.157318
#> betas:    0.1538   0.0009   0.1912   1.1812   0.6920   0.3668   0.6139   0.3559   0.3358  -0.8041  -0.0552  -0.1243
#> 
#> sigma: 0.151739
#> lambda (gene 1): 0.806303
#> epsilon (gene 1): 0.0773466
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 6680 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 625.699
#> delta (gene 1): 0.642202
#> phi (cell 1): 0.69879
#> s (cell 1): 0.435981
#> nu (cell 1): 0.4229
#> theta (batch 1): 0.21652
#> betas:    0.4109  -0.0946   0.8080   0.9542   0.5462   1.1332   0.1398   0.3069   0.2554  -0.2155  -0.0091  -0.0191
#> 
#> sigma: 0.164138
#> lambda (gene 1): 2.2655
#> epsilon (gene 1): -0.235681
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 6700 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 744.579
#> delta (gene 1): 0.728457
#> phi (cell 1): 0.765395
#> s (cell 1): 0.583926
#> nu (cell 1): 0.429926
#> theta (batch 1): 0.306163
#> betas:    0.9068  -0.1862   0.5441   0.5399   0.7100   0.3955   0.5113   0.3037   0.2481  -0.1658  -0.1786   0.4498
#> 
#> sigma: 0.187684
#> lambda (gene 1): 1.8879
#> epsilon (gene 1): -0.0582843
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 6720 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 760.768
#> delta (gene 1): 0.633495
#> phi (cell 1): 0.770937
#> s (cell 1): 1.50842
#> nu (cell 1): 0.416575
#> theta (batch 1): 0.516764
#> betas:    1.2753  -0.1636   1.1082   0.1102   0.6881   0.4210   0.2242  -0.0583   0.0738   0.1067  -0.4894   0.2325
#> 
#> sigma: 0.18577
#> lambda (gene 1): 1.13558
#> epsilon (gene 1): -0.488686
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 6740 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 836.321
#> delta (gene 1): 0.879561
#> phi (cell 1): 0.834556
#> s (cell 1): 0.639948
#> nu (cell 1): 0.41247
#> theta (batch 1): 0.191959
#> betas:    0.9732  -0.2164   0.1348   0.9081   1.0119   0.5785   0.1635   0.4903   0.0276   0.0054   0.3241  -0.3172
#> 
#> sigma: 0.239409
#> lambda (gene 1): 1.34073
#> epsilon (gene 1): 0.0496316
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 6760 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 603.441
#> delta (gene 1): 0.671117
#> phi (cell 1): 0.871841
#> s (cell 1): 0.45518
#> nu (cell 1): 0.416517
#> theta (batch 1): 0.497726
#> betas:    0.6994  -0.1523   0.4875   1.1644   0.3736   1.1527   0.1208   0.1530   0.7552  -0.5594   0.0067   0.0249
#> 
#> sigma: 0.187705
#> lambda (gene 1): 2.95868
#> epsilon (gene 1): -0.0699974
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 6780 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 799.816
#> delta (gene 1): 0.810702
#> phi (cell 1): 0.873138
#> s (cell 1): 0.637573
#> nu (cell 1): 0.424301
#> theta (batch 1): 0.165798
#> betas:    0.8581   0.0147   0.6847   0.5681   0.5893   0.3088   0.4425  -0.2015  -0.5173   0.2819  -1.3815  -0.4037
#> 
#> sigma: 0.178993
#> lambda (gene 1): 1.76744
#> epsilon (gene 1): 0.0871319
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 6800 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 592.784
#> delta (gene 1): 0.879866
#> phi (cell 1): 0.871744
#> s (cell 1): 0.889182
#> nu (cell 1): 0.40386
#> theta (batch 1): 0.446217
#> betas:    0.8997  -0.1959   0.1637   1.1872   0.7486   0.6039   0.5109   0.5315  -0.2591   0.3721   0.0959  -0.1848
#> 
#> sigma: 0.160677
#> lambda (gene 1): 2.13234
#> epsilon (gene 1): -0.0774873
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 6820 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 636.007
#> delta (gene 1): 0.649897
#> phi (cell 1): 0.802849
#> s (cell 1): 0.512102
#> nu (cell 1): 0.407199
#> theta (batch 1): 0.27542
#> betas:    0.5018  -0.1462   0.8445   1.1335   0.8462   0.8069  -0.0036   0.6852   0.0515   0.1573   0.2006  -0.5178
#> 
#> sigma: 0.236552
#> lambda (gene 1): 2.32402
#> epsilon (gene 1): -0.298649
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 6840 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 671.407
#> delta (gene 1): 0.893216
#> phi (cell 1): 0.899896
#> s (cell 1): 0.821172
#> nu (cell 1): 0.409304
#> theta (batch 1): 0.316368
#> betas:    0.8636  -0.0349   0.3235   0.6719   0.4868   0.6389   0.1127   0.0939  -0.0292  -0.4914  -0.0622  -0.9221
#> 
#> sigma: 0.155888
#> lambda (gene 1): 0.90922
#> epsilon (gene 1): 0.0546672
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 6860 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 604.499
#> delta (gene 1): 0.825471
#> phi (cell 1): 0.821328
#> s (cell 1): 0.239456
#> nu (cell 1): 0.418209
#> theta (batch 1): 0.0641371
#> betas:    0.8993   0.0488   0.3329   1.0710   0.2139   0.3666   0.1630  -0.4185   0.2406  -0.5868  -1.0646  -0.2695
#> 
#> sigma: 0.129058
#> lambda (gene 1): 0.967389
#> epsilon (gene 1): -0.0158922
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 6880 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 590.212
#> delta (gene 1): 0.533659
#> phi (cell 1): 0.884484
#> s (cell 1): 0.412331
#> nu (cell 1): 0.429483
#> theta (batch 1): 0.219873
#> betas:    0.5541  -0.0357   0.9370   0.7208   0.7421   0.8524   0.1707  -0.0307   0.1243  -0.0071  -0.3390  -0.4877
#> 
#> sigma: 0.164552
#> lambda (gene 1): 0.195522
#> epsilon (gene 1): -0.618954
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 6900 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 651.087
#> delta (gene 1): 0.612864
#> phi (cell 1): 0.90902
#> s (cell 1): 0.629338
#> nu (cell 1): 0.433216
#> theta (batch 1): 0.149725
#> betas:    0.1673  -0.0903   0.7686   1.5426   0.6581   0.7577   0.4849   0.4678   0.5798  -0.6788   0.5226  -0.0583
#> 
#> sigma: 0.193244
#> lambda (gene 1): 1.22012
#> epsilon (gene 1): -0.25577
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 6920 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 623.818
#> delta (gene 1): 0.6083
#> phi (cell 1): 0.894677
#> s (cell 1): 0.631236
#> nu (cell 1): 0.424556
#> theta (batch 1): 0.255964
#> betas:   -0.1136   0.0391   0.4420   0.9829   1.3901   0.5816   0.3567   0.3450   0.2233  -0.2040  -0.4777  -0.2148
#> 
#> sigma: 0.177949
#> lambda (gene 1): 1.95058
#> epsilon (gene 1): -0.245315
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 6940 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 814.194
#> delta (gene 1): 0.950134
#> phi (cell 1): 0.893357
#> s (cell 1): 0.411987
#> nu (cell 1): 0.433113
#> theta (batch 1): 0.429654
#> betas:    1.2666  -0.1693   0.1919   0.2909   0.9253   0.3977   0.5216  -0.2073   0.4298  -0.3491  -0.3209  -0.1846
#> 
#> sigma: 0.173139
#> lambda (gene 1): 0.859245
#> epsilon (gene 1): 0.200423
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 6960 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 699.954
#> delta (gene 1): 1.07382
#> phi (cell 1): 0.945116
#> s (cell 1): 0.684795
#> nu (cell 1): 0.420329
#> theta (batch 1): 0.343157
#> betas:    0.5455  -0.0572   0.5397   0.7499   0.6648   0.9517   0.4814  -0.2667   0.2530  -0.3527   0.1967  -0.6923
#> 
#> sigma: 0.177507
#> lambda (gene 1): 0.908049
#> epsilon (gene 1): 0.182092
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 6980 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 876.881
#> delta (gene 1): 0.693142
#> phi (cell 1): 0.809105
#> s (cell 1): 0.492571
#> nu (cell 1): 0.43225
#> theta (batch 1): 0.0980936
#> betas:    0.5393  -0.1282   0.3249   0.9011   1.1775   0.3245   0.7321   0.2682   0.0917  -0.0888   0.0402   0.0226
#> 
#> sigma: 0.213255
#> lambda (gene 1): 1.27204
#> epsilon (gene 1): -0.143627
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 7000 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 705.784
#> delta (gene 1): 0.743656
#> phi (cell 1): 0.786968
#> s (cell 1): 0.418177
#> nu (cell 1): 0.421419
#> theta (batch 1): 0.221335
#> betas:    1.0641  -0.2064   1.0213   0.3854   0.7892   0.5625   0.2633   0.5695   0.0843  -0.1808   0.1867  -0.3116
#> 
#> sigma: 0.182815
#> lambda (gene 1): 0.28821
#> epsilon (gene 1): -0.0438864
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 7020 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 845.025
#> delta (gene 1): 0.921039
#> phi (cell 1): 0.702054
#> s (cell 1): 0.316669
#> nu (cell 1): 0.416509
#> theta (batch 1): 0.220284
#> betas:    1.2407  -0.2570   0.4831   0.6402   0.6126   0.5554   0.6291  -0.0693   0.6241  -0.2704  -0.1496   0.5193
#> 
#> sigma: 0.159976
#> lambda (gene 1): 1.49437
#> epsilon (gene 1): 0.205246
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 7040 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 684.656
#> delta (gene 1): 0.978548
#> phi (cell 1): 0.811522
#> s (cell 1): 0.490377
#> nu (cell 1): 0.42519
#> theta (batch 1): 0.312248
#> betas:    0.8523  -0.0557   0.5465   0.9914   0.7109   0.0694   0.5916  -0.1101  -0.1657  -0.1365  -0.4386  -0.1753
#> 
#> sigma: 0.151128
#> lambda (gene 1): 0.950802
#> epsilon (gene 1): 0.128302
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 7060 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 981.468
#> delta (gene 1): 0.660412
#> phi (cell 1): 0.862766
#> s (cell 1): 0.422613
#> nu (cell 1): 0.423217
#> theta (batch 1): 0.0122239
#> betas:    0.8538   0.0547   0.0837   0.5486   0.7984   0.6088  -0.2137  -0.0408  -0.0300  -0.8398  -0.5636  -0.7784
#> 
#> sigma: 0.194166
#> lambda (gene 1): 0.527181
#> epsilon (gene 1): -0.106506
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 7080 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 856.213
#> delta (gene 1): 1.01921
#> phi (cell 1): 0.691317
#> s (cell 1): 0.40065
#> nu (cell 1): 0.434845
#> theta (batch 1): 0.0125897
#> betas:    0.9062  -0.0411   0.8795   0.4499   0.3424   0.6134   0.3052  -0.1147  -0.0872  -0.2959  -0.2122  -0.6612
#> 
#> sigma: 0.161443
#> lambda (gene 1): 1.02571
#> epsilon (gene 1): 0.104051
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 7100 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 619.709
#> delta (gene 1): 0.804437
#> phi (cell 1): 0.75578
#> s (cell 1): 0.390004
#> nu (cell 1): 0.416778
#> theta (batch 1): 0.00300712
#> betas:    1.2799  -0.0979   0.3101   0.9050   0.7315  -0.0508   0.5894  -0.1019   0.0128  -0.5111  -0.0887  -0.7375
#> 
#> sigma: 0.141411
#> lambda (gene 1): 0.881682
#> epsilon (gene 1): -0.0617403
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 7120 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 778.815
#> delta (gene 1): 0.575211
#> phi (cell 1): 0.743637
#> s (cell 1): 0.455719
#> nu (cell 1): 0.412926
#> theta (batch 1): 0.010494
#> betas:    0.9876  -0.0774   0.7924   1.2015   0.1917   0.5508   0.2120   0.0518  -0.0510  -0.4481  -0.1764  -0.5021
#> 
#> sigma: 0.158671
#> lambda (gene 1): 1.45089
#> epsilon (gene 1): -0.285478
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 7140 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 656.659
#> delta (gene 1): 0.664049
#> phi (cell 1): 0.713279
#> s (cell 1): 0.459788
#> nu (cell 1): 0.416757
#> theta (batch 1): 0.0210308
#> betas:    0.9527  -0.0861   0.9753   0.9897  -0.4279   0.9956   0.2120   0.1648   0.0467   0.0332  -0.9106   0.3857
#> 
#> sigma: 0.148021
#> lambda (gene 1): 0.375604
#> epsilon (gene 1): -0.315319
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 7160 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 652.603
#> delta (gene 1): 0.665955
#> phi (cell 1): 0.75656
#> s (cell 1): 0.622682
#> nu (cell 1): 0.440219
#> theta (batch 1): 0.0670853
#> betas:    0.4842  -0.0423   1.1572   0.2631   1.0726   0.3357   0.5208   0.2355  -0.1759  -0.1669  -0.2575  -0.1556
#> 
#> sigma: 0.159788
#> lambda (gene 1): 0.733498
#> epsilon (gene 1): -0.156013
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 7180 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 723.476
#> delta (gene 1): 0.803566
#> phi (cell 1): 0.793329
#> s (cell 1): 0.873548
#> nu (cell 1): 0.415808
#> theta (batch 1): 0.186033
#> betas:    0.9893  -0.0451   0.4075   0.5839   0.7071   0.2143   0.4907  -0.4983   0.3261  -0.5318  -0.7499  -0.2058
#> 
#> sigma: 0.152074
#> lambda (gene 1): 2.12437
#> epsilon (gene 1): 0.129783
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 7200 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 849.964
#> delta (gene 1): 0.681812
#> phi (cell 1): 0.689664
#> s (cell 1): 1.09233
#> nu (cell 1): 0.435632
#> theta (batch 1): 0.310191
#> betas:    0.4785  -0.0326   0.5299   1.0791   0.7228   0.9770  -0.5126   0.9763  -0.2128  -0.4697   0.0446  -0.3416
#> 
#> sigma: 0.201573
#> lambda (gene 1): 1.12493
#> epsilon (gene 1): -0.16482
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 7220 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 615.531
#> delta (gene 1): 0.728051
#> phi (cell 1): 0.727999
#> s (cell 1): 0.363214
#> nu (cell 1): 0.426431
#> theta (batch 1): 0.117728
#> betas:    0.8484  -0.0294   0.3709   0.9342   0.3806   0.4126   0.7905  -0.3077  -0.1388  -0.0777  -0.6338  -0.4122
#> 
#> sigma: 0.195984
#> lambda (gene 1): 1.26372
#> epsilon (gene 1): -0.162389
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 7240 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 604.291
#> delta (gene 1): 0.619398
#> phi (cell 1): 0.771269
#> s (cell 1): 0.237755
#> nu (cell 1): 0.427616
#> theta (batch 1): 0.204964
#> betas:    1.4960  -0.1701   0.9921   0.6543   0.5660   0.2406   0.4454  -0.2147   0.2368  -0.4352  -0.5777   0.2898
#> 
#> sigma: 0.184616
#> lambda (gene 1): 1.51069
#> epsilon (gene 1): -0.178465
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 7260 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 666.26
#> delta (gene 1): 0.668427
#> phi (cell 1): 0.712249
#> s (cell 1): 0.574482
#> nu (cell 1): 0.429321
#> theta (batch 1): 0.385703
#> betas:    1.2097  -0.2017   0.8234   0.9452   0.5648   0.3109   0.7425   0.0673  -0.1734   0.2178  -0.2242  -0.0387
#> 
#> sigma: 0.194398
#> lambda (gene 1): 0.371528
#> epsilon (gene 1): -0.233061
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 7280 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 614.665
#> delta (gene 1): 0.521085
#> phi (cell 1): 0.699751
#> s (cell 1): 0.58705
#> nu (cell 1): 0.426601
#> theta (batch 1): 0.3711
#> betas:    0.7705  -0.0165   0.5073   0.9079   0.7190   0.0648   0.5920   0.2784  -0.6166   0.0793  -0.7192  -0.4674
#> 
#> sigma: 0.116885
#> lambda (gene 1): 2.20013
#> epsilon (gene 1): -0.385982
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 7300 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 644.217
#> delta (gene 1): 0.616633
#> phi (cell 1): 0.732593
#> s (cell 1): 0.904392
#> nu (cell 1): 0.411641
#> theta (batch 1): 0.267206
#> betas:    0.8095  -0.0190   0.3352   1.2458   0.5563   0.4701   0.5727  -0.5525   0.3828  -0.4669  -0.7255  -0.3131
#> 
#> sigma: 0.144248
#> lambda (gene 1): 2.70201
#> epsilon (gene 1): -0.210027
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 7320 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 822.702
#> delta (gene 1): 0.621613
#> phi (cell 1): 0.765394
#> s (cell 1): 0.712158
#> nu (cell 1): 0.429369
#> theta (batch 1): 0.281712
#> betas:    0.5935  -0.0760   0.6720   0.5528   0.4629   1.0300   0.5044  -0.3688   0.6254   0.0108  -0.8653   0.1694
#> 
#> sigma: 0.116379
#> lambda (gene 1): 1.14618
#> epsilon (gene 1): -0.311774
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 7340 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 779.077
#> delta (gene 1): 0.848817
#> phi (cell 1): 0.720222
#> s (cell 1): 0.389959
#> nu (cell 1): 0.42311
#> theta (batch 1): 0.187951
#> betas:    1.2230  -0.0814   0.4177   0.4219   0.7083   0.4081   0.0789   0.2134  -0.4514  -0.3255  -0.2975  -0.3024
#> 
#> sigma: 0.176483
#> lambda (gene 1): 2.91321
#> epsilon (gene 1): 0.037537
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 7360 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 830.088
#> delta (gene 1): 0.859725
#> phi (cell 1): 0.711953
#> s (cell 1): 1.00637
#> nu (cell 1): 0.435956
#> theta (batch 1): 0.247433
#> betas:    0.8637  -0.1432   0.9070   0.1500   1.0921   0.6234   0.3432   0.1381   0.1805   0.1394  -0.6779   0.2316
#> 
#> sigma: 0.140731
#> lambda (gene 1): 0.826931
#> epsilon (gene 1): 0.0887455
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 7380 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 690.868
#> delta (gene 1): 0.935902
#> phi (cell 1): 0.65033
#> s (cell 1): 0.722295
#> nu (cell 1): 0.423406
#> theta (batch 1): 0.376187
#> betas:    1.2262  -0.0841   0.4401   0.3892   0.5692   0.6687   0.2341  -0.1556  -0.0683  -0.3626  -0.4277  -0.4311
#> 
#> sigma: 0.109784
#> lambda (gene 1): 1.69336
#> epsilon (gene 1): 0.147166
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 7400 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 667.998
#> delta (gene 1): 0.709578
#> phi (cell 1): 0.730601
#> s (cell 1): 0.842142
#> nu (cell 1): 0.422413
#> theta (batch 1): 0.144403
#> betas:    1.1579  -0.1282   0.6812   0.4833   0.6820   0.5179  -0.1191   0.5929  -0.4524   0.0793  -0.3848  -0.5289
#> 
#> sigma: 0.186683
#> lambda (gene 1): 0.303599
#> epsilon (gene 1): -0.1082
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 7420 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 668.99
#> delta (gene 1): 0.593094
#> phi (cell 1): 0.653739
#> s (cell 1): 0.435488
#> nu (cell 1): 0.415217
#> theta (batch 1): 0.141933
#> betas:    0.4873  -0.0635   1.5765   0.2485   1.1271   0.7992  -0.0763   0.6396  -0.1549   0.0140  -0.3141  -0.0949
#> 
#> sigma: 0.161833
#> lambda (gene 1): 0.553376
#> epsilon (gene 1): -0.368284
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 7440 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 763.062
#> delta (gene 1): 0.643809
#> phi (cell 1): 0.707309
#> s (cell 1): 1.05886
#> nu (cell 1): 0.405776
#> theta (batch 1): 0.231292
#> betas:    1.1195  -0.1290   1.2394   0.6532  -0.0664   0.8623   0.2488  -0.0017   0.1277  -0.3754   0.0357  -0.6906
#> 
#> sigma: 0.136749
#> lambda (gene 1): 1.19926
#> epsilon (gene 1): -0.247131
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 7460 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 666.879
#> delta (gene 1): 0.539943
#> phi (cell 1): 0.717662
#> s (cell 1): 0.536781
#> nu (cell 1): 0.420319
#> theta (batch 1): 0.0494653
#> betas:    0.8704  -0.1309   0.6383   0.4486   0.8497   0.4747   0.2806   0.1847   0.0891  -0.1729  -0.0560  -0.3162
#> 
#> sigma: 0.132282
#> lambda (gene 1): 1.01417
#> epsilon (gene 1): -0.416713
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 7480 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 668.865
#> delta (gene 1): 0.834737
#> phi (cell 1): 0.647504
#> s (cell 1): 0.396402
#> nu (cell 1): 0.418941
#> theta (batch 1): 0.0700117
#> betas:    1.3776  -0.0800   0.8736   0.6142  -0.0908   0.9009   0.0868  -0.2659  -0.0625  -0.5111  -0.6666  -0.2102
#> 
#> sigma: 0.183011
#> lambda (gene 1): 0.831292
#> epsilon (gene 1): 0.143387
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 7500 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 807.644
#> delta (gene 1): 0.706177
#> phi (cell 1): 0.710551
#> s (cell 1): 0.60955
#> nu (cell 1): 0.424119
#> theta (batch 1): 0.0553022
#> betas:    0.5295  -0.0003   0.4127   1.4432   0.2219   0.5823   0.1127   0.3271   0.1281  -0.6801  -0.5209  -0.0311
#> 
#> sigma: 0.169263
#> lambda (gene 1): 1.93498
#> epsilon (gene 1): 0.0501788
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 7520 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 572.395
#> delta (gene 1): 0.632648
#> phi (cell 1): 0.715162
#> s (cell 1): 0.425128
#> nu (cell 1): 0.427026
#> theta (batch 1): 0.157347
#> betas:    0.8674  -0.1436   0.7785   0.9374   0.6255   0.1266   0.7723   0.4981  -0.0915  -0.2899  -0.0486   0.0036
#> 
#> sigma: 0.117005
#> lambda (gene 1): 0.78466
#> epsilon (gene 1): -0.118148
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 7540 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 597.595
#> delta (gene 1): 0.463964
#> phi (cell 1): 0.663353
#> s (cell 1): 1.61622
#> nu (cell 1): 0.418714
#> theta (batch 1): 0.189191
#> betas:    0.7737  -0.1284   0.6421   1.2309   0.5024   0.3833   0.6336   0.0730   0.1922  -0.3580  -0.0917  -0.0650
#> 
#> sigma: 0.164267
#> lambda (gene 1): 0.0692452
#> epsilon (gene 1): -0.405325
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 7560 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 711.54
#> delta (gene 1): 0.670173
#> phi (cell 1): 0.655755
#> s (cell 1): 1.31482
#> nu (cell 1): 0.422713
#> theta (batch 1): 0.764317
#> betas:    1.2412  -0.1886   0.5387   0.8630   0.3004   0.4836   0.6303  -0.2547   0.5921  -0.6681   0.0360  -0.1082
#> 
#> sigma: 0.141832
#> lambda (gene 1): 1.85425
#> epsilon (gene 1): -0.0706517
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 7580 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 622.498
#> delta (gene 1): 0.471971
#> phi (cell 1): 0.650427
#> s (cell 1): 0.29228
#> nu (cell 1): 0.43126
#> theta (batch 1): 0.221446
#> betas:    0.7665  -0.1223   0.5051   0.9441   0.6529   0.2129   0.9109   0.1163   0.2969  -0.6142  -0.3563   0.5968
#> 
#> sigma: 0.203345
#> lambda (gene 1): 1.97518
#> epsilon (gene 1): -0.243721
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 7600 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 737.943
#> delta (gene 1): 0.729999
#> phi (cell 1): 0.730351
#> s (cell 1): 0.410059
#> nu (cell 1): 0.422474
#> theta (batch 1): 0.163059
#> betas:    0.2500   0.0051   1.1841   0.5425   0.8636   1.0525   0.0055   0.2301   0.2146  -0.4677  -0.0929  -0.4596
#> 
#> sigma: 0.178472
#> lambda (gene 1): 1.42771
#> epsilon (gene 1): -0.11915
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 7620 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 658.276
#> delta (gene 1): 0.689068
#> phi (cell 1): 0.748042
#> s (cell 1): 0.40056
#> nu (cell 1): 0.414179
#> theta (batch 1): 0.399834
#> betas:    1.1352  -0.0888   0.4688   0.8362   0.5855   0.4336   0.0826  -0.0238   0.0548  -0.3276  -0.3904  -0.5091
#> 
#> sigma: 0.138406
#> lambda (gene 1): 1.73694
#> epsilon (gene 1): -0.179254
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 7640 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 836.904
#> delta (gene 1): 0.716496
#> phi (cell 1): 0.692299
#> s (cell 1): 0.561857
#> nu (cell 1): 0.433085
#> theta (batch 1): 0.273044
#> betas:    1.0818  -0.0989   0.8898   0.3655   0.7119   0.4581   0.1539   0.2294  -0.1627  -0.2700  -0.4085  -0.2170
#> 
#> sigma: 0.138179
#> lambda (gene 1): 1.60066
#> epsilon (gene 1): -0.0628661
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 7660 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 684.119
#> delta (gene 1): 0.441274
#> phi (cell 1): 0.715171
#> s (cell 1): 0.429972
#> nu (cell 1): 0.42074
#> theta (batch 1): 0.378796
#> betas:    0.5105  -0.0488   1.2751   0.3383   0.8258   0.7039   0.6210   0.0050  -0.1224   0.1074  -0.6530  -0.2950
#> 
#> sigma: 0.205127
#> lambda (gene 1): 0.185945
#> epsilon (gene 1): -0.472015
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 7680 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 692.805
#> delta (gene 1): 0.912277
#> phi (cell 1): 0.660895
#> s (cell 1): 0.544956
#> nu (cell 1): 0.435159
#> theta (batch 1): 0.131464
#> betas:    0.5176   0.0366   0.6708   0.8233   0.7586   0.4666  -0.0681   0.2516   0.0410  -0.4542  -0.6741  -0.4213
#> 
#> sigma: 0.139179
#> lambda (gene 1): 0.55585
#> epsilon (gene 1): 0.157103
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 7700 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 760.681
#> delta (gene 1): 0.658306
#> phi (cell 1): 0.701036
#> s (cell 1): 0.550356
#> nu (cell 1): 0.427186
#> theta (batch 1): 0.0832256
#> betas:    1.2807  -0.1923   0.6859   0.7306   0.3512   0.5087   0.6415  -0.2038   0.1914  -0.1991  -0.0735  -0.2876
#> 
#> sigma: 0.190468
#> lambda (gene 1): 0.841005
#> epsilon (gene 1): -0.185783
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 7720 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 638.333
#> delta (gene 1): 0.893873
#> phi (cell 1): 0.634948
#> s (cell 1): 0.690865
#> nu (cell 1): 0.413727
#> theta (batch 1): 0.136353
#> betas:    0.4973  -0.0686   0.2318   1.0820   0.7130   0.7353   0.3433   0.1130   0.0897   0.1488  -0.6558   0.1007
#> 
#> sigma: 0.178659
#> lambda (gene 1): 0.830847
#> epsilon (gene 1): 0.073822
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 7740 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 645.973
#> delta (gene 1): 0.814532
#> phi (cell 1): 0.693124
#> s (cell 1): 0.237949
#> nu (cell 1): 0.436831
#> theta (batch 1): 0.167058
#> betas:    0.5373   0.0254   0.6932   1.0884   0.5677   0.4576   0.3522   0.0864  -0.1987  -0.2917  -0.8096  -0.0106
#> 
#> sigma: 0.131488
#> lambda (gene 1): 0.807971
#> epsilon (gene 1): 0.0966618
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 7760 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 553.89
#> delta (gene 1): 0.715188
#> phi (cell 1): 0.714831
#> s (cell 1): 0.514264
#> nu (cell 1): 0.417924
#> theta (batch 1): 0.0464578
#> betas:    1.2355  -0.2645   0.8825   0.3972   0.7045   0.1342   1.1684  -0.1082   0.0995   0.0494   0.2541   0.1387
#> 
#> sigma: 0.159969
#> lambda (gene 1): 0.995701
#> epsilon (gene 1): -0.176508
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 7780 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 641.843
#> delta (gene 1): 0.504669
#> phi (cell 1): 0.64875
#> s (cell 1): 0.426145
#> nu (cell 1): 0.430297
#> theta (batch 1): 0.186613
#> betas:    1.1821  -0.1383   0.3356   0.4718   0.7589   0.3893   0.1140   0.0903  -0.0205  -0.0121  -0.5091   0.0369
#> 
#> sigma: 0.165967
#> lambda (gene 1): 0.206109
#> epsilon (gene 1): -0.567145
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 7800 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 748.45
#> delta (gene 1): 0.900544
#> phi (cell 1): 0.689884
#> s (cell 1): 0.862938
#> nu (cell 1): 0.426112
#> theta (batch 1): 0.335555
#> betas:    0.4850  -0.0127   1.1010   0.5352   1.1610   0.1449   0.1904   0.6487  -0.2882  -0.2038  -0.6528   0.0117
#> 
#> sigma: 0.139823
#> lambda (gene 1): 1.5005
#> epsilon (gene 1): 0.235252
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 7820 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 609.922
#> delta (gene 1): 0.594388
#> phi (cell 1): 0.670334
#> s (cell 1): 0.355219
#> nu (cell 1): 0.421918
#> theta (batch 1): 0.179532
#> betas:    0.6876  -0.1984   1.2005   0.5649   1.0994   0.6785   0.5718   0.5038  -0.0200   0.1808   0.2198   0.2026
#> 
#> sigma: 0.159074
#> lambda (gene 1): 0.667209
#> epsilon (gene 1): -0.409474
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 7840 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 745.491
#> delta (gene 1): 1.00398
#> phi (cell 1): 0.722907
#> s (cell 1): 0.612503
#> nu (cell 1): 0.421992
#> theta (batch 1): 0.216989
#> betas:    0.7132  -0.0789   0.6323   0.4663   1.0163   0.3295   0.4664   0.0228  -0.2161   0.2659  -0.6912   0.1299
#> 
#> sigma: 0.13544
#> lambda (gene 1): 1.72925
#> epsilon (gene 1): 0.158802
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 7860 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 666.442
#> delta (gene 1): 0.510681
#> phi (cell 1): 0.68988
#> s (cell 1): 1.98756
#> nu (cell 1): 0.428771
#> theta (batch 1): 0.234197
#> betas:    0.3893  -0.0131   1.0035   0.6815   0.7951   0.6337   0.5253  -0.0815   0.4892  -0.3104  -0.9100   0.5868
#> 
#> sigma: 0.194759
#> lambda (gene 1): 0.962071
#> epsilon (gene 1): -0.462308
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 7880 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 753.045
#> delta (gene 1): 0.705194
#> phi (cell 1): 0.644058
#> s (cell 1): 0.861383
#> nu (cell 1): 0.424977
#> theta (batch 1): 0.2794
#> betas:    0.9545  -0.0269   0.0287   1.2091   0.0023   0.7389   0.2935  -0.1468   0.1614  -0.4045  -0.7145  -0.3300
#> 
#> sigma: 0.156205
#> lambda (gene 1): 1.99828
#> epsilon (gene 1): -0.166803
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 7900 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 746.484
#> delta (gene 1): 0.603808
#> phi (cell 1): 0.662929
#> s (cell 1): 1.4037
#> nu (cell 1): 0.421217
#> theta (batch 1): 0.424729
#> betas:    0.7464  -0.0722   1.0074   0.4192   0.6383   0.4117   0.5609   0.0396   0.0854  -0.2184  -0.3980  -0.3210
#> 
#> sigma: 0.12683
#> lambda (gene 1): 0.478327
#> epsilon (gene 1): -0.240226
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 7920 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 746.421
#> delta (gene 1): 0.721223
#> phi (cell 1): 0.676942
#> s (cell 1): 0.529007
#> nu (cell 1): 0.412012
#> theta (batch 1): 0.237775
#> betas:    0.5988  -0.0369   1.3729   0.4077   0.7579   0.5909   0.1195   0.4286  -0.1902  -0.3988  -0.3169  -0.3454
#> 
#> sigma: 0.15326
#> lambda (gene 1): 1.49284
#> epsilon (gene 1): 0.0862169
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 7940 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 808.449
#> delta (gene 1): 0.502027
#> phi (cell 1): 0.730196
#> s (cell 1): 0.539999
#> nu (cell 1): 0.423761
#> theta (batch 1): 0.242813
#> betas:    0.8129   0.0653   0.5551   0.7691   0.3397   0.9114  -0.1498  -0.0425  -0.2669  -0.5361  -0.9276  -0.7877
#> 
#> sigma: 0.17992
#> lambda (gene 1): 0.549877
#> epsilon (gene 1): -0.28112
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 7960 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 699.207
#> delta (gene 1): 0.708572
#> phi (cell 1): 0.643928
#> s (cell 1): 1.2425
#> nu (cell 1): 0.403668
#> theta (batch 1): 0.584735
#> betas:    0.8590   0.0559   1.1200   0.8472  -0.1274   0.7368   0.2086  -0.4915   0.1740  -0.7028  -0.4606  -1.0154
#> 
#> sigma: 0.224414
#> lambda (gene 1): 1.27753
#> epsilon (gene 1): -0.246907
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 7980 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 595.062
#> delta (gene 1): 0.845787
#> phi (cell 1): 0.658392
#> s (cell 1): 0.604752
#> nu (cell 1): 0.437569
#> theta (batch 1): 0.246851
#> betas:    1.0413  -0.0943   0.7209   0.6720   0.7047   0.5453   0.1107  -0.0715   0.3953  -0.4621  -0.3118  -0.2402
#> 
#> sigma: 0.188368
#> lambda (gene 1): 2.90339
#> epsilon (gene 1): -0.0601985
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 8000 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 513.696
#> delta (gene 1): 0.58776
#> phi (cell 1): 0.717253
#> s (cell 1): 0.328537
#> nu (cell 1): 0.425486
#> theta (batch 1): 0.116087
#> betas:    0.8199  -0.0816   0.0190   0.3496   1.3431   0.2883   0.4034   0.1095   0.0353  -0.1516  -0.7620   0.1773
#> 
#> sigma: 0.162838
#> lambda (gene 1): 1.23373
#> epsilon (gene 1): -0.189134
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 8020 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 862.24
#> delta (gene 1): 0.698942
#> phi (cell 1): 0.809396
#> s (cell 1): 0.499746
#> nu (cell 1): 0.422248
#> theta (batch 1): 0.0877749
#> betas:    1.3662  -0.0937   0.4777   0.4389   0.3602   0.1730   0.5032  -0.1384   0.0871  -0.8962  -0.1643  -0.4112
#> 
#> sigma: 0.174173
#> lambda (gene 1): 0.554288
#> epsilon (gene 1): -0.00896677
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 8040 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 592.18
#> delta (gene 1): 0.843854
#> phi (cell 1): 0.78388
#> s (cell 1): 0.594463
#> nu (cell 1): 0.411974
#> theta (batch 1): 0.048502
#> betas:    0.7153  -0.1427   0.7127   1.2431   0.1832   0.9878   0.2757   0.2919   0.2898  -0.2124  -0.3211   0.4472
#> 
#> sigma: 0.143343
#> lambda (gene 1): 0.680102
#> epsilon (gene 1): 0.128193
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 8060 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 671.171
#> delta (gene 1): 0.76713
#> phi (cell 1): 0.770213
#> s (cell 1): 0.543615
#> nu (cell 1): 0.413407
#> theta (batch 1): 0.0182874
#> betas:    0.4279   0.0022   0.6689   1.3170   0.5862   0.5542   0.5018  -0.4599   0.3972  -0.2904  -0.4901  -0.3995
#> 
#> sigma: 0.160261
#> lambda (gene 1): 0.615588
#> epsilon (gene 1): -0.107975
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 8080 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 805.65
#> delta (gene 1): 0.708989
#> phi (cell 1): 0.758449
#> s (cell 1): 0.45549
#> nu (cell 1): 0.426727
#> theta (batch 1): 0.0120523
#> betas:    0.8455  -0.1170   0.2799   1.2899   0.6068   0.3604   0.4038   0.2934  -0.1200   0.1448  -0.3965  -0.2841
#> 
#> sigma: 0.15911
#> lambda (gene 1): 0.257447
#> epsilon (gene 1): -0.168623
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 8100 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 543.339
#> delta (gene 1): 0.78058
#> phi (cell 1): 0.831059
#> s (cell 1): 0.357039
#> nu (cell 1): 0.404272
#> theta (batch 1): 0.00843239
#> betas:    1.2816  -0.3449   0.6906   0.4891   0.4292   0.9508   0.3117   0.4767   0.4312   0.2139  -0.0849   0.7498
#> 
#> sigma: 0.246117
#> lambda (gene 1): 1.10819
#> epsilon (gene 1): 0.00531342
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 8120 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 569.974
#> delta (gene 1): 0.595091
#> phi (cell 1): 0.786537
#> s (cell 1): 0.326556
#> nu (cell 1): 0.408464
#> theta (batch 1): 0.0395067
#> betas:    0.5384  -0.1036   0.8286   0.5720   0.7949   1.2426  -0.1475   0.4974   0.4762  -0.3961   0.0115   0.1513
#> 
#> sigma: 0.182659
#> lambda (gene 1): 0.581209
#> epsilon (gene 1): -0.43936
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 8140 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 489.998
#> delta (gene 1): 0.507742
#> phi (cell 1): 0.734602
#> s (cell 1): 0.348255
#> nu (cell 1): 0.418523
#> theta (batch 1): 0.0901981
#> betas:    1.7603  -0.2000   0.6675   0.4454   0.3168   0.7174  -0.0183  -0.1089   0.0042  -0.0719  -0.5885  -0.2198
#> 
#> sigma: 0.189205
#> lambda (gene 1): 0.974773
#> epsilon (gene 1): -0.504033
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 8160 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 735.52
#> delta (gene 1): 0.784457
#> phi (cell 1): 0.727775
#> s (cell 1): 0.463587
#> nu (cell 1): 0.420113
#> theta (batch 1): 0.0192497
#> betas:    0.6822   0.0308   0.5109   1.3149   0.1476   0.5643   0.3786  -0.3147   0.1149  -0.2650  -0.9581  -0.6724
#> 
#> sigma: 0.152518
#> lambda (gene 1): 2.98883
#> epsilon (gene 1): 0.0383106
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 8180 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 880.937
#> delta (gene 1): 0.798565
#> phi (cell 1): 0.71104
#> s (cell 1): 0.402462
#> nu (cell 1): 0.427599
#> theta (batch 1): 0.0999073
#> betas:    1.1494  -0.1171   0.2202   0.7682   0.4975   0.6929   0.0046  -0.1452   0.2552  -0.2002  -0.5831  -0.1756
#> 
#> sigma: 0.145224
#> lambda (gene 1): 0.200675
#> epsilon (gene 1): -0.0371061
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 8200 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 630.521
#> delta (gene 1): 1.08596
#> phi (cell 1): 0.681184
#> s (cell 1): 0.579939
#> nu (cell 1): 0.427663
#> theta (batch 1): 0.105184
#> betas:    1.0535  -0.0627   0.0665   0.5565   0.9043   0.2548   0.2803   0.2886  -0.3745  -0.2464  -0.3347  -0.6625
#> 
#> sigma: 0.151932
#> lambda (gene 1): 0.8932
#> epsilon (gene 1): 0.311751
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 8220 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 632.556
#> delta (gene 1): 1.35824
#> phi (cell 1): 0.704017
#> s (cell 1): 0.501226
#> nu (cell 1): 0.406323
#> theta (batch 1): 0.202572
#> betas:    0.6560  -0.2179   0.8584   0.5151   1.1900   0.4304   0.7397   0.1614   0.6379  -0.3200   0.7138   0.1765
#> 
#> sigma: 0.177817
#> lambda (gene 1): 1.08056
#> epsilon (gene 1): 0.348463
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 8240 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 672.313
#> delta (gene 1): 0.681549
#> phi (cell 1): 0.808552
#> s (cell 1): 0.303354
#> nu (cell 1): 0.409454
#> theta (batch 1): 0.18844
#> betas:    0.5614  -0.0003   0.7366   0.7495   0.8302   0.4379   0.1017   0.4861  -0.3036  -0.3994  -0.3139  -0.4440
#> 
#> sigma: 0.145026
#> lambda (gene 1): 0.35751
#> epsilon (gene 1): -0.0870837
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 8260 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 648.346
#> delta (gene 1): 0.702525
#> phi (cell 1): 0.825395
#> s (cell 1): 0.812951
#> nu (cell 1): 0.413984
#> theta (batch 1): 0.125541
#> betas:    1.0924  -0.0911   0.6779   0.4663   0.8321   0.2834   0.2752  -0.3034   0.4024  -0.5494  -0.6036   0.2400
#> 
#> sigma: 0.173402
#> lambda (gene 1): 1.76458
#> epsilon (gene 1): -0.109782
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 8280 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 933.2
#> delta (gene 1): 0.742343
#> phi (cell 1): 0.747485
#> s (cell 1): 0.810098
#> nu (cell 1): 0.424872
#> theta (batch 1): 0.38606
#> betas:    0.8528  -0.0535   0.7910   0.6495   0.4321   0.8895  -0.1852   0.1500   0.0062   0.1744  -0.7069  -0.8192
#> 
#> sigma: 0.212346
#> lambda (gene 1): 2.5875
#> epsilon (gene 1): -0.221993
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 8300 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 656.951
#> delta (gene 1): 0.479939
#> phi (cell 1): 0.701553
#> s (cell 1): 0.575484
#> nu (cell 1): 0.422892
#> theta (batch 1): 0.392941
#> betas:    0.6177  -0.0183   0.7141   0.6026   0.0972   1.0949   0.6013  -0.8465   0.8405  -0.4980  -0.5624   0.0312
#> 
#> sigma: 0.174813
#> lambda (gene 1): 0.560279
#> epsilon (gene 1): -0.704555
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 8320 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 585.712
#> delta (gene 1): 0.699617
#> phi (cell 1): 0.74394
#> s (cell 1): 0.366273
#> nu (cell 1): 0.418597
#> theta (batch 1): 0.292723
#> betas:    1.0220  -0.0631   0.3489   0.8985   0.6668   0.5493  -0.2963   0.3733  -0.1264  -0.5767  -0.4853   0.1459
#> 
#> sigma: 0.162488
#> lambda (gene 1): 1.28396
#> epsilon (gene 1): -0.0459709
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 8340 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 690.349
#> delta (gene 1): 0.887549
#> phi (cell 1): 0.737995
#> s (cell 1): 0.224047
#> nu (cell 1): 0.419422
#> theta (batch 1): 0.379469
#> betas:    0.5341   0.0547   0.9808   0.9529   0.2289   0.2508   0.6737  -0.2384  -0.2391   0.1685  -1.2962  -0.3910
#> 
#> sigma: 0.107741
#> lambda (gene 1): 0.942074
#> epsilon (gene 1): 0.0993326
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 8360 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 959.625
#> delta (gene 1): 0.804974
#> phi (cell 1): 0.75037
#> s (cell 1): 0.502867
#> nu (cell 1): 0.415157
#> theta (batch 1): 0.262941
#> betas:    0.8796  -0.1014   0.9774   0.7156   0.3597   0.7828   0.1710   0.1745  -0.1387   0.0985  -0.6637   0.1539
#> 
#> sigma: 0.181592
#> lambda (gene 1): 1.51412
#> epsilon (gene 1): -0.0136238
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 8380 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 814.129
#> delta (gene 1): 0.771077
#> phi (cell 1): 0.769654
#> s (cell 1): 0.339734
#> nu (cell 1): 0.419714
#> theta (batch 1): 0.154792
#> betas:    0.5960  -0.0650   0.5709   1.4584   0.3554   0.9923  -0.0136   0.3327  -0.1260   0.0701  -0.4675  -0.1814
#> 
#> sigma: 0.17572
#> lambda (gene 1): 1.03292
#> epsilon (gene 1): -0.07456
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 8400 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 617.218
#> delta (gene 1): 0.611817
#> phi (cell 1): 0.72524
#> s (cell 1): 0.29149
#> nu (cell 1): 0.427346
#> theta (batch 1): 0.135121
#> betas:    0.5841  -0.0717   0.7019   0.7868   0.9999   0.6961  -0.0727   0.6346   0.0541  -0.5308  -0.1767   0.0754
#> 
#> sigma: 0.123123
#> lambda (gene 1): 0.474629
#> epsilon (gene 1): -0.125591
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 8420 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 1015.57
#> delta (gene 1): 0.562025
#> phi (cell 1): 0.794301
#> s (cell 1): 1.54666
#> nu (cell 1): 0.41891
#> theta (batch 1): 0.317898
#> betas:    1.0852  -0.1862   0.7459   0.8275   0.3435   0.6822   0.4330   0.0835   0.4534  -0.2180  -0.4555   0.5175
#> 
#> sigma: 0.15137
#> lambda (gene 1): 0.541588
#> epsilon (gene 1): -0.337382
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 8440 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 818.735
#> delta (gene 1): 0.754628
#> phi (cell 1): 0.704542
#> s (cell 1): 0.340096
#> nu (cell 1): 0.409821
#> theta (batch 1): 0.401853
#> betas:    0.7626  -0.1939   0.4952   0.6917   0.9105   0.3271   0.8499   0.1586   0.3719   0.3615  -0.3775   0.1995
#> 
#> sigma: 0.228623
#> lambda (gene 1): 0.815189
#> epsilon (gene 1): -0.189191
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 8460 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 603.606
#> delta (gene 1): 0.625864
#> phi (cell 1): 0.786023
#> s (cell 1): 0.256477
#> nu (cell 1): 0.411194
#> theta (batch 1): 0.371645
#> betas:    0.8911  -0.0554   0.9611   0.6166   0.7458   0.0306   0.3542   0.1911  -0.0288  -0.4196  -0.3417   0.0375
#> 
#> sigma: 0.133347
#> lambda (gene 1): 1.59874
#> epsilon (gene 1): -0.357516
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 8480 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 658.416
#> delta (gene 1): 0.708833
#> phi (cell 1): 0.806394
#> s (cell 1): 0.29757
#> nu (cell 1): 0.431215
#> theta (batch 1): 0.330722
#> betas:    0.9051  -0.1492   0.6397   0.3905   0.8040   0.3414   0.7073   0.1077   0.1215  -0.2230   0.2231  -0.5693
#> 
#> sigma: 0.1523
#> lambda (gene 1): 1.9624
#> epsilon (gene 1): -0.165154
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 8500 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 752.342
#> delta (gene 1): 0.768548
#> phi (cell 1): 0.733668
#> s (cell 1): 0.844894
#> nu (cell 1): 0.423001
#> theta (batch 1): 0.559416
#> betas:    0.8773  -0.1481   0.5352   0.8146   0.4245   0.7304   0.4720  -0.1628   0.3921   0.0434  -0.5773   0.2004
#> 
#> sigma: 0.143369
#> lambda (gene 1): 1.16099
#> epsilon (gene 1): -0.0548073
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 8520 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 550.816
#> delta (gene 1): 0.719284
#> phi (cell 1): 0.863236
#> s (cell 1): 0.452619
#> nu (cell 1): 0.417171
#> theta (batch 1): 0.0910025
#> betas:    0.7729  -0.0268   0.2609   0.8687   0.7477   0.6273   0.1587   0.2961  -0.5644  -0.0712  -0.6872  -0.1453
#> 
#> sigma: 0.182512
#> lambda (gene 1): 1.63522
#> epsilon (gene 1): 0.00975221
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 8540 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 480.854
#> delta (gene 1): 0.965221
#> phi (cell 1): 0.933964
#> s (cell 1): 0.365212
#> nu (cell 1): 0.415946
#> theta (batch 1): 0.0380931
#> betas:    0.2876  -0.0769   0.9000   0.9074   0.8333   0.2581   0.8865  -0.0583   0.2892   0.1003  -0.5055   0.3624
#> 
#> sigma: 0.166217
#> lambda (gene 1): 1.28248
#> epsilon (gene 1): 0.162266
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 8560 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 909.803
#> delta (gene 1): 0.525959
#> phi (cell 1): 0.976251
#> s (cell 1): 0.470952
#> nu (cell 1): 0.41313
#> theta (batch 1): 0.0163371
#> betas:    1.2058  -0.0802   0.3585   1.2134   0.3572  -0.1185   0.8278  -0.0850  -0.2143  -0.1954  -0.6814  -0.0982
#> 
#> sigma: 0.227253
#> lambda (gene 1): 1.65475
#> epsilon (gene 1): -0.442642
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 8580 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 560.906
#> delta (gene 1): 0.593437
#> phi (cell 1): 0.969348
#> s (cell 1): 0.39145
#> nu (cell 1): 0.417264
#> theta (batch 1): 0.0280694
#> betas:    0.7647  -0.0410   0.4199   0.8181   0.4651   0.5970   0.0538   0.2984   0.2071  -0.7358  -0.4312   0.1622
#> 
#> sigma: 0.160259
#> lambda (gene 1): 0.189762
#> epsilon (gene 1): -0.200415
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 8600 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 778.191
#> delta (gene 1): 0.489865
#> phi (cell 1): 0.914885
#> s (cell 1): 0.430538
#> nu (cell 1): 0.420396
#> theta (batch 1): 0.00453248
#> betas:    0.3753   0.0461   0.7446   1.1738   0.6858   0.2953   0.6597   0.1143  -0.0826  -0.0362  -0.8174  -0.3127
#> 
#> sigma: 0.204227
#> lambda (gene 1): 0.932638
#> epsilon (gene 1): -0.639065
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 8620 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 738.795
#> delta (gene 1): 0.977335
#> phi (cell 1): 0.855014
#> s (cell 1): 0.3975
#> nu (cell 1): 0.429073
#> theta (batch 1): 0.00265508
#> betas:    1.4196  -0.2847   0.5215   0.3681   0.4396   0.6069   0.3884   0.4400  -0.1281  -0.1184   0.2074   0.3576
#> 
#> sigma: 0.14186
#> lambda (gene 1): 0.44921
#> epsilon (gene 1): 0.28254
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 8640 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 788.483
#> delta (gene 1): 0.656708
#> phi (cell 1): 0.853815
#> s (cell 1): 0.362504
#> nu (cell 1): 0.425412
#> theta (batch 1): 0.014317
#> betas:    0.8403  -0.2297   0.4825   0.9511   0.8696   0.6948   0.5395   0.2423   0.5702  -0.3788   0.4551   0.1879
#> 
#> sigma: 0.179571
#> lambda (gene 1): 0.675365
#> epsilon (gene 1): -0.198511
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 8660 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 718.433
#> delta (gene 1): 0.588422
#> phi (cell 1): 0.814058
#> s (cell 1): 0.427986
#> nu (cell 1): 0.425989
#> theta (batch 1): 0.00577617
#> betas:    0.3766   0.0065   0.6287   0.6926   0.6346   0.6342   0.5844  -0.0290  -0.3827   0.5584  -0.9610  -0.1594
#> 
#> sigma: 0.208859
#> lambda (gene 1): 0.514487
#> epsilon (gene 1): -0.493836
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 8680 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 686.241
#> delta (gene 1): 0.546768
#> phi (cell 1): 0.777835
#> s (cell 1): 0.463535
#> nu (cell 1): 0.405392
#> theta (batch 1): 0.0074702
#> betas:    0.1867   0.0356   0.9506   1.2362   0.6504   0.6433   0.9321  -0.5350   0.2588  -0.4639  -0.0522  -0.8317
#> 
#> sigma: 0.217921
#> lambda (gene 1): 1.30934
#> epsilon (gene 1): -0.371932
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 8700 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 749.926
#> delta (gene 1): 1.09183
#> phi (cell 1): 0.764658
#> s (cell 1): 0.47985
#> nu (cell 1): 0.430571
#> theta (batch 1): 0.0207426
#> betas:    0.7691   0.0126   0.8181   0.3258   0.5934   0.5461  -0.1804   0.7128  -0.4960  -0.5081   0.0482  -1.0847
#> 
#> sigma: 0.161627
#> lambda (gene 1): 0.729162
#> epsilon (gene 1): 0.196282
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 8720 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 835.599
#> delta (gene 1): 0.617142
#> phi (cell 1): 0.809642
#> s (cell 1): 0.862862
#> nu (cell 1): 0.431027
#> theta (batch 1): 0.225196
#> betas:    0.6856  -0.0808   0.2129   0.8356   0.8302   0.6665   0.2745   0.2493   0.0763  -0.1372  -0.4284   0.0559
#> 
#> sigma: 0.164349
#> lambda (gene 1): 1.41434
#> epsilon (gene 1): -0.297287
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 8740 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 776.755
#> delta (gene 1): 0.483408
#> phi (cell 1): 0.827535
#> s (cell 1): 0.657715
#> nu (cell 1): 0.42425
#> theta (batch 1): 0.164994
#> betas:    0.7905   0.0090   0.9291   0.6546   0.4508   0.5408   0.1243  -0.2170   0.1923  -0.8423  -0.1136  -0.5017
#> 
#> sigma: 0.139227
#> lambda (gene 1): 0.802208
#> epsilon (gene 1): -0.590561
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 8760 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 800.213
#> delta (gene 1): 0.536872
#> phi (cell 1): 0.862365
#> s (cell 1): 0.894664
#> nu (cell 1): 0.422242
#> theta (batch 1): 0.260385
#> betas:    1.2735  -0.1802   0.5811   0.8827   0.3708   0.5919   0.2111   0.0180   0.3934  -0.3388  -0.3361   0.1297
#> 
#> sigma: 0.121349
#> lambda (gene 1): 3.12623
#> epsilon (gene 1): -0.408523
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 8780 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 683.384
#> delta (gene 1): 0.73342
#> phi (cell 1): 0.737193
#> s (cell 1): 0.572918
#> nu (cell 1): 0.419665
#> theta (batch 1): 0.298892
#> betas:    0.6894   0.0842   1.0218   0.1221   0.7599   0.5163   0.0827  -0.0250  -0.3571  -0.4712  -0.7086  -0.7732
#> 
#> sigma: 0.143732
#> lambda (gene 1): 0.696158
#> epsilon (gene 1): -0.0920337
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 8800 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 646.501
#> delta (gene 1): 0.920138
#> phi (cell 1): 0.788878
#> s (cell 1): 0.218193
#> nu (cell 1): 0.422049
#> theta (batch 1): 0.0720386
#> betas:    1.0904  -0.2331   0.5125   0.8479   0.7947   0.3755   0.6400   0.0349   0.2458   0.4254  -0.3887   0.4506
#> 
#> sigma: 0.147211
#> lambda (gene 1): 0.908987
#> epsilon (gene 1): -0.0710796
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 8820 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 601.729
#> delta (gene 1): 0.641873
#> phi (cell 1): 0.789854
#> s (cell 1): 0.75729
#> nu (cell 1): 0.433
#> theta (batch 1): 0.0716757
#> betas:    1.2101  -0.1002   0.3575   0.5849   0.9340   0.4301  -0.1032   0.3144  -0.1428  -0.5433  -0.1911  -0.5306
#> 
#> sigma: 0.144335
#> lambda (gene 1): 0.4733
#> epsilon (gene 1): -0.117002
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 8840 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 583.928
#> delta (gene 1): 0.749393
#> phi (cell 1): 0.886362
#> s (cell 1): 0.292648
#> nu (cell 1): 0.410397
#> theta (batch 1): 0.0785553
#> betas:    1.0263  -0.0607   0.4102   0.5222   1.0619   0.1023  -0.1022   0.4188  -0.1299  -0.5707  -0.1288  -0.6778
#> 
#> sigma: 0.197746
#> lambda (gene 1): 1.29723
#> epsilon (gene 1): -0.0476254
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 8860 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 698.744
#> delta (gene 1): 0.534856
#> phi (cell 1): 0.848361
#> s (cell 1): 0.478031
#> nu (cell 1): 0.436146
#> theta (batch 1): 0.584762
#> betas:    1.0623  -0.1497   0.5023   0.6779   0.5412   0.8024   0.1430   0.4545  -0.4443   0.1958  -0.2796  -0.2733
#> 
#> sigma: 0.115874
#> lambda (gene 1): 1.47344
#> epsilon (gene 1): -0.408811
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 8880 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 696.401
#> delta (gene 1): 0.686143
#> phi (cell 1): 0.935392
#> s (cell 1): 3.51927
#> nu (cell 1): 0.43001
#> theta (batch 1): 0.344757
#> betas:    0.8066  -0.0146   0.7242   0.5317   0.8458  -0.0620   0.6343  -0.1425  -0.3874   0.2604  -1.1352  -0.3837
#> 
#> sigma: 0.174403
#> lambda (gene 1): 1.37055
#> epsilon (gene 1): -0.108159
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 8900 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 706.12
#> delta (gene 1): 0.771714
#> phi (cell 1): 0.918493
#> s (cell 1): 0.402472
#> nu (cell 1): 0.415483
#> theta (batch 1): 0.365851
#> betas:    0.7390  -0.0571   0.2944   0.5652   1.4563   0.3557  -0.0806   0.4195  -0.0145  -0.2306  -0.3272  -0.3721
#> 
#> sigma: 0.166017
#> lambda (gene 1): 1.18772
#> epsilon (gene 1): -0.108325
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 8920 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 830.921
#> delta (gene 1): 0.492995
#> phi (cell 1): 0.731488
#> s (cell 1): 0.731904
#> nu (cell 1): 0.415789
#> theta (batch 1): 0.451008
#> betas:    0.5779  -0.0811   1.1104   0.7432   0.2309   0.8301   0.2910   0.4248  -0.0857  -0.1293  -0.1724  -0.2500
#> 
#> sigma: 0.155195
#> lambda (gene 1): 1.3951
#> epsilon (gene 1): -0.458875
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 8940 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 707.278
#> delta (gene 1): 0.631461
#> phi (cell 1): 0.661554
#> s (cell 1): 0.508969
#> nu (cell 1): 0.417477
#> theta (batch 1): 0.295741
#> betas:    0.6407  -0.0640   0.1303   0.7983   0.8555   0.1756   0.6129   0.3805  -0.5289   0.2430  -0.5671  -0.2812
#> 
#> sigma: 0.15327
#> lambda (gene 1): 0.242561
#> epsilon (gene 1): -0.160657
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 8960 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 597
#> delta (gene 1): 0.574142
#> phi (cell 1): 0.648534
#> s (cell 1): 0.311483
#> nu (cell 1): 0.41113
#> theta (batch 1): 0.240741
#> betas:    0.4675  -0.0933   0.4740   0.9168   1.0476   0.5773   0.3661  -0.0494   0.9324  -0.7815   0.3116  -0.3901
#> 
#> sigma: 0.156708
#> lambda (gene 1): 0.145768
#> epsilon (gene 1): -0.355902
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 8980 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 669.705
#> delta (gene 1): 0.627702
#> phi (cell 1): 0.677674
#> s (cell 1): 0.363021
#> nu (cell 1): 0.444611
#> theta (batch 1): 0.465827
#> betas:    0.8429   0.0043   0.7297   0.2112   0.9378   0.3988   0.1366  -0.3858   0.6410  -0.9048  -0.6209  -0.4686
#> 
#> sigma: 0.163311
#> lambda (gene 1): 1.13438
#> epsilon (gene 1): -0.1665
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 9000 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 691.559
#> delta (gene 1): 0.704493
#> phi (cell 1): 0.68222
#> s (cell 1): 0.41363
#> nu (cell 1): 0.425797
#> theta (batch 1): 0.056605
#> betas:    0.7793  -0.0528   0.8263   0.8533   0.4314   0.8576  -0.1057   0.2845   0.1885  -0.5898  -0.1047  -0.4660
#> 
#> sigma: 0.145082
#> lambda (gene 1): 1.21047
#> epsilon (gene 1): -0.156352
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 9020 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 608.523
#> delta (gene 1): 0.655068
#> phi (cell 1): 0.592745
#> s (cell 1): 0.559793
#> nu (cell 1): 0.418269
#> theta (batch 1): 0.296185
#> betas:    1.4058  -0.1255   0.8664   0.4690   0.6104   0.1108   0.1552   0.2317  -0.5182  -0.1404   0.0828  -0.6831
#> 
#> sigma: 0.124771
#> lambda (gene 1): 0.640602
#> epsilon (gene 1): -0.436173
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 9040 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 638.842
#> delta (gene 1): 0.615631
#> phi (cell 1): 0.670787
#> s (cell 1): 0.556657
#> nu (cell 1): 0.423576
#> theta (batch 1): 0.102118
#> betas:    0.4755   0.0442   1.2457   0.4375   0.7465   0.7737  -0.1152   0.2579  -0.2201  -0.1631  -0.8607  -0.3029
#> 
#> sigma: 0.129628
#> lambda (gene 1): 0.825979
#> epsilon (gene 1): -0.257857
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 9060 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 628.083
#> delta (gene 1): 0.721778
#> phi (cell 1): 0.689335
#> s (cell 1): 0.421065
#> nu (cell 1): 0.421966
#> theta (batch 1): 0.168062
#> betas:    1.3701  -0.2795   0.2652   0.6807   0.8566   0.2824   0.8980   0.3484  -0.2496   0.1638   0.0628   0.4330
#> 
#> sigma: 0.215468
#> lambda (gene 1): 1.58086
#> epsilon (gene 1): -0.116984
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 9080 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 619.59
#> delta (gene 1): 0.631297
#> phi (cell 1): 0.806295
#> s (cell 1): 0.664882
#> nu (cell 1): 0.426394
#> theta (batch 1): 0.404733
#> betas:    0.7087  -0.0742   0.5848   0.3586   1.0412   0.3362   0.1324   0.5753  -0.1084  -0.2264  -0.5636   0.3676
#> 
#> sigma: 0.129174
#> lambda (gene 1): 1.25151
#> epsilon (gene 1): -0.183647
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 9100 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 631.149
#> delta (gene 1): 0.692428
#> phi (cell 1): 0.775881
#> s (cell 1): 1.0504
#> nu (cell 1): 0.417436
#> theta (batch 1): 0.285994
#> betas:    0.8634  -0.1750   0.2036   0.7119   0.8993   1.0071  -0.2180   0.4799   0.2886  -0.3032   0.0547   0.0058
#> 
#> sigma: 0.160732
#> lambda (gene 1): 1.91399
#> epsilon (gene 1): -0.0919525
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 9120 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 621.783
#> delta (gene 1): 0.483467
#> phi (cell 1): 0.744312
#> s (cell 1): 0.747983
#> nu (cell 1): 0.427204
#> theta (batch 1): 0.494006
#> betas:    0.9818  -0.0472   0.6339   0.8085   0.4821   0.3881   0.2156   0.0710  -0.0030  -0.5960  -0.4127  -0.1430
#> 
#> sigma: 0.188758
#> lambda (gene 1): 0.706117
#> epsilon (gene 1): -0.466276
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 9140 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 576.499
#> delta (gene 1): 0.760052
#> phi (cell 1): 0.703357
#> s (cell 1): 0.438703
#> nu (cell 1): 0.412718
#> theta (batch 1): 0.197192
#> betas:    0.4928  -0.0569   0.6964   0.6593   0.9869   0.5981   0.3724  -0.0890   0.3542  -0.2395  -0.5873   0.3926
#> 
#> sigma: 0.123869
#> lambda (gene 1): 1.79274
#> epsilon (gene 1): -0.0421634
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 9160 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 739.409
#> delta (gene 1): 0.621408
#> phi (cell 1): 0.663133
#> s (cell 1): 0.807723
#> nu (cell 1): 0.423383
#> theta (batch 1): 0.322661
#> betas:    1.1047  -0.1526   0.0250   1.1118   0.4363   0.5853   0.3975   0.2383  -0.1757  -0.2085   0.2733  -0.5036
#> 
#> sigma: 0.137147
#> lambda (gene 1): 0.126245
#> epsilon (gene 1): -0.370408
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 9180 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 620.037
#> delta (gene 1): 0.684923
#> phi (cell 1): 0.686002
#> s (cell 1): 0.592032
#> nu (cell 1): 0.40721
#> theta (batch 1): 0.576365
#> betas:    0.1404   0.0260   0.5714   1.0494   0.5052   1.1421   0.3243  -0.2381   0.8035  -0.9163   0.1200  -0.5052
#> 
#> sigma: 0.17677
#> lambda (gene 1): 1.1914
#> epsilon (gene 1): -0.209099
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 9200 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 542.971
#> delta (gene 1): 0.808744
#> phi (cell 1): 0.81374
#> s (cell 1): 0.454009
#> nu (cell 1): 0.424097
#> theta (batch 1): 0.202549
#> betas:    1.0648  -0.1306   0.1287   0.9842   0.7368   0.5141   0.1199   0.5287  -0.0885  -0.6694   0.3578  -0.2987
#> 
#> sigma: 0.146494
#> lambda (gene 1): 1.44462
#> epsilon (gene 1): 0.0129815
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 9220 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 792.348
#> delta (gene 1): 0.678307
#> phi (cell 1): 0.717843
#> s (cell 1): 1.87129
#> nu (cell 1): 0.430122
#> theta (batch 1): 0.646604
#> betas:    0.5739  -0.0207   0.8932   0.9085   0.3019   0.6763   0.4267  -0.3205   0.4472  -0.6221  -0.5356  -0.2413
#> 
#> sigma: 0.187374
#> lambda (gene 1): 1.19386
#> epsilon (gene 1): 0.0345148
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 9240 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 722.196
#> delta (gene 1): 0.422243
#> phi (cell 1): 0.687442
#> s (cell 1): 0.380567
#> nu (cell 1): 0.425513
#> theta (batch 1): 0.287624
#> betas:    0.1117  -0.0085   0.7991   1.2556   0.3530   1.3347  -0.0609   0.5368   0.3210  -0.5728  -0.2026   0.0505
#> 
#> sigma: 0.165793
#> lambda (gene 1): 0.714896
#> epsilon (gene 1): -0.530816
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 9260 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 562.02
#> delta (gene 1): 0.63002
#> phi (cell 1): 0.773557
#> s (cell 1): 0.253034
#> nu (cell 1): 0.421615
#> theta (batch 1): 0.14371
#> betas:    0.7830  -0.0907   0.5181   0.6619   0.8104   0.4227   0.4843  -0.2330   0.5364  -0.6142  -0.1452  -0.1103
#> 
#> sigma: 0.119379
#> lambda (gene 1): 1.46889
#> epsilon (gene 1): -0.203936
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 9280 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 858.785
#> delta (gene 1): 0.595067
#> phi (cell 1): 0.731594
#> s (cell 1): 1.00081
#> nu (cell 1): 0.429532
#> theta (batch 1): 0.446834
#> betas:    0.4948  -0.0163   0.8848   0.5317   0.8404   0.4254   0.5355   0.0815   0.0179  -0.1316  -0.5648  -0.5332
#> 
#> sigma: 0.193551
#> lambda (gene 1): 1.20322
#> epsilon (gene 1): -0.236753
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 9300 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 552.566
#> delta (gene 1): 0.590398
#> phi (cell 1): 0.698637
#> s (cell 1): 0.382011
#> nu (cell 1): 0.410535
#> theta (batch 1): 0.164889
#> betas:    1.0146  -0.0933   1.0716   0.8172   0.2929   0.6854   0.6552  -0.4458   0.3765  -0.2830  -0.3926  -0.3454
#> 
#> sigma: 0.133894
#> lambda (gene 1): 0.529346
#> epsilon (gene 1): -0.413676
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 9320 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 692.512
#> delta (gene 1): 0.50997
#> phi (cell 1): 0.76844
#> s (cell 1): 0.724926
#> nu (cell 1): 0.42768
#> theta (batch 1): 0.238255
#> betas:    1.1031  -0.0939   0.6314   0.3182   0.5789   0.3277   0.4895   0.0829  -0.2034   0.5909  -1.5105   0.4006
#> 
#> sigma: 0.241839
#> lambda (gene 1): 1.34098
#> epsilon (gene 1): -0.608263
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 9340 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 780.49
#> delta (gene 1): 0.607332
#> phi (cell 1): 0.850542
#> s (cell 1): 0.666029
#> nu (cell 1): 0.429717
#> theta (batch 1): 0.382735
#> betas:    0.9859  -0.0347   0.5386   1.2302   0.0238   0.6477   0.1016   0.0333  -0.1506  -0.5751  -0.1676  -0.8316
#> 
#> sigma: 0.235562
#> lambda (gene 1): 0.398671
#> epsilon (gene 1): -0.225351
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 9360 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 771.543
#> delta (gene 1): 0.576094
#> phi (cell 1): 0.754835
#> s (cell 1): 0.740374
#> nu (cell 1): 0.422845
#> theta (batch 1): 0.338008
#> betas:    0.7182  -0.1155   0.9287   0.4659   0.9050   0.5732   0.4055  -0.0478   0.6294  -0.3319  -0.1913  -0.0790
#> 
#> sigma: 0.166895
#> lambda (gene 1): 1.62643
#> epsilon (gene 1): -0.415464
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 9380 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 660.401
#> delta (gene 1): 0.669122
#> phi (cell 1): 0.677557
#> s (cell 1): 0.54631
#> nu (cell 1): 0.41339
#> theta (batch 1): 0.141496
#> betas:    0.7117  -0.0722   0.5178   0.5486   0.9172   0.5937   0.1236   0.2263   0.3073  -0.3711  -0.1994  -0.2960
#> 
#> sigma: 0.139616
#> lambda (gene 1): 0.746828
#> epsilon (gene 1): -0.278177
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 9400 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 916.955
#> delta (gene 1): 1.06691
#> phi (cell 1): 0.641301
#> s (cell 1): 0.460626
#> nu (cell 1): 0.419333
#> theta (batch 1): 0.16842
#> betas:    0.7956  -0.1591   0.9725   0.9848   0.9759   0.0821   0.5286   0.4122   0.1026  -0.1116   0.0806   0.0041
#> 
#> sigma: 0.159892
#> lambda (gene 1): 1.70543
#> epsilon (gene 1): 0.204159
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 9420 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 565.426
#> delta (gene 1): 0.924498
#> phi (cell 1): 0.639919
#> s (cell 1): 0.543003
#> nu (cell 1): 0.412838
#> theta (batch 1): 0.39132
#> betas:    1.2014  -0.0538   0.3782   0.9485   0.1253   0.3009   0.3235  -0.3139   0.1302  -0.4226  -0.5520  -0.5476
#> 
#> sigma: 0.139288
#> lambda (gene 1): 1.20135
#> epsilon (gene 1): 0.049061
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 9440 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 524.414
#> delta (gene 1): 0.709027
#> phi (cell 1): 0.694454
#> s (cell 1): 0.421084
#> nu (cell 1): 0.427279
#> theta (batch 1): 0.271163
#> betas:    0.6833  -0.1369   0.7556   1.0158   0.4137   0.9177   0.4293  -0.0752   0.6132  -0.1858  -0.7274   0.7143
#> 
#> sigma: 0.185723
#> lambda (gene 1): 0.963937
#> epsilon (gene 1): 0.0154254
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 9460 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 687.133
#> delta (gene 1): 0.905232
#> phi (cell 1): 0.701386
#> s (cell 1): 0.286372
#> nu (cell 1): 0.415462
#> theta (batch 1): 0.173867
#> betas:    0.4424  -0.0533   0.0070   0.9538   0.8002   1.0619  -0.1514   0.1832   0.5908  -0.4001  -0.3270  -0.0975
#> 
#> sigma: 0.139008
#> lambda (gene 1): 2.21678
#> epsilon (gene 1): 0.0686847
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 9480 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 812.653
#> delta (gene 1): 0.506899
#> phi (cell 1): 0.755155
#> s (cell 1): 0.502061
#> nu (cell 1): 0.42359
#> theta (batch 1): 0.197964
#> betas:    1.1876  -0.0993   0.3939   0.7815   0.4805   0.6140  -0.0279  -0.3596   0.8885  -0.9975  -0.5196   0.2848
#> 
#> sigma: 0.191615
#> lambda (gene 1): 0.734147
#> epsilon (gene 1): -0.401393
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 9500 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 941.488
#> delta (gene 1): 0.739799
#> phi (cell 1): 0.760968
#> s (cell 1): 0.842214
#> nu (cell 1): 0.428387
#> theta (batch 1): 0.3511
#> betas:    1.0558  -0.1653   1.0054   0.6384   0.5770   0.6762  -0.0979   0.3575   0.4582  -0.4046  -0.2265   0.1513
#> 
#> sigma: 0.121006
#> lambda (gene 1): 0.664065
#> epsilon (gene 1): -0.0975619
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 9520 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 786.573
#> delta (gene 1): 0.729187
#> phi (cell 1): 0.741567
#> s (cell 1): 0.526068
#> nu (cell 1): 0.434291
#> theta (batch 1): 0.114026
#> betas:    0.6147  -0.0469   0.3642   0.4060   1.0700   0.6946   0.0833   0.1396   0.0752  -0.1054  -0.7353  -0.0867
#> 
#> sigma: 0.147368
#> lambda (gene 1): 0.956126
#> epsilon (gene 1): -0.0104771
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 9540 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 652.838
#> delta (gene 1): 0.618855
#> phi (cell 1): 0.754334
#> s (cell 1): 0.33193
#> nu (cell 1): 0.42334
#> theta (batch 1): 0.209747
#> betas:    0.8147  -0.1158   0.6344   0.6000   0.7402   0.7883  -0.0668   0.8028  -0.3145   0.0316  -0.2386  -0.2434
#> 
#> sigma: 0.145978
#> lambda (gene 1): 1.38719
#> epsilon (gene 1): -0.267823
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 9560 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 817.049
#> delta (gene 1): 0.980659
#> phi (cell 1): 0.754808
#> s (cell 1): 1.50649
#> nu (cell 1): 0.428332
#> theta (batch 1): 0.451402
#> betas:    0.7658   0.0333   0.8473   0.5574   0.6939   0.2202   0.2971   0.0721  -0.0913  -0.6681  -0.5752  -0.4598
#> 
#> sigma: 0.126345
#> lambda (gene 1): 0.539132
#> epsilon (gene 1): 0.263867
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 9580 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 689.134
#> delta (gene 1): 0.667208
#> phi (cell 1): 0.760479
#> s (cell 1): 0.71282
#> nu (cell 1): 0.428368
#> theta (batch 1): 0.602746
#> betas:    0.9149  -0.0539   0.6423   0.5908   0.6365   0.5611  -0.1448   0.5025  -0.1275  -0.3954  -0.3991  -0.1477
#> 
#> sigma: 0.157731
#> lambda (gene 1): 0.696598
#> epsilon (gene 1): -0.239659
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 9600 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 626.43
#> delta (gene 1): 0.688887
#> phi (cell 1): 0.848309
#> s (cell 1): 0.655156
#> nu (cell 1): 0.433634
#> theta (batch 1): 0.56329
#> betas:    1.0047  -0.1792  -0.0359   1.1307   0.8720   0.2656   0.3678   0.1138   0.4342  -0.1459  -0.1780   0.1049
#> 
#> sigma: 0.155151
#> lambda (gene 1): 1.11468
#> epsilon (gene 1): -0.253858
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 9620 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 639.945
#> delta (gene 1): 0.700641
#> phi (cell 1): 0.797385
#> s (cell 1): 0.489788
#> nu (cell 1): 0.41732
#> theta (batch 1): 0.197498
#> betas:    0.5029  -0.0117   0.6804   0.0992   1.2353   0.4326  -0.0014   0.4421  -0.2040  -0.0760  -0.5833  -0.3245
#> 
#> sigma: 0.129658
#> lambda (gene 1): 0.501365
#> epsilon (gene 1): -0.127847
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 9640 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 672.377
#> delta (gene 1): 0.750657
#> phi (cell 1): 0.849095
#> s (cell 1): 0.51507
#> nu (cell 1): 0.434254
#> theta (batch 1): 0.359382
#> betas:    1.0859  -0.1560   0.6243   0.7936   0.8235   0.3020   0.7448  -0.2233   0.0083   0.2159  -0.4004  -0.1870
#> 
#> sigma: 0.179968
#> lambda (gene 1): 2.05087
#> epsilon (gene 1): -0.174229
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 9660 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 730.774
#> delta (gene 1): 0.677364
#> phi (cell 1): 0.835354
#> s (cell 1): 0.404145
#> nu (cell 1): 0.409775
#> theta (batch 1): 0.0556431
#> betas:    1.1501  -0.1620   0.6566   0.6365   0.6830   0.3663   0.4571   0.6196  -0.2822  -0.0576  -0.6231   0.4170
#> 
#> sigma: 0.150406
#> lambda (gene 1): 1.18076
#> epsilon (gene 1): -0.0153919
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 9680 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 673.429
#> delta (gene 1): 0.590463
#> phi (cell 1): 0.882094
#> s (cell 1): 0.470445
#> nu (cell 1): 0.425574
#> theta (batch 1): 0.0599162
#> betas:    0.6927  -0.0492   0.6457   0.7307   0.8390   0.4402   0.2420   0.5118  -0.2325  -0.3717   0.0834  -0.6301
#> 
#> sigma: 0.145429
#> lambda (gene 1): 0.565345
#> epsilon (gene 1): -0.368655
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 9700 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 813.053
#> delta (gene 1): 0.637231
#> phi (cell 1): 0.861862
#> s (cell 1): 0.569517
#> nu (cell 1): 0.422426
#> theta (batch 1): 0.141047
#> betas:    0.4213   0.0118   0.7768   0.8665   0.7762   0.4755   0.0747   0.8238  -0.8405   0.4126  -0.8849  -0.2672
#> 
#> sigma: 0.137437
#> lambda (gene 1): 0.782866
#> epsilon (gene 1): -0.241155
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 9720 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 666.362
#> delta (gene 1): 0.655573
#> phi (cell 1): 0.794213
#> s (cell 1): 0.220457
#> nu (cell 1): 0.414157
#> theta (batch 1): 0.299312
#> betas:    0.6787  -0.1324   0.5789   0.7403   0.7957   0.5150   0.4535   0.4240  -0.2950   0.3051  -0.2247   0.0711
#> 
#> sigma: 0.183862
#> lambda (gene 1): 2.21922
#> epsilon (gene 1): -0.288533
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 9740 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 799.308
#> delta (gene 1): 0.458054
#> phi (cell 1): 0.66737
#> s (cell 1): 0.439944
#> nu (cell 1): 0.42671
#> theta (batch 1): 0.351749
#> betas:    0.5067  -0.0135   0.9475   0.8524   0.7478   0.4807   0.4254  -0.1694   0.5775  -0.3813  -0.8315  -0.2191
#> 
#> sigma: 0.16407
#> lambda (gene 1): 0.261691
#> epsilon (gene 1): -0.47497
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 9760 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 806.495
#> delta (gene 1): 0.773422
#> phi (cell 1): 0.739627
#> s (cell 1): 0.342535
#> nu (cell 1): 0.427076
#> theta (batch 1): 0.560302
#> betas:    1.1069  -0.1148   0.7852   0.6192   0.2301   0.5639   0.1943   0.3083  -0.2651  -0.0789  -0.0847  -0.7175
#> 
#> sigma: 0.185407
#> lambda (gene 1): 0.293934
#> epsilon (gene 1): -0.148832
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 9780 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 849.031
#> delta (gene 1): 0.622759
#> phi (cell 1): 0.688107
#> s (cell 1): 0.540382
#> nu (cell 1): 0.418133
#> theta (batch 1): 0.303762
#> betas:    0.7784  -0.0832   1.0339   0.8287   0.9701   0.1470   0.8447   0.2334  -0.2981  -0.0599  -0.1357  -0.5227
#> 
#> sigma: 0.169312
#> lambda (gene 1): 1.03264
#> epsilon (gene 1): -0.268514
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 9800 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 654.89
#> delta (gene 1): 0.668713
#> phi (cell 1): 0.682013
#> s (cell 1): 0.66369
#> nu (cell 1): 0.426845
#> theta (batch 1): 0.467879
#> betas:    0.9888  -0.2070   0.0977   1.3347   0.0863   0.4766   1.0647  -0.0040   0.2757   0.0817  -0.6874   0.8492
#> 
#> sigma: 0.204953
#> lambda (gene 1): 0.710702
#> epsilon (gene 1): -0.0344537
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 9820 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 507.179
#> delta (gene 1): 0.547497
#> phi (cell 1): 0.742631
#> s (cell 1): 0.273069
#> nu (cell 1): 0.427028
#> theta (batch 1): 0.19999
#> betas:    0.8022  -0.0616   0.7768   1.0405   0.6152   0.1871   0.5715   0.0478  -0.0358  -0.0676  -0.6208  -0.0971
#> 
#> sigma: 0.131882
#> lambda (gene 1): 1.10392
#> epsilon (gene 1): -0.432972
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 9840 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 583.888
#> delta (gene 1): 0.721321
#> phi (cell 1): 0.719655
#> s (cell 1): 0.552557
#> nu (cell 1): 0.429227
#> theta (batch 1): 0.214991
#> betas:    1.1134  -0.1619   0.4887   0.5637   0.7264   0.3622   0.5039  -0.1741   0.5377  -0.3885  -0.2119  -0.0616
#> 
#> sigma: 0.112102
#> lambda (gene 1): 1.02238
#> epsilon (gene 1): -0.126671
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 9860 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 831.781
#> delta (gene 1): 0.893169
#> phi (cell 1): 0.734757
#> s (cell 1): 0.367533
#> nu (cell 1): 0.434434
#> theta (batch 1): 0.030457
#> betas:    1.1445  -0.1024   0.4668   0.7057   0.3687   0.8298  -0.0732   0.0195  -0.0067  -0.2816  -0.7752   0.0453
#> 
#> sigma: 0.185424
#> lambda (gene 1): 0.660789
#> epsilon (gene 1): 0.282213
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 9880 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 620.454
#> delta (gene 1): 0.898542
#> phi (cell 1): 0.76089
#> s (cell 1): 0.407898
#> nu (cell 1): 0.420107
#> theta (batch 1): 0.0167822
#> betas:    0.6359  -0.0772   1.1693   0.4035   0.6625   0.7422   0.0419   0.5094   0.1251  -0.3888  -0.0463  -0.2886
#> 
#> sigma: 0.170489
#> lambda (gene 1): 3.19468
#> epsilon (gene 1): 0.0852944
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 9900 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 673.148
#> delta (gene 1): 0.562152
#> phi (cell 1): 0.71801
#> s (cell 1): 0.475305
#> nu (cell 1): 0.432935
#> theta (batch 1): 0.028406
#> betas:    0.6414  -0.0119   0.5278   0.8328   0.3355   0.5629   0.1069   0.4227  -0.1400  -0.4861  -0.2441  -0.3412
#> 
#> sigma: 0.172273
#> lambda (gene 1): 0.998251
#> epsilon (gene 1): -0.372387
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 9920 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 763.456
#> delta (gene 1): 0.625213
#> phi (cell 1): 0.697931
#> s (cell 1): 0.455703
#> nu (cell 1): 0.425052
#> theta (batch 1): 0.0227239
#> betas:    1.2009  -0.1219   0.5658   0.7356   0.7205   0.2351   0.3967  -0.1105   0.1693  -0.1600  -0.5403  -0.2199
#> 
#> sigma: 0.149211
#> lambda (gene 1): 0.692305
#> epsilon (gene 1): -0.324562
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 9940 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 684.325
#> delta (gene 1): 1.07732
#> phi (cell 1): 0.780727
#> s (cell 1): 0.352166
#> nu (cell 1): 0.429111
#> theta (batch 1): 0.062925
#> betas:    0.8636  -0.0642   0.6160   0.7445   0.5623   0.5675   0.1905   0.0259   0.3494  -0.7042  -0.3136   0.1831
#> 
#> sigma: 0.126506
#> lambda (gene 1): 0.521107
#> epsilon (gene 1): 0.284457
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 9960 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 563.872
#> delta (gene 1): 0.704504
#> phi (cell 1): 0.819995
#> s (cell 1): 0.640556
#> nu (cell 1): 0.43266
#> theta (batch 1): 0.153827
#> betas:    1.2954  -0.1399   0.4794   0.8429   0.2976   0.6486   0.0569   0.2665  -0.5090   0.1831  -0.4771  -0.3371
#> 
#> sigma: 0.201901
#> lambda (gene 1): 0.808863
#> epsilon (gene 1): -0.164907
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 9980 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 780.735
#> delta (gene 1): 0.741852
#> phi (cell 1): 1.00692
#> s (cell 1): 0.380964
#> nu (cell 1): 0.407835
#> theta (batch 1): 0.091183
#> betas:    1.3087  -0.1448   0.6820   0.8364   0.3681   0.5213   0.3900   0.0344  -0.2106  -0.0628  -0.0565  -0.5540
#> 
#> sigma: 0.146824
#> lambda (gene 1): 1.26242
#> epsilon (gene 1): -0.262341
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 10000 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 790.452
#> delta (gene 1): 0.764193
#> phi (cell 1): 0.914675
#> s (cell 1): 0.417613
#> nu (cell 1): 0.417065
#> theta (batch 1): 0.216225
#> betas:    0.5848  -0.0827   0.4016   0.9020   0.9122   0.4752   0.5533   0.3867  -0.4653   0.2441  -0.1724  -0.4685
#> 
#> sigma: 0.111204
#> lambda (gene 1): 0.793792
#> epsilon (gene 1): -0.0782904
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 10020 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 654.314
#> delta (gene 1): 0.816177
#> phi (cell 1): 0.844309
#> s (cell 1): 0.248894
#> nu (cell 1): 0.4097
#> theta (batch 1): 0.471181
#> betas:    0.8759  -0.0409   1.0533   0.4320   0.1772   0.9969  -0.1016   0.0082  -0.0157  -0.2930  -0.2990  -0.6107
#> 
#> sigma: 0.124621
#> lambda (gene 1): 0.696721
#> epsilon (gene 1): -0.0999011
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 10040 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 682.915
#> delta (gene 1): 0.535171
#> phi (cell 1): 0.780752
#> s (cell 1): 0.455255
#> nu (cell 1): 0.433679
#> theta (batch 1): 0.459058
#> betas:    0.8144   0.0528   1.2919   0.4733   0.6612   0.1154   0.2196   0.0208  -0.4008  -0.0107  -1.1352  -0.6415
#> 
#> sigma: 0.181565
#> lambda (gene 1): 1.56266
#> epsilon (gene 1): -0.479611
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 10060 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 598.384
#> delta (gene 1): 0.475894
#> phi (cell 1): 0.808185
#> s (cell 1): 0.593641
#> nu (cell 1): 0.415616
#> theta (batch 1): 0.135948
#> betas:    0.8731   0.0140   1.1336   0.0786   0.6603   0.7358   0.2926  -0.5614   0.2422  -0.5995  -0.4922  -0.6564
#> 
#> sigma: 0.201754
#> lambda (gene 1): 2.28423
#> epsilon (gene 1): -0.596075
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 10080 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 812.221
#> delta (gene 1): 0.536016
#> phi (cell 1): 0.782779
#> s (cell 1): 0.428256
#> nu (cell 1): 0.423679
#> theta (batch 1): 0.0239365
#> betas:    1.2582  -0.2117   0.5636   0.8470   0.2824   0.3922   0.8270  -0.0453   0.2362  -0.0669  -0.0520  -0.2230
#> 
#> sigma: 0.131912
#> lambda (gene 1): 0.522731
#> epsilon (gene 1): -0.474715
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 10100 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 740.985
#> delta (gene 1): 0.722512
#> phi (cell 1): 0.750293
#> s (cell 1): 0.512523
#> nu (cell 1): 0.441658
#> theta (batch 1): 0.0473849
#> betas:    0.7021  -0.0516   0.1857   1.0562   0.4224   0.6136   0.3709  -0.0330   0.0819  -0.1811  -0.5616   0.1063
#> 
#> sigma: 0.157448
#> lambda (gene 1): 0.593728
#> epsilon (gene 1): -0.167071
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 10120 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 775.867
#> delta (gene 1): 1.12611
#> phi (cell 1): 0.742347
#> s (cell 1): 0.481949
#> nu (cell 1): 0.406004
#> theta (batch 1): 0.02209
#> betas:    0.8618  -0.1399   0.8683   0.6530   0.6931   0.6258   0.1313   0.3237   0.3264  -0.2691  -0.2570  -0.0208
#> 
#> sigma: 0.171816
#> lambda (gene 1): 2.02474
#> epsilon (gene 1): 0.371318
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 10140 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 743.299
#> delta (gene 1): 0.961488
#> phi (cell 1): 0.773991
#> s (cell 1): 0.480108
#> nu (cell 1): 0.422626
#> theta (batch 1): 0.0195547
#> betas:    1.0437  -0.1193   0.7140   0.7897   0.7529   0.1356   0.3975   0.0427   0.3199  -0.6603  -0.0809  -0.2396
#> 
#> sigma: 0.166076
#> lambda (gene 1): 1.53045
#> epsilon (gene 1): 0.269414
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 10160 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 783.586
#> delta (gene 1): 1.20965
#> phi (cell 1): 0.784003
#> s (cell 1): 0.500543
#> nu (cell 1): 0.417663
#> theta (batch 1): 0.0192725
#> betas:    0.6514   0.0047   0.5078   0.7888   0.8299   0.3527   0.2345   0.2429  -0.2916   0.0536  -0.8302  -0.4992
#> 
#> sigma: 0.164168
#> lambda (gene 1): 0.808076
#> epsilon (gene 1): 0.36166
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 10180 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 767.58
#> delta (gene 1): 0.734118
#> phi (cell 1): 0.806875
#> s (cell 1): 0.420464
#> nu (cell 1): 0.421205
#> theta (batch 1): 0.00696614
#> betas:    0.9566  -0.0481   0.5956   0.5154   1.1024   0.5493  -0.5316   0.3236   0.1330  -0.1698  -0.8562  -0.1180
#> 
#> sigma: 0.165901
#> lambda (gene 1): 1.83556
#> epsilon (gene 1): -0.227389
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 10200 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 654.601
#> delta (gene 1): 0.690206
#> phi (cell 1): 0.772282
#> s (cell 1): 0.430559
#> nu (cell 1): 0.428073
#> theta (batch 1): 0.00595331
#> betas:    1.0052  -0.1139   0.0128   0.9136   0.6172   0.4543   0.3004   0.1427   0.0260  -0.5805  -0.2176   0.0901
#> 
#> sigma: 0.196048
#> lambda (gene 1): 2.37874
#> epsilon (gene 1): 0.0408195
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 10220 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 874.115
#> delta (gene 1): 0.610317
#> phi (cell 1): 0.938971
#> s (cell 1): 0.388504
#> nu (cell 1): 0.412092
#> theta (batch 1): 0.0198386
#> betas:    1.6379  -0.1617   0.6112   0.3553   0.4823   0.3600  -0.0328   0.2628  -0.0485  -0.6572   0.1089  -0.6277
#> 
#> sigma: 0.152755
#> lambda (gene 1): 1.70856
#> epsilon (gene 1): -0.32566
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 10240 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 779.161
#> delta (gene 1): 0.849924
#> phi (cell 1): 0.934583
#> s (cell 1): 0.523674
#> nu (cell 1): 0.413629
#> theta (batch 1): 0.035453
#> betas:    0.6577  -0.0940   0.3467   1.2351   0.6884   0.6461   0.2568   0.3484  -0.0201  -0.2568   0.1523  -0.2952
#> 
#> sigma: 0.149928
#> lambda (gene 1): 1.00466
#> epsilon (gene 1): -0.040221
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 10260 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 599.787
#> delta (gene 1): 0.825616
#> phi (cell 1): 0.871452
#> s (cell 1): 0.818011
#> nu (cell 1): 0.42209
#> theta (batch 1): 0.10268
#> betas:    0.5826  -0.0811   0.8170   0.8538   0.1669   1.4514   0.2177   0.2764  -0.0041  -0.3710   0.2185  -0.4740
#> 
#> sigma: 0.157123
#> lambda (gene 1): 0.724407
#> epsilon (gene 1): 0.0389586
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 10280 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 642.674
#> delta (gene 1): 0.842299
#> phi (cell 1): 0.819328
#> s (cell 1): 0.127805
#> nu (cell 1): 0.401084
#> theta (batch 1): 0.359317
#> betas:    0.9079  -0.1000   0.2892   1.0695   0.5217   0.2667   0.8685   0.1314   0.0496  -0.4171  -0.6316   0.5326
#> 
#> sigma: 0.246177
#> lambda (gene 1): 0.795315
#> epsilon (gene 1): 0.236797
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 10300 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 762.81
#> delta (gene 1): 0.82078
#> phi (cell 1): 0.791783
#> s (cell 1): 0.650663
#> nu (cell 1): 0.431436
#> theta (batch 1): 0.289413
#> betas:    0.4149  -0.0112   0.6230   0.9083   1.1430   0.3056   0.4430   0.1439   0.1630  -0.3178  -0.5613   0.2308
#> 
#> sigma: 0.154132
#> lambda (gene 1): 1.05878
#> epsilon (gene 1): -0.0130477
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 10320 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 813.024
#> delta (gene 1): 0.525906
#> phi (cell 1): 0.855719
#> s (cell 1): 0.407573
#> nu (cell 1): 0.421944
#> theta (batch 1): 0.387696
#> betas:    0.6344  -0.0771   0.5433   0.7369   1.0502   0.3613   0.5505   0.0403   0.2204  -0.3299  -0.2984   0.0981
#> 
#> sigma: 0.193933
#> lambda (gene 1): 1.04037
#> epsilon (gene 1): -0.408443
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 10340 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 648.924
#> delta (gene 1): 0.861038
#> phi (cell 1): 0.696497
#> s (cell 1): 0.329705
#> nu (cell 1): 0.423348
#> theta (batch 1): 0.505761
#> betas:    0.4449  -0.0881   0.5005   1.1672   0.8072   0.4431   0.7527   0.0452   0.2325  -0.3273  -0.1516   0.0694
#> 
#> sigma: 0.140908
#> lambda (gene 1): 0.722549
#> epsilon (gene 1): 0.225256
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 10360 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 573.049
#> delta (gene 1): 0.490324
#> phi (cell 1): 0.713523
#> s (cell 1): 1.61908
#> nu (cell 1): 0.427428
#> theta (batch 1): 0.634712
#> betas:    0.9161  -0.1349   0.6222   0.8922   0.7430   0.3071   0.3313   0.2645  -0.2280   0.0582  -0.2372   0.0924
#> 
#> sigma: 0.123253
#> lambda (gene 1): 0.520831
#> epsilon (gene 1): -0.555289
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 10380 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 722.19
#> delta (gene 1): 0.568415
#> phi (cell 1): 0.732243
#> s (cell 1): 0.2593
#> nu (cell 1): 0.432642
#> theta (batch 1): 0.160092
#> betas:    1.2392  -0.2008   0.3004   0.6350   0.5251   0.5893   0.8974  -0.3063   0.2189  -0.0101   0.2115  -0.6006
#> 
#> sigma: 0.19299
#> lambda (gene 1): 0.892079
#> epsilon (gene 1): -0.5536
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 10400 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 877.046
#> delta (gene 1): 0.633715
#> phi (cell 1): 0.750319
#> s (cell 1): 0.717102
#> nu (cell 1): 0.439559
#> theta (batch 1): 0.166032
#> betas:    0.9582  -0.1669   0.8200   0.5709   0.9490   0.0895   0.7662   0.6452  -0.5063   0.1370   0.2533  -0.2999
#> 
#> sigma: 0.148278
#> lambda (gene 1): 0.980554
#> epsilon (gene 1): -0.380169
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 10420 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 647.727
#> delta (gene 1): 0.575807
#> phi (cell 1): 0.685566
#> s (cell 1): 0.276035
#> nu (cell 1): 0.429768
#> theta (batch 1): 0.185726
#> betas:    0.6663  -0.0109  -0.1859   0.7656   0.8309   0.2864   0.5149  -0.2792   0.0691  -0.5922  -0.1819  -0.5319
#> 
#> sigma: 0.146914
#> lambda (gene 1): 3.22976
#> epsilon (gene 1): -0.267143
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 10440 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 811.633
#> delta (gene 1): 0.656811
#> phi (cell 1): 0.707799
#> s (cell 1): 0.481622
#> nu (cell 1): 0.43858
#> theta (batch 1): 0.17729
#> betas:    1.0785  -0.1187   0.0475   1.0812   0.8677   0.2888   0.2159   0.1480   0.2747  -0.4838  -0.4556   0.2283
#> 
#> sigma: 0.124525
#> lambda (gene 1): 0.807635
#> epsilon (gene 1): -0.164576
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 10460 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 598.518
#> delta (gene 1): 0.788885
#> phi (cell 1): 0.636379
#> s (cell 1): 0.315741
#> nu (cell 1): 0.424818
#> theta (batch 1): 0.25958
#> betas:    0.9800  -0.0063   1.4070   0.3380   0.9688   0.0125   0.5300  -0.2773   0.2561  -0.6626  -0.6861  -0.4345
#> 
#> sigma: 0.186515
#> lambda (gene 1): 1.66455
#> epsilon (gene 1): 0.00819745
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 10480 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 703.613
#> delta (gene 1): 0.791803
#> phi (cell 1): 0.582917
#> s (cell 1): 0.519826
#> nu (cell 1): 0.417895
#> theta (batch 1): 0.104987
#> betas:    0.4849   0.0700   1.0043   0.8012   0.3282   0.4914   0.4302  -0.2008  -0.1535  -0.3275  -0.9000  -0.6189
#> 
#> sigma: 0.134828
#> lambda (gene 1): 1.72287
#> epsilon (gene 1): 0.134633
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 10500 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 815.771
#> delta (gene 1): 0.987252
#> phi (cell 1): 0.626645
#> s (cell 1): 0.926328
#> nu (cell 1): 0.422306
#> theta (batch 1): 0.178253
#> betas:    0.5766  -0.1144   0.7202   0.6414   0.8174   0.7318   0.2101   0.3105   0.3286  -0.4617   0.2090  -0.1534
#> 
#> sigma: 0.179902
#> lambda (gene 1): 1.33502
#> epsilon (gene 1): 0.228466
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 10520 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 746.646
#> delta (gene 1): 0.636731
#> phi (cell 1): 0.631146
#> s (cell 1): 0.408906
#> nu (cell 1): 0.422959
#> theta (batch 1): 0.370573
#> betas:    0.5317   0.0049   0.8689   0.6392   1.1597   0.4370  -0.0412   0.5357  -0.1280  -0.4264  -0.6556  -0.3770
#> 
#> sigma: 0.17201
#> lambda (gene 1): 0.227687
#> epsilon (gene 1): -0.0114955
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 10540 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 730.062
#> delta (gene 1): 0.983371
#> phi (cell 1): 0.662058
#> s (cell 1): 0.667473
#> nu (cell 1): 0.41961
#> theta (batch 1): 0.423574
#> betas:    1.0748  -0.2260   0.3324   1.0201   1.0160   0.5672   0.4847   0.1267   0.2070   0.3290  -0.4833   0.2934
#> 
#> sigma: 0.142173
#> lambda (gene 1): 0.622716
#> epsilon (gene 1): 0.188113
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 10560 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 607.751
#> delta (gene 1): 0.725706
#> phi (cell 1): 0.68076
#> s (cell 1): 0.354002
#> nu (cell 1): 0.411307
#> theta (batch 1): 0.518119
#> betas:    0.9865  -0.0882  -0.0982   0.6051   0.9791   0.5620   0.0732  -0.0122   0.1445  -0.4582  -0.5084  -0.1329
#> 
#> sigma: 0.152889
#> lambda (gene 1): 1.05949
#> epsilon (gene 1): 0.0672078
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 10580 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 895.723
#> delta (gene 1): 0.625766
#> phi (cell 1): 0.763142
#> s (cell 1): 0.488965
#> nu (cell 1): 0.420763
#> theta (batch 1): 0.622666
#> betas:    0.5288  -0.0405   0.0844   1.1473   0.7487   0.8259   0.1683   0.0240   0.1071  -0.1865  -0.1692  -0.6638
#> 
#> sigma: 0.159945
#> lambda (gene 1): 0.730223
#> epsilon (gene 1): -0.30262
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 10600 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 603.103
#> delta (gene 1): 0.526965
#> phi (cell 1): 0.745206
#> s (cell 1): 0.793521
#> nu (cell 1): 0.434301
#> theta (batch 1): 0.350357
#> betas:    1.3097  -0.0814   0.5287   0.5157   0.4546   0.4446  -0.2279   0.3100  -0.1085  -0.5926  -0.3863  -0.5433
#> 
#> sigma: 0.140139
#> lambda (gene 1): 0.880709
#> epsilon (gene 1): -0.354509
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 10620 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 758.046
#> delta (gene 1): 0.608296
#> phi (cell 1): 0.752168
#> s (cell 1): 0.628211
#> nu (cell 1): 0.42817
#> theta (batch 1): 0.330483
#> betas:    0.6911  -0.1900   0.7766   1.0808   0.5740   0.8490   0.6457   0.4074  -0.0008  -0.0797   0.2039   0.3054
#> 
#> sigma: 0.177732
#> lambda (gene 1): 1.18622
#> epsilon (gene 1): -0.199334
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 10640 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 550.867
#> delta (gene 1): 0.592218
#> phi (cell 1): 0.740697
#> s (cell 1): 0.461015
#> nu (cell 1): 0.426738
#> theta (batch 1): 0.157299
#> betas:    0.6988  -0.0343   0.4929   0.9048   1.0333   0.0363   0.6735  -0.0965   0.2750  -0.4523  -0.2916  -0.5855
#> 
#> sigma: 0.1578
#> lambda (gene 1): 0.45543
#> epsilon (gene 1): -0.332177
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 10660 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 712.299
#> delta (gene 1): 0.497912
#> phi (cell 1): 0.616434
#> s (cell 1): 0.476399
#> nu (cell 1): 0.431701
#> theta (batch 1): 0.230578
#> betas:    0.9302  -0.0238   0.5442   0.7843   0.8090   0.0177   0.4430  -0.0468  -0.2804  -0.1841  -0.3223  -0.8116
#> 
#> sigma: 0.120899
#> lambda (gene 1): 0.625435
#> epsilon (gene 1): -0.627273
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 10680 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 709.615
#> delta (gene 1): 0.672814
#> phi (cell 1): 0.632656
#> s (cell 1): 0.35415
#> nu (cell 1): 0.416077
#> theta (batch 1): 0.127587
#> betas:    0.4016  -0.0470   1.0332   0.5780   0.8971   1.0731  -0.4569   0.7406   0.1397  -0.4347  -0.2619  -0.0509
#> 
#> sigma: 0.200125
#> lambda (gene 1): 1.07794
#> epsilon (gene 1): -0.0725372
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 10700 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 589.115
#> delta (gene 1): 0.4707
#> phi (cell 1): 0.636801
#> s (cell 1): 0.45681
#> nu (cell 1): 0.433302
#> theta (batch 1): 0.074994
#> betas:    0.9626  -0.0443   1.0581   0.5478   0.3481   0.2601   0.7141  -0.0206  -0.7670   0.2395  -0.6353  -0.3987
#> 
#> sigma: 0.166991
#> lambda (gene 1): 0.296881
#> epsilon (gene 1): -0.582291
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 10720 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 767.205
#> delta (gene 1): 0.669876
#> phi (cell 1): 0.64223
#> s (cell 1): 0.890197
#> nu (cell 1): 0.421376
#> theta (batch 1): 0.196308
#> betas:    0.9394  -0.1192   0.4066   0.9774   0.7086   0.5959  -0.0103   0.3746  -0.1348   0.1789  -0.2646  -0.4744
#> 
#> sigma: 0.226329
#> lambda (gene 1): 0.839527
#> epsilon (gene 1): -0.377549
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 10740 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 639.501
#> delta (gene 1): 0.695264
#> phi (cell 1): 0.673476
#> s (cell 1): 1.36824
#> nu (cell 1): 0.430909
#> theta (batch 1): 0.39644
#> betas:    1.0356  -0.1028   0.4668   0.6839   0.5417   0.4327   0.6424  -0.3519   0.3247  -0.7046   0.0859  -0.5326
#> 
#> sigma: 0.220448
#> lambda (gene 1): 0.732264
#> epsilon (gene 1): -0.0837071
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 10760 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 710.546
#> delta (gene 1): 0.690023
#> phi (cell 1): 0.731124
#> s (cell 1): 1.48537
#> nu (cell 1): 0.432252
#> theta (batch 1): 0.165124
#> betas:    0.8286  -0.1072   0.3980   0.8342   0.8480   0.2589   0.4041   0.3319  -0.2922   0.4580  -0.6953  -0.0491
#> 
#> sigma: 0.164188
#> lambda (gene 1): 0.325482
#> epsilon (gene 1): -0.293063
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 10780 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 630.102
#> delta (gene 1): 0.659101
#> phi (cell 1): 0.540395
#> s (cell 1): 0.640474
#> nu (cell 1): 0.413759
#> theta (batch 1): 0.290302
#> betas:    1.0035  -0.1342   0.6679   0.4373   0.8282   0.3666   0.6698  -0.1722   0.3288  -0.4012  -0.1601  -0.0856
#> 
#> sigma: 0.150883
#> lambda (gene 1): 0.904323
#> epsilon (gene 1): -0.182242
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 10800 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 730.829
#> delta (gene 1): 0.706526
#> phi (cell 1): 0.547993
#> s (cell 1): 0.441051
#> nu (cell 1): 0.425233
#> theta (batch 1): 0.074919
#> betas:    0.6324  -0.0720   0.0925   1.3242   0.6539   0.6260   0.2551  -0.0847   0.1724  -0.0250  -0.6386   0.0851
#> 
#> sigma: 0.146842
#> lambda (gene 1): 2.23651
#> epsilon (gene 1): -0.117978
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 10820 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 612.716
#> delta (gene 1): 0.48078
#> phi (cell 1): 0.613056
#> s (cell 1): 0.677964
#> nu (cell 1): 0.409379
#> theta (batch 1): 0.133786
#> betas:    1.1679  -0.0495   0.3915   0.3521   0.6051   0.2776   0.0717   0.4911  -0.6075  -0.5074  -0.1066  -0.9544
#> 
#> sigma: 0.155651
#> lambda (gene 1): 1.5859
#> epsilon (gene 1): -0.418995
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 10840 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 543.628
#> delta (gene 1): 0.909219
#> phi (cell 1): 0.713724
#> s (cell 1): 0.781137
#> nu (cell 1): 0.426118
#> theta (batch 1): 0.215684
#> betas:    0.7785  -0.0643   0.7847   0.6919   0.6999   0.3528   0.4127   0.1266  -0.3755   0.1692  -0.5937  -0.2120
#> 
#> sigma: 0.159437
#> lambda (gene 1): 0.823669
#> epsilon (gene 1): 0.101743
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 10860 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 605.938
#> delta (gene 1): 1.33519
#> phi (cell 1): 0.698228
#> s (cell 1): 0.368648
#> nu (cell 1): 0.434273
#> theta (batch 1): 0.0387149
#> betas:    0.7865  -0.0176   0.4843   0.7964   0.3869   0.7990  -0.0688   0.3054  -0.5870   0.2099  -0.7212  -0.5835
#> 
#> sigma: 0.137406
#> lambda (gene 1): 0.901998
#> epsilon (gene 1): 0.447123
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 10880 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 693.475
#> delta (gene 1): 0.546524
#> phi (cell 1): 0.731285
#> s (cell 1): 1.26522
#> nu (cell 1): 0.424898
#> theta (batch 1): 0.120353
#> betas:    0.5212  -0.0560   0.9434   1.0502   0.5002   0.6482   0.5751  -0.3045   0.6282  -0.4560  -0.4266   0.1244
#> 
#> sigma: 0.111814
#> lambda (gene 1): 1.73749
#> epsilon (gene 1): -0.374332
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 10900 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 654.535
#> delta (gene 1): 0.66824
#> phi (cell 1): 0.682191
#> s (cell 1): 0.350378
#> nu (cell 1): 0.418136
#> theta (batch 1): 0.0436028
#> betas:    0.7583  -0.0084   0.5640   0.2741   1.0107   0.4037   0.1986   0.0396   0.1992  -0.6741  -0.0793  -0.5303
#> 
#> sigma: 0.163876
#> lambda (gene 1): 1.04797
#> epsilon (gene 1): -0.365161
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 10920 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 647.227
#> delta (gene 1): 0.581217
#> phi (cell 1): 0.675853
#> s (cell 1): 0.484948
#> nu (cell 1): 0.415091
#> theta (batch 1): 0.0211111
#> betas:    1.2162  -0.1671   0.7602   0.5084   0.7953  -0.2758   0.6387   0.2342  -0.4147   0.2364  -0.4592   0.2581
#> 
#> sigma: 0.142854
#> lambda (gene 1): 0.724029
#> epsilon (gene 1): -0.409256
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 10940 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 822.822
#> delta (gene 1): 0.737138
#> phi (cell 1): 0.600741
#> s (cell 1): 0.409275
#> nu (cell 1): 0.431397
#> theta (batch 1): 0.00348931
#> betas:    1.0007   0.0400   0.4862   0.4101   0.6113   0.3604   0.0886  -0.1385  -0.3766  -0.5485  -0.7903  -0.5655
#> 
#> sigma: 0.176369
#> lambda (gene 1): 0.745895
#> epsilon (gene 1): 0.0115438
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 10960 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 767.512
#> delta (gene 1): 0.537773
#> phi (cell 1): 0.670922
#> s (cell 1): 0.513756
#> nu (cell 1): 0.412993
#> theta (batch 1): 0.021896
#> betas:    1.3074  -0.2185   0.3993   1.1849   0.1447   0.6069   0.6406   0.0141   0.0016   0.0930  -0.5180   0.3387
#> 
#> sigma: 0.138187
#> lambda (gene 1): 1.52773
#> epsilon (gene 1): -0.29761
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 10980 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 751.235
#> delta (gene 1): 0.902502
#> phi (cell 1): 0.699374
#> s (cell 1): 0.312738
#> nu (cell 1): 0.426432
#> theta (batch 1): 0.0767168
#> betas:    0.7781  -0.1329   0.4315   0.9746   0.7992   0.6293  -0.0041   0.5043   0.2666  -0.1691  -0.4053   0.0467
#> 
#> sigma: 0.154355
#> lambda (gene 1): 1.91257
#> epsilon (gene 1): 0.186527
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 11000 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 812.146
#> delta (gene 1): 0.519361
#> phi (cell 1): 0.682134
#> s (cell 1): 0.535508
#> nu (cell 1): 0.412947
#> theta (batch 1): 0.10337
#> betas:    0.7408  -0.0009   0.8708   0.7747   0.7855   0.4800   0.2729   0.1030  -0.3129  -0.2877  -0.6147  -0.5257
#> 
#> sigma: 0.124658
#> lambda (gene 1): 0.126729
#> epsilon (gene 1): -0.311084
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 11020 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 606.488
#> delta (gene 1): 0.584115
#> phi (cell 1): 0.649902
#> s (cell 1): 0.463059
#> nu (cell 1): 0.432211
#> theta (batch 1): 0.0163583
#> betas:    0.3657  -0.0071   0.9291   0.6845   0.3348   1.1811  -0.1600   0.3835   0.0269  -0.4036  -0.0244  -0.4674
#> 
#> sigma: 0.168687
#> lambda (gene 1): 1.33293
#> epsilon (gene 1): -0.395458
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 11040 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 895.583
#> delta (gene 1): 0.701365
#> phi (cell 1): 0.687602
#> s (cell 1): 0.402428
#> nu (cell 1): 0.434356
#> theta (batch 1): 0.0604399
#> betas:    1.2991  -0.1579   0.5226   0.7460   0.5984   0.8461   0.0897  -0.0653   0.1471  -0.3101   0.0775  -0.4960
#> 
#> sigma: 0.189002
#> lambda (gene 1): 0.696268
#> epsilon (gene 1): -0.295677
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 11060 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 791.744
#> delta (gene 1): 0.699853
#> phi (cell 1): 0.703045
#> s (cell 1): 0.518305
#> nu (cell 1): 0.421485
#> theta (batch 1): 0.0719556
#> betas:    1.0192  -0.1496   0.7388   0.7260   0.3827   0.8269   0.2368   0.2170   0.1011  -0.0374  -0.6469   0.3628
#> 
#> sigma: 0.153904
#> lambda (gene 1): 0.5866
#> epsilon (gene 1): -0.0780081
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 11080 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 733.501
#> delta (gene 1): 0.846938
#> phi (cell 1): 0.843012
#> s (cell 1): 0.44368
#> nu (cell 1): 0.424456
#> theta (batch 1): 0.244388
#> betas:    1.3497  -0.1624  -0.8072   0.9164   0.9465   0.1205   0.2235   0.3657  -0.2167  -0.1871  -0.0193  -0.5520
#> 
#> sigma: 0.216036
#> lambda (gene 1): 2.15258
#> epsilon (gene 1): -0.0178038
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 11100 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 743.36
#> delta (gene 1): 0.964953
#> phi (cell 1): 0.735006
#> s (cell 1): 0.57156
#> nu (cell 1): 0.417938
#> theta (batch 1): 0.194573
#> betas:    0.9326  -0.1382   0.8074   0.6446   0.6352   0.7213   0.5315  -0.0904   0.1360  -0.1212  -0.2448   0.1348
#> 
#> sigma: 0.118135
#> lambda (gene 1): 1.18983
#> epsilon (gene 1): 0.129877
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 11120 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 721.936
#> delta (gene 1): 0.708673
#> phi (cell 1): 0.73813
#> s (cell 1): 0.548949
#> nu (cell 1): 0.419975
#> theta (batch 1): 0.378802
#> betas:    1.4862  -0.1425   0.7189   1.3187  -0.0277   0.2675   0.6417  -0.2712  -0.1637  -0.1946  -0.1703  -0.8855
#> 
#> sigma: 0.197811
#> lambda (gene 1): 2.08899
#> epsilon (gene 1): -0.159633
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 11140 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 597.284
#> delta (gene 1): 0.971562
#> phi (cell 1): 0.779863
#> s (cell 1): 0.346244
#> nu (cell 1): 0.425835
#> theta (batch 1): 0.206203
#> betas:    0.8897  -0.1449   0.8697   0.5604   0.1015   0.8865   0.4417   0.1086   0.1231  -0.1986   0.0345  -0.1034
#> 
#> sigma: 0.138265
#> lambda (gene 1): 1.76149
#> epsilon (gene 1): 0.126723
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 11160 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 832.105
#> delta (gene 1): 0.615407
#> phi (cell 1): 0.773143
#> s (cell 1): 0.465731
#> nu (cell 1): 0.420359
#> theta (batch 1): 0.123049
#> betas:    1.0680  -0.1034   0.3584   0.7696   0.4502   0.6500   0.0918  -0.1109   0.5353  -0.4715  -0.6833   0.3162
#> 
#> sigma: 0.219547
#> lambda (gene 1): 0.168158
#> epsilon (gene 1): -0.296308
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 11180 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 568.541
#> delta (gene 1): 0.594663
#> phi (cell 1): 0.787318
#> s (cell 1): 0.55386
#> nu (cell 1): 0.405618
#> theta (batch 1): 0.0488363
#> betas:    0.4637  -0.0917   0.7150   1.1219   1.1487   0.1875   0.7129   0.0031   0.1276   0.0236   0.2339  -0.6085
#> 
#> sigma: 0.186003
#> lambda (gene 1): 0.2475
#> epsilon (gene 1): -0.505873
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 11200 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 661.92
#> delta (gene 1): 0.591767
#> phi (cell 1): 0.734238
#> s (cell 1): 0.346933
#> nu (cell 1): 0.432076
#> theta (batch 1): 0.0147485
#> betas:    1.0191  -0.1229   0.1172   1.1006   0.7040   0.7189  -0.1058   0.2664  -0.0111   0.1224  -0.6703   0.2119
#> 
#> sigma: 0.172692
#> lambda (gene 1): 0.749614
#> epsilon (gene 1): -0.445934
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 11220 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 821.125
#> delta (gene 1): 0.619685
#> phi (cell 1): 0.691581
#> s (cell 1): 0.575665
#> nu (cell 1): 0.43067
#> theta (batch 1): 0.131356
#> betas:    0.5004  -0.0094   0.8888   1.0431   0.0496   0.7289   0.5860   0.0606  -0.5872   0.5289  -1.0842  -0.0763
#> 
#> sigma: 0.156703
#> lambda (gene 1): 0.978823
#> epsilon (gene 1): -0.247756
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 11240 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 642.93
#> delta (gene 1): 0.605869
#> phi (cell 1): 0.716313
#> s (cell 1): 0.529632
#> nu (cell 1): 0.425318
#> theta (batch 1): 0.327211
#> betas:    0.7318  -0.1968   1.0505   0.4014   0.9186   0.5587   0.3273   0.4002   0.3711   0.4549  -0.5456   0.4850
#> 
#> sigma: 0.158438
#> lambda (gene 1): 0.35691
#> epsilon (gene 1): -0.439557
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 11260 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 753.014
#> delta (gene 1): 0.651256
#> phi (cell 1): 0.830301
#> s (cell 1): 0.744447
#> nu (cell 1): 0.415239
#> theta (batch 1): 0.241309
#> betas:    0.9704  -0.1925   0.6566   0.9843   0.6472   0.3823   0.7428  -0.0042   0.1032   0.0605  -0.2718   0.3574
#> 
#> sigma: 0.18155
#> lambda (gene 1): 1.24869
#> epsilon (gene 1): -0.167908
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 11280 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 551.112
#> delta (gene 1): 0.547434
#> phi (cell 1): 0.896931
#> s (cell 1): 1.09807
#> nu (cell 1): 0.420361
#> theta (batch 1): 0.373086
#> betas:    0.8249  -0.1382   0.5189   0.7814   0.5278   0.6024   0.6142  -0.1485  -0.0910   0.2571  -0.4589   0.1921
#> 
#> sigma: 0.19922
#> lambda (gene 1): 1.18328
#> epsilon (gene 1): -0.402547
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 11300 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 677.941
#> delta (gene 1): 0.925187
#> phi (cell 1): 0.82377
#> s (cell 1): 0.76659
#> nu (cell 1): 0.425607
#> theta (batch 1): 0.369756
#> betas:    1.0290  -0.1189   0.4851   0.9417   0.3321   0.8603  -0.0428   0.1958   0.4403  -0.2604  -0.7575   0.2317
#> 
#> sigma: 0.165686
#> lambda (gene 1): 1.33794
#> epsilon (gene 1): 0.125583
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 11320 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 584.523
#> delta (gene 1): 0.847212
#> phi (cell 1): 0.779523
#> s (cell 1): 0.499277
#> nu (cell 1): 0.43522
#> theta (batch 1): 0.260518
#> betas:    1.1786  -0.1398   0.4186   0.3820   0.8515   0.0214   0.5671   0.4374  -0.5835   0.0586  -0.2076  -0.1784
#> 
#> sigma: 0.190182
#> lambda (gene 1): 0.45603
#> epsilon (gene 1): 0.00413914
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 11340 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 615.857
#> delta (gene 1): 0.71251
#> phi (cell 1): 0.709899
#> s (cell 1): 0.405576
#> nu (cell 1): 0.430124
#> theta (batch 1): 0.226081
#> betas:    1.3777  -0.0015   0.7757   0.5068   0.6219   0.0086   0.1951  -0.3717  -0.1817  -0.2413  -1.1430  -0.6159
#> 
#> sigma: 0.135823
#> lambda (gene 1): 0.742123
#> epsilon (gene 1): -0.22537
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 11360 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 701.545
#> delta (gene 1): 0.664423
#> phi (cell 1): 0.734138
#> s (cell 1): 0.511083
#> nu (cell 1): 0.425004
#> theta (batch 1): 0.229788
#> betas:    1.3151  -0.2309   0.3029   0.8384   0.5088   0.8119   0.3173  -0.1533   0.4592  -0.0091  -0.3327   0.1372
#> 
#> sigma: 0.147346
#> lambda (gene 1): 3.51505
#> epsilon (gene 1): -0.243696
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 11380 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 655.128
#> delta (gene 1): 0.957524
#> phi (cell 1): 0.679813
#> s (cell 1): 0.403546
#> nu (cell 1): 0.409406
#> theta (batch 1): 0.268415
#> betas:    0.6891  -0.1027   1.1842   0.0766   0.8596   0.9329   0.4123   0.1493  -0.0202   0.2121  -0.3108  -0.3890
#> 
#> sigma: 0.19818
#> lambda (gene 1): 0.751749
#> epsilon (gene 1): 0.0552077
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 11400 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 750.189
#> delta (gene 1): 0.465231
#> phi (cell 1): 0.691885
#> s (cell 1): 0.466868
#> nu (cell 1): 0.406835
#> theta (batch 1): 0.166709
#> betas:    0.6429  -0.0047   0.9277   0.6096   0.6314   0.8730   0.0406   0.0999  -0.2052  -0.2038  -0.4613  -0.4554
#> 
#> sigma: 0.125668
#> lambda (gene 1): 0.694529
#> epsilon (gene 1): -0.581333
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 11420 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 933.067
#> delta (gene 1): 0.654091
#> phi (cell 1): 0.651739
#> s (cell 1): 0.522952
#> nu (cell 1): 0.405427
#> theta (batch 1): 0.142302
#> betas:    0.9699  -0.2103   1.3670   0.3964   0.7386   0.4740   0.5716  -0.0188   0.4461  -0.3930   0.4746  -0.2926
#> 
#> sigma: 0.159691
#> lambda (gene 1): 0.38688
#> epsilon (gene 1): -0.186834
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 11440 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 623.928
#> delta (gene 1): 0.759287
#> phi (cell 1): 0.621703
#> s (cell 1): 0.325195
#> nu (cell 1): 0.413139
#> theta (batch 1): 0.073554
#> betas:    0.8100   0.0152   0.7915   1.0229   0.3474   0.5197   0.3150  -0.1048  -0.1225  -0.4153  -0.8627  -0.3704
#> 
#> sigma: 0.136479
#> lambda (gene 1): 0.627302
#> epsilon (gene 1): 0.0818124
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 11460 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 704.015
#> delta (gene 1): 0.612437
#> phi (cell 1): 0.663294
#> s (cell 1): 0.48163
#> nu (cell 1): 0.414047
#> theta (batch 1): 0.024214
#> betas:    1.0593  -0.0841   0.7137   0.6350   0.8576   0.3290   0.2913  -0.0255  -0.0343  -0.2987  -0.2651  -0.7640
#> 
#> sigma: 0.171443
#> lambda (gene 1): 1.00944
#> epsilon (gene 1): -0.251119
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 11480 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 540.3
#> delta (gene 1): 0.572138
#> phi (cell 1): 0.72685
#> s (cell 1): 0.330647
#> nu (cell 1): 0.438244
#> theta (batch 1): 0.0177877
#> betas:    1.3264  -0.0884   0.6879   0.5139   0.0775   0.3515   0.5247  -0.4876  -0.0075  -0.1004  -0.7895  -0.4636
#> 
#> sigma: 0.179416
#> lambda (gene 1): 0.871929
#> epsilon (gene 1): -0.370499
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 11500 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 843.044
#> delta (gene 1): 0.737537
#> phi (cell 1): 0.721312
#> s (cell 1): 0.417875
#> nu (cell 1): 0.425244
#> theta (batch 1): 0.0315364
#> betas:    1.0248  -0.0705   0.5951   1.2219   0.1830   0.5175   0.2648   0.2162  -0.2675  -0.4884  -0.3730  -0.4075
#> 
#> sigma: 0.166869
#> lambda (gene 1): 1.3274
#> epsilon (gene 1): 0.146884
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 11520 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 675.739
#> delta (gene 1): 0.87517
#> phi (cell 1): 0.649152
#> s (cell 1): 0.578951
#> nu (cell 1): 0.427094
#> theta (batch 1): 0.162876
#> betas:    0.9758  -0.1420   0.6773   1.0811   0.5814   0.2477   0.6915  -0.3476   0.6858  -0.1194  -0.5802   0.2643
#> 
#> sigma: 0.196483
#> lambda (gene 1): 1.36652
#> epsilon (gene 1): -0.0757794
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 11540 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 735.502
#> delta (gene 1): 0.756056
#> phi (cell 1): 0.708538
#> s (cell 1): 0.419288
#> nu (cell 1): 0.420385
#> theta (batch 1): 0.105953
#> betas:    0.8571  -0.1257   0.4512   0.6793   0.6980   0.4664   0.4429   0.4122  -0.3655   0.1194   0.1064  -0.4714
#> 
#> sigma: 0.156516
#> lambda (gene 1): 1.31521
#> epsilon (gene 1): -0.22919
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 11560 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 519.132
#> delta (gene 1): 1.12226
#> phi (cell 1): 0.651102
#> s (cell 1): 0.544342
#> nu (cell 1): 0.424576
#> theta (batch 1): 0.0448283
#> betas:    0.7382   0.0021   1.2714   0.3009   0.6658   0.3027   0.6195  -0.3411   0.3218  -0.3438  -0.8011  -0.2293
#> 
#> sigma: 0.156176
#> lambda (gene 1): 1.29491
#> epsilon (gene 1): 0.224052
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 11580 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 542.38
#> delta (gene 1): 0.615602
#> phi (cell 1): 0.552977
#> s (cell 1): 0.173797
#> nu (cell 1): 0.427228
#> theta (batch 1): 0.543285
#> betas:    0.9882  -0.0944   0.4710   0.5824   0.5557   0.7581   0.3116   0.1806  -0.1763  -0.0792  -0.2706  -0.5107
#> 
#> sigma: 0.129769
#> lambda (gene 1): 0.820365
#> epsilon (gene 1): -0.347522
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 11600 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 654.191
#> delta (gene 1): 0.713211
#> phi (cell 1): 0.6494
#> s (cell 1): 1.2313
#> nu (cell 1): 0.431185
#> theta (batch 1): 0.247327
#> betas:    0.7727  -0.0816   0.3238   0.8358   0.8149   0.9958  -0.1139   0.2854   0.3830  -0.5167  -0.1868  -0.3673
#> 
#> sigma: 0.154399
#> lambda (gene 1): 1.1219
#> epsilon (gene 1): -0.111324
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 11620 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 622.489
#> delta (gene 1): 0.624246
#> phi (cell 1): 0.707974
#> s (cell 1): 0.582799
#> nu (cell 1): 0.413236
#> theta (batch 1): 0.460936
#> betas:    0.2680  -0.0574   0.7174   0.7578   1.0779   0.5329   0.4995   0.1703   0.4570  -0.2158  -0.3824   0.0997
#> 
#> sigma: 0.138703
#> lambda (gene 1): 2.0646
#> epsilon (gene 1): -0.230863
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 11640 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 667.133
#> delta (gene 1): 0.575407
#> phi (cell 1): 0.734488
#> s (cell 1): 0.422351
#> nu (cell 1): 0.430807
#> theta (batch 1): 0.316906
#> betas:    0.7864   0.0574   0.8410   0.7200   0.8715  -0.0558   0.3692  -0.3116  -0.2280  -0.3815  -0.6021  -1.0359
#> 
#> sigma: 0.181341
#> lambda (gene 1): 2.53097
#> epsilon (gene 1): -0.378993
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 11660 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 730.246
#> delta (gene 1): 0.712637
#> phi (cell 1): 0.78567
#> s (cell 1): 0.353413
#> nu (cell 1): 0.435543
#> theta (batch 1): 0.228821
#> betas:    0.6778  -0.0465   0.3317   0.9880   0.6589   0.5456   0.5389   0.0866  -0.0147  -0.3067  -0.1460  -0.5753
#> 
#> sigma: 0.121905
#> lambda (gene 1): 1.38661
#> epsilon (gene 1): -0.151717
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 11680 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 730.465
#> delta (gene 1): 0.569111
#> phi (cell 1): 0.663532
#> s (cell 1): 0.546418
#> nu (cell 1): 0.415108
#> theta (batch 1): 0.112224
#> betas:    0.9100  -0.0193   1.1331  -0.2316   1.0656   0.5645  -0.2572   0.4340  -0.2027  -1.0127   0.0330  -0.6815
#> 
#> sigma: 0.187146
#> lambda (gene 1): 0.478577
#> epsilon (gene 1): -0.116352
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 11700 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 605.049
#> delta (gene 1): 0.980757
#> phi (cell 1): 0.680836
#> s (cell 1): 0.351992
#> nu (cell 1): 0.419346
#> theta (batch 1): 0.0491752
#> betas:    0.8095  -0.1193   0.4466   0.8176   0.6062   0.7097   0.4419   0.2491  -0.0039  -0.3624  -0.0553  -0.2478
#> 
#> sigma: 0.140488
#> lambda (gene 1): 0.439329
#> epsilon (gene 1): 0.372915
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 11720 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 573.939
#> delta (gene 1): 1.00913
#> phi (cell 1): 0.85944
#> s (cell 1): 0.466545
#> nu (cell 1): 0.413322
#> theta (batch 1): 0.0205696
#> betas:    0.6790  -0.1759   0.6931   1.0477   0.6860   0.8664   0.6177  -0.0984   0.3470   0.0251   0.2148  -0.0330
#> 
#> sigma: 0.132091
#> lambda (gene 1): 0.90818
#> epsilon (gene 1): 0.0933348
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 11740 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 730.341
#> delta (gene 1): 0.646781
#> phi (cell 1): 0.804052
#> s (cell 1): 0.424334
#> nu (cell 1): 0.415304
#> theta (batch 1): 0.040783
#> betas:    0.1125  -0.0278   1.3598   1.0499   0.9249   0.3810   0.4563   0.2159   0.3360  -0.3233  -0.2189  -0.0284
#> 
#> sigma: 0.144701
#> lambda (gene 1): 0.46462
#> epsilon (gene 1): -0.146844
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 11760 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 611.219
#> delta (gene 1): 0.701986
#> phi (cell 1): 0.726078
#> s (cell 1): 0.459638
#> nu (cell 1): 0.417217
#> theta (batch 1): 0.0134739
#> betas:    0.3677   0.0421   1.0254   0.8296   0.9327   0.4157   0.0856   0.3153  -0.1116  -0.5199  -0.1381  -0.9148
#> 
#> sigma: 0.172586
#> lambda (gene 1): 1.19661
#> epsilon (gene 1): -0.110201
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 11780 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 773.554
#> delta (gene 1): 0.474654
#> phi (cell 1): 0.751152
#> s (cell 1): 0.435815
#> nu (cell 1): 0.427903
#> theta (batch 1): 0.00899034
#> betas:    1.4783  -0.3578   0.4726   0.5772   0.8893   0.3768   0.2525   0.7235   0.1368   0.4236  -0.2613   0.8419
#> 
#> sigma: 0.176208
#> lambda (gene 1): 0.25754
#> epsilon (gene 1): -0.561918
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 11800 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 681.304
#> delta (gene 1): 0.794059
#> phi (cell 1): 0.692305
#> s (cell 1): 0.430264
#> nu (cell 1): 0.424637
#> theta (batch 1): 0.018722
#> betas:    0.5466   0.0980   0.5959  -0.1685   1.6167   0.0292   0.4094  -0.2973  -0.0353  -0.7348  -0.3804  -1.0105
#> 
#> sigma: 0.184296
#> lambda (gene 1): 3.09806
#> epsilon (gene 1): -0.041602
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 11820 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 707.02
#> delta (gene 1): 0.946245
#> phi (cell 1): 0.69751
#> s (cell 1): 0.585266
#> nu (cell 1): 0.414185
#> theta (batch 1): 0.0301935
#> betas:    0.3147  -0.0823   1.1800   0.6025   0.5698   1.1244   0.3541   0.2857   0.4854  -0.2209  -0.3562   0.1634
#> 
#> sigma: 0.159137
#> lambda (gene 1): 0.927656
#> epsilon (gene 1): 0.231016
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 11840 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 767.086
#> delta (gene 1): 0.955166
#> phi (cell 1): 0.73068
#> s (cell 1): 0.450364
#> nu (cell 1): 0.435965
#> theta (batch 1): 0.0797948
#> betas:    1.2743  -0.1568   0.7369   0.5884   0.3968   0.8630  -0.0236   0.1722   0.2905  -0.7557   0.1865  -0.3873
#> 
#> sigma: 0.164926
#> lambda (gene 1): 1.19902
#> epsilon (gene 1): 0.219922
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 11860 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 770.982
#> delta (gene 1): 0.566931
#> phi (cell 1): 0.779359
#> s (cell 1): 0.3297
#> nu (cell 1): 0.416212
#> theta (batch 1): 0.0517453
#> betas:    0.4922   0.1452   1.1731   0.6493  -0.0222   0.6292   0.4762  -0.0756  -0.1782  -1.0040  -0.3391  -1.1414
#> 
#> sigma: 0.190226
#> lambda (gene 1): 1.01452
#> epsilon (gene 1): -0.321164
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 11880 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 612.989
#> delta (gene 1): 0.642681
#> phi (cell 1): 0.890432
#> s (cell 1): 0.728485
#> nu (cell 1): 0.421076
#> theta (batch 1): 0.146937
#> betas:   -0.2076  -0.0618   0.5368   1.4467   0.9830   0.6338   0.8149   0.3357   0.5993  -0.1014   0.3651  -0.6334
#> 
#> sigma: 0.184031
#> lambda (gene 1): 1.52228
#> epsilon (gene 1): -0.305393
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 11900 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 742.416
#> delta (gene 1): 0.544518
#> phi (cell 1): 0.743142
#> s (cell 1): 0.503569
#> nu (cell 1): 0.423008
#> theta (batch 1): 0.0299467
#> betas:    0.4211   0.0481   1.0287   1.0985   0.3783   0.4157   0.2646   0.7215  -0.7245  -0.3196  -0.3282  -0.2862
#> 
#> sigma: 0.188299
#> lambda (gene 1): 0.682462
#> epsilon (gene 1): -0.389599
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 11920 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 642.052
#> delta (gene 1): 0.802123
#> phi (cell 1): 0.794029
#> s (cell 1): 0.478099
#> nu (cell 1): 0.435557
#> theta (batch 1): 0.11731
#> betas:    0.9365  -0.1704   0.0856   1.0625   0.6269   0.3000   1.0439  -0.1644   0.0244   0.0138   0.2020  -0.3445
#> 
#> sigma: 0.115568
#> lambda (gene 1): 0.419096
#> epsilon (gene 1): -0.108032
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 11940 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 706.008
#> delta (gene 1): 0.708699
#> phi (cell 1): 0.885749
#> s (cell 1): 0.435446
#> nu (cell 1): 0.40605
#> theta (batch 1): 0.0175975
#> betas:    0.9108  -0.0572   0.9696   0.4181   0.5407   0.8039  -0.0255   0.1814  -0.1214  -0.2490  -0.3142  -0.5157
#> 
#> sigma: 0.129938
#> lambda (gene 1): 0.915277
#> epsilon (gene 1): -0.197912
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 11960 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 700.245
#> delta (gene 1): 0.895379
#> phi (cell 1): 0.849639
#> s (cell 1): 0.352141
#> nu (cell 1): 0.420775
#> theta (batch 1): 0.02274
#> betas:    1.4235  -0.2190  -0.1469   0.5273   1.2219  -0.0823   0.6612   0.0331  -0.3729   0.1835  -0.2622  -0.1111
#> 
#> sigma: 0.161441
#> lambda (gene 1): 0.808317
#> epsilon (gene 1): 0.185566
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 11980 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 750.705
#> delta (gene 1): 0.697322
#> phi (cell 1): 0.818165
#> s (cell 1): 0.477976
#> nu (cell 1): 0.425486
#> theta (batch 1): 0.0107537
#> betas:    0.8785  -0.1182   0.9229   0.3107   1.1086   0.4135   0.2460   0.2956   0.2790  -0.2510  -0.2506  -0.1226
#> 
#> sigma: 0.12295
#> lambda (gene 1): 0.799655
#> epsilon (gene 1): -0.228628
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 12000 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 583.919
#> delta (gene 1): 0.707409
#> phi (cell 1): 0.77054
#> s (cell 1): 0.37752
#> nu (cell 1): 0.431503
#> theta (batch 1): 0.0818308
#> betas:    1.2102  -0.0996   1.1809   0.2526   0.2711   1.1408  -0.8327   0.6171  -0.2498  -0.0656  -0.6457   0.0394
#> 
#> sigma: 0.228903
#> lambda (gene 1): 2.15271
#> epsilon (gene 1): -0.290458
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 12020 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 522.656
#> delta (gene 1): 1.07199
#> phi (cell 1): 0.685846
#> s (cell 1): 0.377009
#> nu (cell 1): 0.411799
#> theta (batch 1): 0.0760774
#> betas:    0.6118  -0.0760   0.7279   1.2355   0.3935   0.3915   0.5599   0.6617  -0.6197   0.3203  -0.2777  -0.2148
#> 
#> sigma: 0.162838
#> lambda (gene 1): 1.20826
#> epsilon (gene 1): 0.161336
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 12040 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 519.15
#> delta (gene 1): 0.997136
#> phi (cell 1): 0.844322
#> s (cell 1): 1.81607
#> nu (cell 1): 0.420055
#> theta (batch 1): 0.25793
#> betas:    0.7933  -0.0170   0.2893   0.9340   1.0651   0.2405  -0.1750   0.5934  -0.0113  -0.6015  -0.1556  -0.7757
#> 
#> sigma: 0.115508
#> lambda (gene 1): 1.89999
#> epsilon (gene 1): 0.147966
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 12060 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 697.949
#> delta (gene 1): 0.552708
#> phi (cell 1): 0.917822
#> s (cell 1): 1.22981
#> nu (cell 1): 0.428666
#> theta (batch 1): 0.219535
#> betas:    1.0198  -0.0998   0.1687   0.9752   0.7674   0.3258   0.3123   0.1677   0.1740  -0.0935  -0.8724   0.1331
#> 
#> sigma: 0.171615
#> lambda (gene 1): 1.37952
#> epsilon (gene 1): -0.38946
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 12080 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 632.597
#> delta (gene 1): 0.453286
#> phi (cell 1): 0.981992
#> s (cell 1): 0.548924
#> nu (cell 1): 0.405606
#> theta (batch 1): 0.376818
#> betas:    0.9608  -0.1921   0.9175   0.5586   1.0599   0.4791   0.2757   0.4280  -0.0231  -0.0516   0.1018  -0.0408
#> 
#> sigma: 0.206612
#> lambda (gene 1): 1.38663
#> epsilon (gene 1): -0.574535
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 12100 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 654.605
#> delta (gene 1): 0.528841
#> phi (cell 1): 0.849301
#> s (cell 1): 0.647498
#> nu (cell 1): 0.432904
#> theta (batch 1): 0.179384
#> betas:    0.9211  -0.0178   1.0455   0.5993   0.5192   0.6569  -0.2772   0.6224  -0.7167  -0.1378  -0.6915  -0.3714
#> 
#> sigma: 0.165469
#> lambda (gene 1): 0.743895
#> epsilon (gene 1): -0.325817
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 12120 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 612.068
#> delta (gene 1): 0.507046
#> phi (cell 1): 0.642409
#> s (cell 1): 0.217719
#> nu (cell 1): 0.414754
#> theta (batch 1): 0.323812
#> betas:    0.3554   0.0676   0.6758   0.7101   0.6519   0.6907   0.3037  -0.3047   0.0900  -0.0529  -1.1192  -0.2902
#> 
#> sigma: 0.168518
#> lambda (gene 1): 1.75935
#> epsilon (gene 1): -0.500118
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 12140 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 535.323
#> delta (gene 1): 0.938219
#> phi (cell 1): 0.676142
#> s (cell 1): 1.8735
#> nu (cell 1): 0.43186
#> theta (batch 1): 0.557344
#> betas:    1.1284  -0.1124   0.8570   0.9122   0.4450   0.5858  -0.3187   0.8751  -0.5209  -0.0229  -0.3127  -0.3756
#> 
#> sigma: 0.227136
#> lambda (gene 1): 2.07239
#> epsilon (gene 1): 0.0891232
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 12160 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 688.182
#> delta (gene 1): 0.669444
#> phi (cell 1): 0.641841
#> s (cell 1): 0.375623
#> nu (cell 1): 0.432429
#> theta (batch 1): 0.560638
#> betas:    0.9101  -0.0773   0.3131   0.4310   0.9025   0.4162  -0.0377   0.5765  -0.3383  -0.0864  -0.4421  -0.4066
#> 
#> sigma: 0.209661
#> lambda (gene 1): 1.22238
#> epsilon (gene 1): -0.15752
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 12180 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 703.351
#> delta (gene 1): 0.778171
#> phi (cell 1): 0.653481
#> s (cell 1): 0.210134
#> nu (cell 1): 0.417671
#> theta (batch 1): 0.291285
#> betas:    0.3871   0.0804   0.3629   0.7478   1.1813   0.1444   0.6912  -0.1145  -0.6109   0.0661  -0.6452  -0.8747
#> 
#> sigma: 0.187741
#> lambda (gene 1): 0.475384
#> epsilon (gene 1): -0.0953284
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 12200 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 780.096
#> delta (gene 1): 0.934188
#> phi (cell 1): 0.752985
#> s (cell 1): 0.746796
#> nu (cell 1): 0.43005
#> theta (batch 1): 0.173619
#> betas:    1.0827  -0.1330   1.0047   0.5277   0.4454   0.9918   0.1106  -0.1773   0.6518  -0.6927  -0.0609   0.0694
#> 
#> sigma: 0.15757
#> lambda (gene 1): 0.955837
#> epsilon (gene 1): 0.0576332
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 12220 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 790.278
#> delta (gene 1): 0.637632
#> phi (cell 1): 0.738447
#> s (cell 1): 0.44814
#> nu (cell 1): 0.440401
#> theta (batch 1): 0.115574
#> betas:    0.6112  -0.0444   0.6611   0.8620   0.6526   0.4786   0.4601   0.2636  -0.2766  -0.1390  -0.2786  -0.5537
#> 
#> sigma: 0.108658
#> lambda (gene 1): 0.920805
#> epsilon (gene 1): -0.147094
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 12240 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 801.532
#> delta (gene 1): 0.637825
#> phi (cell 1): 0.758755
#> s (cell 1): 0.467032
#> nu (cell 1): 0.414361
#> theta (batch 1): 0.201131
#> betas:    0.9813  -0.2372   0.6756   0.4870   0.8499   0.2160   0.7840   0.3957   0.1091   0.2709   0.1607  -0.0627
#> 
#> sigma: 0.156388
#> lambda (gene 1): 0.885088
#> epsilon (gene 1): -0.408136
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 12260 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 924.77
#> delta (gene 1): 0.656932
#> phi (cell 1): 0.815179
#> s (cell 1): 0.580947
#> nu (cell 1): 0.441371
#> theta (batch 1): 0.0951833
#> betas:    0.8001  -0.0275   0.3799   0.7488   0.2947   0.5945   0.2197   0.0004   0.2664  -0.6730  -0.4018  -0.3340
#> 
#> sigma: 0.13664
#> lambda (gene 1): 0.551371
#> epsilon (gene 1): -0.14565
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 12280 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 557.537
#> delta (gene 1): 1.00441
#> phi (cell 1): 0.758368
#> s (cell 1): 0.591222
#> nu (cell 1): 0.424524
#> theta (batch 1): 0.236262
#> betas:    1.1351  -0.0416   0.2142   0.8716   0.6248   0.0192   0.5364  -0.1422  -0.0124  -0.5158  -0.5295  -0.5622
#> 
#> sigma: 0.162498
#> lambda (gene 1): 0.849233
#> epsilon (gene 1): 0.247067
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 12300 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 808.23
#> delta (gene 1): 0.609005
#> phi (cell 1): 0.703994
#> s (cell 1): 0.583983
#> nu (cell 1): 0.424073
#> theta (batch 1): 0.0260951
#> betas:    0.8535  -0.0398   0.7443   1.1514   0.3951   0.7027   0.3025  -0.0017   0.1790  -0.6026  -0.5106  -0.2680
#> 
#> sigma: 0.127939
#> lambda (gene 1): 1.34239
#> epsilon (gene 1): -0.145475
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 12320 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 581.725
#> delta (gene 1): 0.745766
#> phi (cell 1): 0.689173
#> s (cell 1): 0.327837
#> nu (cell 1): 0.426613
#> theta (batch 1): 0.217164
#> betas:    0.8434  -0.0702   0.0074   0.9016   0.5941   0.4956   0.1040   0.2199  -0.1512  -0.0883  -0.6399   0.2461
#> 
#> sigma: 0.154753
#> lambda (gene 1): 1.78114
#> epsilon (gene 1): -0.119118
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 12340 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 551.307
#> delta (gene 1): 0.642539
#> phi (cell 1): 0.573936
#> s (cell 1): 0.539151
#> nu (cell 1): 0.428737
#> theta (batch 1): 0.214082
#> betas:    1.0492  -0.0232   0.7205   0.8815  -0.0778   1.1546  -0.0381  -0.2665  -0.1210  -0.6042   0.0417  -1.0801
#> 
#> sigma: 0.224326
#> lambda (gene 1): 0.575327
#> epsilon (gene 1): -0.31984
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 12360 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 966.903
#> delta (gene 1): 0.619286
#> phi (cell 1): 0.631649
#> s (cell 1): 0.378153
#> nu (cell 1): 0.408488
#> theta (batch 1): 0.331162
#> betas:    0.9148  -0.0531   0.0351   0.7952   0.4070   0.8226   0.0288  -0.0205   0.2332  -0.6409  -0.3686  -0.4860
#> 
#> sigma: 0.186734
#> lambda (gene 1): 2.17768
#> epsilon (gene 1): -0.130421
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 12380 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 782.714
#> delta (gene 1): 0.607854
#> phi (cell 1): 0.675729
#> s (cell 1): 0.623455
#> nu (cell 1): 0.405714
#> theta (batch 1): 0.189108
#> betas:    1.1386  -0.0730   1.1786   0.6157   0.6239   0.0573   0.3896   0.0587   0.0198  -0.4123  -0.5655  -0.2973
#> 
#> sigma: 0.158231
#> lambda (gene 1): 0.519299
#> epsilon (gene 1): -0.261295
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 12400 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 659.27
#> delta (gene 1): 0.669789
#> phi (cell 1): 0.722538
#> s (cell 1): 0.468577
#> nu (cell 1): 0.424574
#> theta (batch 1): 0.216178
#> betas:    1.0938  -0.0943   0.9186  -0.1502   1.0090   0.4884   0.0695  -0.0660   0.3082  -0.1779  -0.9178  -0.0008
#> 
#> sigma: 0.169576
#> lambda (gene 1): 1.11821
#> epsilon (gene 1): -0.179711
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 12420 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 750.715
#> delta (gene 1): 0.784375
#> phi (cell 1): 0.692767
#> s (cell 1): 0.270706
#> nu (cell 1): 0.418603
#> theta (batch 1): 0.357471
#> betas:    0.3838   0.0617   0.6043   0.5073   1.3581   0.3085   0.0405   0.0707  -0.1874  -0.5807  -0.3448  -0.6038
#> 
#> sigma: 0.157228
#> lambda (gene 1): 0.196206
#> epsilon (gene 1): 0.084371
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 12440 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 640.291
#> delta (gene 1): 0.808705
#> phi (cell 1): 0.753936
#> s (cell 1): 1.34173
#> nu (cell 1): 0.426191
#> theta (batch 1): 0.214337
#> betas:    0.8620   0.0131   0.4530   0.1215   0.6994   0.6024   0.2990  -0.1593  -0.4227   0.1534  -1.1591  -0.2196
#> 
#> sigma: 0.247648
#> lambda (gene 1): 1.30466
#> epsilon (gene 1): -0.0700375
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 12460 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 740.284
#> delta (gene 1): 0.684684
#> phi (cell 1): 0.730614
#> s (cell 1): 0.387405
#> nu (cell 1): 0.429797
#> theta (batch 1): 0.539375
#> betas:    0.9595  -0.1915   1.0375   0.3501   0.4346   1.1783   0.1470   0.3571   0.1805   0.0289  -0.1829   0.0582
#> 
#> sigma: 0.16161
#> lambda (gene 1): 1.42472
#> epsilon (gene 1): -0.171327
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 12480 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 669.41
#> delta (gene 1): 0.808158
#> phi (cell 1): 0.781468
#> s (cell 1): 0.638869
#> nu (cell 1): 0.433377
#> theta (batch 1): 0.298076
#> betas:    0.3089  -0.0322   1.0552   0.8148   0.9304   0.4722   0.5236  -0.3784   0.5023  -0.0122  -0.7456  -0.0584
#> 
#> sigma: 0.181996
#> lambda (gene 1): 0.301676
#> epsilon (gene 1): 0.0246416
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 12500 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 717.459
#> delta (gene 1): 0.906661
#> phi (cell 1): 0.736004
#> s (cell 1): 0.413991
#> nu (cell 1): 0.422986
#> theta (batch 1): 0.177183
#> betas:    0.6449  -0.0079   0.6954   0.8120   0.6410   0.5890  -0.0869   0.3889   0.0022  -0.6837  -0.1193  -0.3115
#> 
#> sigma: 0.154922
#> lambda (gene 1): 0.644033
#> epsilon (gene 1): 0.0900901
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 12520 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 655.784
#> delta (gene 1): 0.629456
#> phi (cell 1): 0.743357
#> s (cell 1): 0.332898
#> nu (cell 1): 0.41972
#> theta (batch 1): 0.11974
#> betas:    0.6168  -0.1070   0.1378   1.0399   0.9035   0.2153   0.9377   0.0295  -0.0246  -0.1925   0.1181  -0.2665
#> 
#> sigma: 0.162363
#> lambda (gene 1): 0.526962
#> epsilon (gene 1): -0.211656
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 12540 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 857.967
#> delta (gene 1): 0.850978
#> phi (cell 1): 0.719607
#> s (cell 1): 0.423123
#> nu (cell 1): 0.427589
#> theta (batch 1): 0.0570766
#> betas:    0.6944  -0.0245   0.1767   1.0309   0.2260   0.7010   0.4544  -0.0022  -0.1846  -0.4644   0.1227  -0.6741
#> 
#> sigma: 0.164466
#> lambda (gene 1): 0.972503
#> epsilon (gene 1): -0.0250721
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 12560 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 634.591
#> delta (gene 1): 0.875521
#> phi (cell 1): 0.786637
#> s (cell 1): 0.365697
#> nu (cell 1): 0.41603
#> theta (batch 1): 0.0616823
#> betas:    0.3352   0.0480   0.1054   1.2830   0.8661   0.2658   0.5797   0.0697  -0.1226  -0.1260  -0.5870  -0.5872
#> 
#> sigma: 0.164205
#> lambda (gene 1): 0.952038
#> epsilon (gene 1): 0.000750823
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 12580 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 737.131
#> delta (gene 1): 0.960631
#> phi (cell 1): 0.775561
#> s (cell 1): 0.488561
#> nu (cell 1): 0.417237
#> theta (batch 1): 0.0317632
#> betas:    0.7163  -0.0377   0.6735   0.8736   0.1964   0.6263   0.5482  -0.2916   0.3178  -0.5666   0.0850  -0.8474
#> 
#> sigma: 0.151041
#> lambda (gene 1): 1.0733
#> epsilon (gene 1): 0.075401
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 12600 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 806.776
#> delta (gene 1): 0.735775
#> phi (cell 1): 0.768988
#> s (cell 1): 0.469477
#> nu (cell 1): 0.441392
#> theta (batch 1): 0.00905975
#> betas:    0.9094  -0.2332   0.4675   0.9502   1.0094   0.8644  -0.2190   0.7115   0.3259  -0.3232   0.5237   0.0976
#> 
#> sigma: 0.144954
#> lambda (gene 1): 1.35222
#> epsilon (gene 1): -0.127088
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 12620 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 634.793
#> delta (gene 1): 0.841297
#> phi (cell 1): 0.781228
#> s (cell 1): 0.399034
#> nu (cell 1): 0.415672
#> theta (batch 1): 0.0519762
#> betas:    0.7390  -0.0360   0.4715   1.0665   0.2808   0.9643  -0.2151   0.6374  -0.3126  -0.3422  -0.4818  -0.1675
#> 
#> sigma: 0.183548
#> lambda (gene 1): 0.978633
#> epsilon (gene 1): 0.157253
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 12640 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 802.654
#> delta (gene 1): 0.811771
#> phi (cell 1): 0.766043
#> s (cell 1): 0.579991
#> nu (cell 1): 0.391285
#> theta (batch 1): 0.070455
#> betas:    0.2042   0.0329   1.3330   0.4124   0.9514   0.4714   0.7326  -0.2226   0.0891   0.0907  -0.8095  -0.3846
#> 
#> sigma: 0.148829
#> lambda (gene 1): 0.727423
#> epsilon (gene 1): -0.0294873
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 12660 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 692.89
#> delta (gene 1): 0.434667
#> phi (cell 1): 0.605155
#> s (cell 1): 0.430321
#> nu (cell 1): 0.431356
#> theta (batch 1): 0.106321
#> betas:    1.1797  -0.1507   0.9060   0.6901   0.1373   1.0030   0.1502   0.0357  -0.2472   0.0273   0.1672  -0.6613
#> 
#> sigma: 0.168128
#> lambda (gene 1): 0.795999
#> epsilon (gene 1): -0.826916
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 12680 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 831.93
#> delta (gene 1): 0.727832
#> phi (cell 1): 0.668356
#> s (cell 1): 0.520115
#> nu (cell 1): 0.401226
#> theta (batch 1): 0.116167
#> betas:    0.8574  -0.1872   0.6889   0.7661   0.9859   0.6170   0.4712   0.1688   0.1768   0.2943  -0.4605   0.4060
#> 
#> sigma: 0.156172
#> lambda (gene 1): 0.828288
#> epsilon (gene 1): -0.15803
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 12700 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 961.23
#> delta (gene 1): 0.758873
#> phi (cell 1): 0.706308
#> s (cell 1): 0.395991
#> nu (cell 1): 0.423788
#> theta (batch 1): 0.289553
#> betas:    0.8775  -0.0903   0.4484   0.9340   0.1458   0.4883   0.7105   0.0019  -0.0784  -0.1822   0.0026  -0.6068
#> 
#> sigma: 0.142592
#> lambda (gene 1): 1.24844
#> epsilon (gene 1): -0.171342
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 12720 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 671.737
#> delta (gene 1): 0.73957
#> phi (cell 1): 0.64029
#> s (cell 1): 0.439455
#> nu (cell 1): 0.411452
#> theta (batch 1): 0.395843
#> betas:    0.6872  -0.0004   0.1994   1.1206   0.1597   0.8585   0.2254  -0.1963   0.0645  -0.3463  -0.3454  -0.4916
#> 
#> sigma: 0.125534
#> lambda (gene 1): 0.54705
#> epsilon (gene 1): -0.245346
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 12740 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 711.389
#> delta (gene 1): 0.730725
#> phi (cell 1): 0.71157
#> s (cell 1): 0.398041
#> nu (cell 1): 0.41151
#> theta (batch 1): 0.161726
#> betas:    0.8550  -0.1415   0.8193   1.2098   0.2706   0.4844   0.4120   0.2692  -0.0185  -0.0329  -0.3690   0.1146
#> 
#> sigma: 0.163179
#> lambda (gene 1): 3.18493
#> epsilon (gene 1): -0.00659207
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 12760 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 852.359
#> delta (gene 1): 0.56199
#> phi (cell 1): 0.796734
#> s (cell 1): 0.440488
#> nu (cell 1): 0.413274
#> theta (batch 1): 0.14188
#> betas:    0.6740  -0.0486   0.3973   0.6366   1.2107   0.3555   0.4367   0.1253   0.0475  -0.2726  -0.0796  -0.6595
#> 
#> sigma: 0.160523
#> lambda (gene 1): 0.772445
#> epsilon (gene 1): -0.47559
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 12780 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 734.908
#> delta (gene 1): 0.628211
#> phi (cell 1): 0.731591
#> s (cell 1): 0.558919
#> nu (cell 1): 0.423589
#> theta (batch 1): 0.208686
#> betas:    0.9483  -0.0649   0.8670   0.4102   1.0258   0.0598   0.2456   0.2605   0.0678  -0.3893  -0.2983  -0.3454
#> 
#> sigma: 0.141257
#> lambda (gene 1): 0.365954
#> epsilon (gene 1): -0.373101
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 12800 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 838.21
#> delta (gene 1): 0.831462
#> phi (cell 1): 0.728204
#> s (cell 1): 0.290347
#> nu (cell 1): 0.420387
#> theta (batch 1): 0.462334
#> betas:    0.8259  -0.1383   0.1045   0.9065   0.6706   0.6415   0.6623   0.0143   0.0354  -0.0054   0.0534  -0.2890
#> 
#> sigma: 0.151124
#> lambda (gene 1): 0.908767
#> epsilon (gene 1): -0.0917415
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 12820 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 864.87
#> delta (gene 1): 0.757223
#> phi (cell 1): 0.675915
#> s (cell 1): 0.412572
#> nu (cell 1): 0.43852
#> theta (batch 1): 0.234827
#> betas:    0.7379  -0.1103   0.5562   0.8036   1.0547   0.4063   0.7157   0.0707   0.0930  -0.2870  -0.0302  -0.1812
#> 
#> sigma: 0.162709
#> lambda (gene 1): 1.28633
#> epsilon (gene 1): -0.0213806
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 12840 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 928.327
#> delta (gene 1): 0.754174
#> phi (cell 1): 0.807656
#> s (cell 1): 0.566225
#> nu (cell 1): 0.414845
#> theta (batch 1): 0.275965
#> betas:    0.7023  -0.0009   0.7138   0.5881   0.6821   0.3246   0.2710   0.0794  -0.1882  -0.3616  -0.2573  -0.6862
#> 
#> sigma: 0.164169
#> lambda (gene 1): 1.80856
#> epsilon (gene 1): -0.127246
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 12860 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 531.063
#> delta (gene 1): 0.607496
#> phi (cell 1): 0.880657
#> s (cell 1): 0.892442
#> nu (cell 1): 0.416173
#> theta (batch 1): 0.22084
#> betas:    1.1972  -0.2197   0.7515   0.5550   0.7933   0.6127  -0.0001   0.4788  -0.0196   0.0808  -0.1064   0.1258
#> 
#> sigma: 0.145642
#> lambda (gene 1): 0.731592
#> epsilon (gene 1): -0.359785
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 12880 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 924.586
#> delta (gene 1): 1.01519
#> phi (cell 1): 0.996701
#> s (cell 1): 2.71427
#> nu (cell 1): 0.42181
#> theta (batch 1): 0.35207
#> betas:    0.9536  -0.0827   0.3889   0.8156   1.0034  -0.1510   0.6022   0.3733  -0.6835   0.0512  -0.2190  -0.5239
#> 
#> sigma: 0.217541
#> lambda (gene 1): 0.528866
#> epsilon (gene 1): 0.224974
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 12900 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 741.652
#> delta (gene 1): 1.03142
#> phi (cell 1): 0.964976
#> s (cell 1): 1.06894
#> nu (cell 1): 0.424797
#> theta (batch 1): 0.178378
#> betas:    4.7366e-01  -8.5544e-02   8.2991e-01   7.2151e-01   5.3524e-01   6.1118e-01   7.3761e-01  -3.6927e-02   9.8104e-02   2.1675e-01  -4.8821e-01  -5.4725e-05
#> 
#> sigma: 0.128444
#> lambda (gene 1): 0.963726
#> epsilon (gene 1): 0.20018
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 12920 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 817.705
#> delta (gene 1): 0.651027
#> phi (cell 1): 0.903266
#> s (cell 1): 0.463902
#> nu (cell 1): 0.410925
#> theta (batch 1): 0.161819
#> betas:    0.6811  -0.0107   0.5125   0.9470   0.3749   0.5406   0.2967   0.2156  -0.2816  -0.5419  -0.0652  -0.4701
#> 
#> sigma: 0.143106
#> lambda (gene 1): 2.71241
#> epsilon (gene 1): -0.187284
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 12940 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 616.73
#> delta (gene 1): 0.573468
#> phi (cell 1): 0.868529
#> s (cell 1): 0.644647
#> nu (cell 1): 0.414294
#> theta (batch 1): 0.407141
#> betas:    0.4280   0.0283   1.0808   1.0207   0.2280   0.5802   0.9083  -0.4664  -0.0891  -0.0889  -0.4370  -0.6040
#> 
#> sigma: 0.154967
#> lambda (gene 1): 1.11995
#> epsilon (gene 1): -0.451109
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 12960 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 564.865
#> delta (gene 1): 0.729595
#> phi (cell 1): 0.88308
#> s (cell 1): 1.18692
#> nu (cell 1): 0.403838
#> theta (batch 1): 0.345269
#> betas:    0.9303  -0.0307   0.9051   0.3600   0.8640   0.3640   0.3100  -0.0720  -0.0346  -0.5924   0.0520  -0.8848
#> 
#> sigma: 0.173321
#> lambda (gene 1): 0.839591
#> epsilon (gene 1): -0.207133
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 12980 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 740.11
#> delta (gene 1): 0.515074
#> phi (cell 1): 0.893912
#> s (cell 1): 0.459771
#> nu (cell 1): 0.435196
#> theta (batch 1): 0.0820746
#> betas:    0.6222  -0.0738   0.4604   0.8342   1.0396   0.2947   0.0316   0.6529   0.0529  -0.1531  -0.5920  -0.0123
#> 
#> sigma: 0.150525
#> lambda (gene 1): 0.728695
#> epsilon (gene 1): -0.361565
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 13000 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 750.366
#> delta (gene 1): 0.562971
#> phi (cell 1): 1.00779
#> s (cell 1): 0.226523
#> nu (cell 1): 0.420141
#> theta (batch 1): 0.458687
#> betas:    0.9887  -0.1384   0.1131   1.0059   0.6647   0.2637   0.5590  -0.0362  -0.1317   0.2582  -0.5204  -0.0503
#> 
#> sigma: 0.157401
#> lambda (gene 1): 0.520162
#> epsilon (gene 1): -0.414481
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 13020 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 708.844
#> delta (gene 1): 0.47782
#> phi (cell 1): 1.09081
#> s (cell 1): 1.12869
#> nu (cell 1): 0.432234
#> theta (batch 1): 0.359526
#> betas:    1.3323  -0.1865  -0.0144   1.1841   0.3632   0.6461  -0.0100   0.4543  -0.2977  -0.2259   0.1187  -0.1131
#> 
#> sigma: 0.196203
#> lambda (gene 1): 0.221365
#> epsilon (gene 1): -0.567021
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 13040 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 1102.56
#> delta (gene 1): 0.850583
#> phi (cell 1): 1.14639
#> s (cell 1): 0.6064
#> nu (cell 1): 0.4151
#> theta (batch 1): 0.246879
#> betas:    1.2034  -0.1466   0.8249   0.2730   0.5764   0.8315  -0.0042  -0.1092   0.5648  -0.4393  -0.3690  -0.0619
#> 
#> sigma: 0.16738
#> lambda (gene 1): 1.06499
#> epsilon (gene 1): 0.00136096
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 13060 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 861.352
#> delta (gene 1): 0.427553
#> phi (cell 1): 0.953661
#> s (cell 1): 0.376107
#> nu (cell 1): 0.412042
#> theta (batch 1): 0.216497
#> betas:   -0.2986   0.1399   0.6506   0.9449   0.9813   0.4483   0.6167   0.3590  -0.1451  -0.3211  -0.2793  -0.9429
#> 
#> sigma: 0.170918
#> lambda (gene 1): 0.372514
#> epsilon (gene 1): -0.678317
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 13080 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 746.788
#> delta (gene 1): 0.615276
#> phi (cell 1): 0.969648
#> s (cell 1): 0.449216
#> nu (cell 1): 0.425938
#> theta (batch 1): 0.107818
#> betas:    0.4883   0.0295   0.9603   0.1918   0.8221   0.6786   0.3535  -0.3321   0.3220  -0.6332  -0.4112  -0.4581
#> 
#> sigma: 0.137064
#> lambda (gene 1): 0.272485
#> epsilon (gene 1): -0.245996
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 13100 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 543.988
#> delta (gene 1): 0.895292
#> phi (cell 1): 0.834018
#> s (cell 1): 0.371032
#> nu (cell 1): 0.430072
#> theta (batch 1): 0.0513434
#> betas:    0.6678  -0.1203   0.6077   1.1621   0.7695   0.5847   0.4481   0.4275   0.0342   0.0578  -0.6983   0.7132
#> 
#> sigma: 0.204444
#> lambda (gene 1): 1.19146
#> epsilon (gene 1): 0.159673
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 13120 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 670.218
#> delta (gene 1): 0.766833
#> phi (cell 1): 0.949897
#> s (cell 1): 0.265049
#> nu (cell 1): 0.413371
#> theta (batch 1): 0.0873005
#> betas:    1.4671  -0.0168   0.2174   0.7421   0.5463   0.0539  -0.0024  -0.1286   0.0614  -0.9109  -0.3847  -0.9922
#> 
#> sigma: 0.169911
#> lambda (gene 1): 2.63638
#> epsilon (gene 1): -0.143998
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 13140 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 695.808
#> delta (gene 1): 0.653761
#> phi (cell 1): 0.753127
#> s (cell 1): 0.518574
#> nu (cell 1): 0.42485
#> theta (batch 1): 0.30606
#> betas:    0.8900  -0.1116   0.9211   1.0054   0.2074   0.7113   0.7882  -0.2300   0.2145  -0.1232  -0.5448  -0.0432
#> 
#> sigma: 0.191813
#> lambda (gene 1): 0.776343
#> epsilon (gene 1): -0.141611
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 13160 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 609.427
#> delta (gene 1): 0.63796
#> phi (cell 1): 0.814033
#> s (cell 1): 1.09272
#> nu (cell 1): 0.422047
#> theta (batch 1): 0.506605
#> betas:    0.6620  -0.1269   0.3179   0.8141   0.7278   0.6849   0.3636   0.3677   0.0174  -0.0558  -0.0277  -0.0277
#> 
#> sigma: 0.198178
#> lambda (gene 1): 1.62474
#> epsilon (gene 1): -0.28571
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 13180 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 827.948
#> delta (gene 1): 0.636007
#> phi (cell 1): 0.775895
#> s (cell 1): 0.483536
#> nu (cell 1): 0.428354
#> theta (batch 1): 0.169523
#> betas:    0.7389  -0.1752   1.2887   0.5126   0.6449   0.8919   0.2351   0.3655   0.4716  -0.2093  -0.1820   0.1354
#> 
#> sigma: 0.165959
#> lambda (gene 1): 0.513509
#> epsilon (gene 1): -0.111895
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 13200 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 843.206
#> delta (gene 1): 0.716143
#> phi (cell 1): 0.720897
#> s (cell 1): 0.952462
#> nu (cell 1): 0.417742
#> theta (batch 1): 0.572461
#> betas:    0.4461  -0.0665   0.9108   0.3904   0.9932   0.5717   0.5092   0.1179   0.0797  -0.2893   0.0730  -0.3425
#> 
#> sigma: 0.128648
#> lambda (gene 1): 0.652042
#> epsilon (gene 1): -0.101209
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 13220 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 635.544
#> delta (gene 1): 0.761777
#> phi (cell 1): 0.680185
#> s (cell 1): 0.585161
#> nu (cell 1): 0.4248
#> theta (batch 1): 0.168366
#> betas:    1.2985  -0.1449   0.9485   0.3261   0.3568   0.5964   0.2453  -0.0972  -0.0121  -0.1988  -0.5127   0.0744
#> 
#> sigma: 0.16469
#> lambda (gene 1): 1.03174
#> epsilon (gene 1): -0.0211056
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 13240 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 757.134
#> delta (gene 1): 0.56956
#> phi (cell 1): 0.777784
#> s (cell 1): 0.469318
#> nu (cell 1): 0.440976
#> theta (batch 1): 0.0640216
#> betas:    0.8784  -0.1451   0.9631   0.7542   0.8082   0.1734  -0.0199   0.8859   0.1053  -0.5648  -0.3002   0.4740
#> 
#> sigma: 0.166203
#> lambda (gene 1): 0.705709
#> epsilon (gene 1): -0.078605
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 13260 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 625.808
#> delta (gene 1): 0.460643
#> phi (cell 1): 0.758345
#> s (cell 1): 0.493747
#> nu (cell 1): 0.427565
#> theta (batch 1): 0.128194
#> betas:    0.8538  -0.1175   0.2772   0.7472   0.6416   0.6246   0.5234   0.1386  -0.4326   0.4053  -0.4223  -0.1622
#> 
#> sigma: 0.14439
#> lambda (gene 1): 0.76187
#> epsilon (gene 1): -0.649888
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 13280 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 737.11
#> delta (gene 1): 0.64543
#> phi (cell 1): 0.73114
#> s (cell 1): 0.545247
#> nu (cell 1): 0.423085
#> theta (batch 1): 0.181794
#> betas:    1.1079  -0.0996   0.3449   0.9694   0.5227   0.3904   0.1662   0.3395  -0.0061  -0.4063  -0.4101  -0.2295
#> 
#> sigma: 0.152384
#> lambda (gene 1): 1.14914
#> epsilon (gene 1): -0.173392
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 13300 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 881.792
#> delta (gene 1): 0.691331
#> phi (cell 1): 0.722616
#> s (cell 1): 0.490398
#> nu (cell 1): 0.420816
#> theta (batch 1): 0.202593
#> betas:    0.9850  -0.1312   0.2510   0.7596   0.6265   0.5587   0.4482  -0.0789   0.0070   0.2195  -0.6564   0.2319
#> 
#> sigma: 0.202378
#> lambda (gene 1): 0.268186
#> epsilon (gene 1): -0.271654
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 13320 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 582.516
#> delta (gene 1): 0.73552
#> phi (cell 1): 0.801317
#> s (cell 1): 0.33614
#> nu (cell 1): 0.416438
#> theta (batch 1): 0.126553
#> betas:    0.9911  -0.1528   1.5825   0.3366   0.2266   0.8728   0.3669   0.1864   0.2131  -0.1665  -0.0650  -0.3328
#> 
#> sigma: 0.169495
#> lambda (gene 1): 1.70578
#> epsilon (gene 1): -0.16152
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 13340 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 618.224
#> delta (gene 1): 0.554777
#> phi (cell 1): 0.808343
#> s (cell 1): 0.341604
#> nu (cell 1): 0.415673
#> theta (batch 1): 0.0650464
#> betas:    0.4829  -0.1630   0.7277   1.1618   0.3989   1.0153   0.6867   0.3548  -0.0846   0.2652   0.0796  -0.1260
#> 
#> sigma: 0.168223
#> lambda (gene 1): 0.606307
#> epsilon (gene 1): -0.321758
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 13360 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 707.054
#> delta (gene 1): 0.694657
#> phi (cell 1): 0.813593
#> s (cell 1): 0.816896
#> nu (cell 1): 0.41245
#> theta (batch 1): 0.260357
#> betas:    0.7345   0.0325   0.6488   0.7486   0.5298   0.7305   0.0568   0.1928  -0.1060  -0.4924  -0.4771  -1.0277
#> 
#> sigma: 0.189775
#> lambda (gene 1): 0.903208
#> epsilon (gene 1): -0.137247
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 13380 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 675.578
#> delta (gene 1): 0.450418
#> phi (cell 1): 0.801422
#> s (cell 1): 0.206363
#> nu (cell 1): 0.41992
#> theta (batch 1): 0.263848
#> betas:    0.7269  -0.0302   0.4043   0.7541   0.7591   0.4179   0.0870   0.1632   0.1027  -0.4952  -0.0812  -0.4995
#> 
#> sigma: 0.21029
#> lambda (gene 1): 1.48229
#> epsilon (gene 1): -0.728423
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 13400 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 725.06
#> delta (gene 1): 0.75147
#> phi (cell 1): 0.905148
#> s (cell 1): 0.186814
#> nu (cell 1): 0.415123
#> theta (batch 1): 0.133923
#> betas:    0.7568  -0.1583   0.9299   0.9862   0.6581   0.8671   0.1585   0.5605   0.0550  -0.0104  -0.1431  -0.0753
#> 
#> sigma: 0.16283
#> lambda (gene 1): 0.212713
#> epsilon (gene 1): -0.00971956
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 13420 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 1037.37
#> delta (gene 1): 0.970207
#> phi (cell 1): 0.824557
#> s (cell 1): 0.406424
#> nu (cell 1): 0.426395
#> theta (batch 1): 0.286098
#> betas:    0.6291  -0.0819   0.5252   0.9516   0.4326   1.0497   0.3103   0.1005  -0.0199  -0.0577  -0.1857  -0.2957
#> 
#> sigma: 0.136168
#> lambda (gene 1): 0.481638
#> epsilon (gene 1): 0.148731
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 13440 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 721.415
#> delta (gene 1): 0.536641
#> phi (cell 1): 0.82961
#> s (cell 1): 0.309106
#> nu (cell 1): 0.420611
#> theta (batch 1): 0.164619
#> betas:    1.1365  -0.1186  -0.0552   1.1526   0.5769   0.2852   0.3889   0.1960  -0.7278   0.2905  -0.4125  -0.3666
#> 
#> sigma: 0.197318
#> lambda (gene 1): 0.736023
#> epsilon (gene 1): -0.420762
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 13460 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 922.151
#> delta (gene 1): 0.693577
#> phi (cell 1): 0.822666
#> s (cell 1): 0.57982
#> nu (cell 1): 0.432365
#> theta (batch 1): 0.575755
#> betas:    0.9833   0.0847   1.4240   0.0567   1.1109  -0.0298   0.0187  -0.0983  -0.5970  -0.3616  -0.8875  -1.1814
#> 
#> sigma: 0.210742
#> lambda (gene 1): 0.754902
#> epsilon (gene 1): -0.124342
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 13480 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 595.974
#> delta (gene 1): 0.708689
#> phi (cell 1): 0.761623
#> s (cell 1): 0.871504
#> nu (cell 1): 0.422179
#> theta (batch 1): 0.181732
#> betas:    0.0565   0.1032   1.0513   0.7921   0.9261   0.5009   0.5862  -0.2443   0.0335  -0.0445  -0.8968  -0.5157
#> 
#> sigma: 0.178305
#> lambda (gene 1): 1.59691
#> epsilon (gene 1): -0.200953
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 13500 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 613.421
#> delta (gene 1): 0.678768
#> phi (cell 1): 0.823906
#> s (cell 1): 0.254519
#> nu (cell 1): 0.418249
#> theta (batch 1): 0.112769
#> betas:   -0.0155   0.0519   0.7654   0.8789   1.1038   0.4260   0.2783   0.4817  -0.0649  -0.0639  -0.4507  -0.3263
#> 
#> sigma: 0.149236
#> lambda (gene 1): 0.620899
#> epsilon (gene 1): -0.285614
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 13520 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 706.781
#> delta (gene 1): 0.750134
#> phi (cell 1): 0.833865
#> s (cell 1): 0.249365
#> nu (cell 1): 0.422329
#> theta (batch 1): 0.276879
#> betas:    1.2449  -0.2228   0.3559   0.6300   0.9432   0.1450   0.7859  -0.1897   0.5817  -0.1448  -0.2079   0.2231
#> 
#> sigma: 0.119736
#> lambda (gene 1): 1.03795
#> epsilon (gene 1): -0.177203
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 13540 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 754.933
#> delta (gene 1): 0.672269
#> phi (cell 1): 0.763749
#> s (cell 1): 0.486922
#> nu (cell 1): 0.439075
#> theta (batch 1): 0.51073
#> betas:    0.0190  -0.0210   1.2163   1.0512   0.9428   0.8933  -0.0996   0.9530   0.3605  -0.6131   0.1295  -0.1598
#> 
#> sigma: 0.164557
#> lambda (gene 1): 0.835455
#> epsilon (gene 1): -0.152434
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 13560 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 551.102
#> delta (gene 1): 0.874987
#> phi (cell 1): 0.849583
#> s (cell 1): 0.272383
#> nu (cell 1): 0.429069
#> theta (batch 1): 0.362735
#> betas:    0.9310  -0.1516   0.5519   0.5832   0.8288   0.8196   0.1244   0.3593  -0.0360   0.1402  -0.3575   0.0826
#> 
#> sigma: 0.132166
#> lambda (gene 1): 0.95178
#> epsilon (gene 1): -0.00583272
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 13580 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 750.362
#> delta (gene 1): 0.634359
#> phi (cell 1): 0.931171
#> s (cell 1): 0.691336
#> nu (cell 1): 0.433615
#> theta (batch 1): 0.202638
#> betas:    0.9486  -0.0839   0.3571   1.3428   0.4476   0.5821   0.1042   0.2181  -0.1700  -0.0065  -0.6008  -0.1360
#> 
#> sigma: 0.146753
#> lambda (gene 1): 0.24871
#> epsilon (gene 1): -0.282084
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 13600 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 831.438
#> delta (gene 1): 0.924638
#> phi (cell 1): 0.998671
#> s (cell 1): 0.412421
#> nu (cell 1): 0.42002
#> theta (batch 1): 0.144297
#> betas:    1.4898  -0.2278   0.2798   0.4074   0.4429   0.6776   0.3348  -0.2707   0.5413  -0.4936  -0.0507  -0.0821
#> 
#> sigma: 0.128779
#> lambda (gene 1): 0.891216
#> epsilon (gene 1): 0.1944
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 13620 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 696.325
#> delta (gene 1): 0.542817
#> phi (cell 1): 0.928259
#> s (cell 1): 0.943577
#> nu (cell 1): 0.414799
#> theta (batch 1): 0.324164
#> betas:    0.7053   0.0199   0.6122   0.1533   1.0622   0.4435  -0.0542   0.1844  -0.1912  -0.3581  -0.9096  -0.2114
#> 
#> sigma: 0.132829
#> lambda (gene 1): 1.40898
#> epsilon (gene 1): -0.251374
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 13640 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 773.067
#> delta (gene 1): 0.827202
#> phi (cell 1): 0.838602
#> s (cell 1): 0.838088
#> nu (cell 1): 0.417439
#> theta (batch 1): 0.578923
#> betas:    0.9560  -0.1119   0.7469   0.6100   0.6001   0.4722   0.6010  -0.0273   0.2022   0.0584  -0.5006  -0.3771
#> 
#> sigma: 0.143283
#> lambda (gene 1): 2.74002
#> epsilon (gene 1): -0.114606
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 13660 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 734.522
#> delta (gene 1): 0.476128
#> phi (cell 1): 0.853764
#> s (cell 1): 0.663103
#> nu (cell 1): 0.417825
#> theta (batch 1): 0.314689
#> betas:    1.3999  -0.1241  -0.1696   1.2866   0.1595   0.6329  -0.0449   0.0391   0.1550  -0.5577  -0.3002  -0.3740
#> 
#> sigma: 0.15082
#> lambda (gene 1): 1.25438
#> epsilon (gene 1): -0.531964
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 13680 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 660.444
#> delta (gene 1): 0.745612
#> phi (cell 1): 0.88462
#> s (cell 1): 1.45962
#> nu (cell 1): 0.433049
#> theta (batch 1): 0.532018
#> betas:    0.1747   0.0690   1.1783   0.8085   0.8940   0.1367   0.5561   0.1027  -0.0512  -0.1681  -1.0658  -0.0080
#> 
#> sigma: 0.156684
#> lambda (gene 1): 2.13623
#> epsilon (gene 1): 0.0472182
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 13700 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 626.214
#> delta (gene 1): 0.760283
#> phi (cell 1): 0.958779
#> s (cell 1): 0.811107
#> nu (cell 1): 0.41364
#> theta (batch 1): 0.657342
#> betas:    0.8225  -0.1575   1.2342   0.3800   0.9666   0.7277  -0.0072   0.5051   0.0138   0.2700  -0.4230   0.0939
#> 
#> sigma: 0.183303
#> lambda (gene 1): 1.09727
#> epsilon (gene 1): -0.139755
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 13720 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 627.916
#> delta (gene 1): 0.660087
#> phi (cell 1): 0.806513
#> s (cell 1): 0.344892
#> nu (cell 1): 0.422095
#> theta (batch 1): 0.128192
#> betas:    0.6013  -0.0616   1.0350   0.5990   0.9387   0.5411   0.4663   0.0888   0.1874  -0.0869  -0.4253  -0.3386
#> 
#> sigma: 0.134216
#> lambda (gene 1): 0.191164
#> epsilon (gene 1): -0.255174
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 13740 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 841.772
#> delta (gene 1): 0.842876
#> phi (cell 1): 0.680824
#> s (cell 1): 0.348513
#> nu (cell 1): 0.431822
#> theta (batch 1): 0.17513
#> betas:    0.7735  -0.1190   0.8985   0.5748   1.0206   0.3587   0.2339   0.4550   0.0837  -0.3152  -0.0994   0.0989
#> 
#> sigma: 0.144604
#> lambda (gene 1): 0.412621
#> epsilon (gene 1): 0.0487561
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 13760 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 674.466
#> delta (gene 1): 0.755506
#> phi (cell 1): 0.662951
#> s (cell 1): 0.618269
#> nu (cell 1): 0.412647
#> theta (batch 1): 0.240615
#> betas:    0.4426  -0.0877   0.7341   1.2586   0.6722   0.5782   0.7697   0.2281   0.1408  -0.1177  -0.3803   0.1185
#> 
#> sigma: 0.204401
#> lambda (gene 1): 0.392327
#> epsilon (gene 1): 0.065667
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 13780 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 789.863
#> delta (gene 1): 0.644589
#> phi (cell 1): 0.788286
#> s (cell 1): 0.602247
#> nu (cell 1): 0.418979
#> theta (batch 1): 0.61861
#> betas:    0.4954  -0.0253   0.7501   0.8664   0.7950   0.3793   0.4583   0.2765  -0.3393   0.4327  -1.0519   0.0156
#> 
#> sigma: 0.241413
#> lambda (gene 1): 1.13574
#> epsilon (gene 1): -0.254283
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 13800 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 740.185
#> delta (gene 1): 0.662725
#> phi (cell 1): 0.761825
#> s (cell 1): 0.599603
#> nu (cell 1): 0.413567
#> theta (batch 1): 0.0690542
#> betas:    1.3522  -0.1728   0.3474   0.9711   0.2401   0.7427   0.1684   0.0101   0.2683  -0.2582  -0.4218   0.0686
#> 
#> sigma: 0.149089
#> lambda (gene 1): 0.563142
#> epsilon (gene 1): -0.238897
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 13820 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 736.198
#> delta (gene 1): 0.594348
#> phi (cell 1): 0.734872
#> s (cell 1): 1.13643
#> nu (cell 1): 0.436725
#> theta (batch 1): 0.154083
#> betas:    0.4430   0.0420   0.6839   0.8068   0.4404   0.7260   0.1191   0.4029  -0.4407   0.0792  -0.7428  -0.6894
#> 
#> sigma: 0.153821
#> lambda (gene 1): 1.14264
#> epsilon (gene 1): -0.359394
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 13840 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 869.762
#> delta (gene 1): 0.603059
#> phi (cell 1): 0.59769
#> s (cell 1): 0.676146
#> nu (cell 1): 0.419613
#> theta (batch 1): 0.0869196
#> betas:    0.3295   0.0241   0.3625   0.7515   0.9980   0.3444   0.4792   0.2518   0.0922  -0.8995   0.1393  -0.5784
#> 
#> sigma: 0.177471
#> lambda (gene 1): 1.42622
#> epsilon (gene 1): -0.1681
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 13860 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 673.816
#> delta (gene 1): 0.777564
#> phi (cell 1): 0.665623
#> s (cell 1): 0.569654
#> nu (cell 1): 0.411953
#> theta (batch 1): 0.203685
#> betas:    1.0520  -0.1806   1.2784   0.5538  -0.0508   1.0192  -0.0314   0.3016   0.2346  -0.0256   0.0279  -0.2437
#> 
#> sigma: 0.165335
#> lambda (gene 1): 0.11159
#> epsilon (gene 1): -0.244172
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 13880 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 651.493
#> delta (gene 1): 0.867907
#> phi (cell 1): 0.680542
#> s (cell 1): 0.359929
#> nu (cell 1): 0.444417
#> theta (batch 1): 0.343497
#> betas:    0.9133  -0.0916   1.0744   0.5321   0.6885  -0.0511   0.9006  -0.1252  -0.0717  -0.2993  -0.2245  -0.1893
#> 
#> sigma: 0.102562
#> lambda (gene 1): 2.49127
#> epsilon (gene 1): 0.121164
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 13900 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 570.658
#> delta (gene 1): 0.61978
#> phi (cell 1): 0.712961
#> s (cell 1): 0.341525
#> nu (cell 1): 0.422532
#> theta (batch 1): 0.219614
#> betas:    1.1098  -0.0611   0.7231   0.7246   0.4772   0.2109   0.8811  -0.7968   0.3067  -0.3096  -0.8498   0.0421
#> 
#> sigma: 0.17053
#> lambda (gene 1): 0.918239
#> epsilon (gene 1): -0.299149
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 13920 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 630.267
#> delta (gene 1): 0.719641
#> phi (cell 1): 0.703197
#> s (cell 1): 1.92084
#> nu (cell 1): 0.415039
#> theta (batch 1): 0.353557
#> betas:    0.5358   0.1251   0.6318   0.5940   0.7438   0.4855  -0.2646   0.0565  -0.1801  -0.4632  -0.8794  -0.6553
#> 
#> sigma: 0.133041
#> lambda (gene 1): 2.70441
#> epsilon (gene 1): -0.262113
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 13940 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 755.062
#> delta (gene 1): 0.770184
#> phi (cell 1): 0.665475
#> s (cell 1): 0.629117
#> nu (cell 1): 0.435377
#> theta (batch 1): 0.156726
#> betas:    1.0333   0.0206   0.6791   1.0618  -0.1409   0.5662   0.3363  -0.3280  -0.3830  -0.2713  -0.4333  -1.2719
#> 
#> sigma: 0.188946
#> lambda (gene 1): 1.1975
#> epsilon (gene 1): -0.155014
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 13960 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 629.894
#> delta (gene 1): 0.697179
#> phi (cell 1): 0.721848
#> s (cell 1): 0.506489
#> nu (cell 1): 0.418058
#> theta (batch 1): 0.188174
#> betas:    0.3485   0.0013   0.7443   0.9365   0.5085   0.6812   0.3182   0.2045  -0.0419  -0.3202  -0.1920  -0.3891
#> 
#> sigma: 0.108199
#> lambda (gene 1): 0.123228
#> epsilon (gene 1): -0.168349
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 13980 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 775.148
#> delta (gene 1): 0.828303
#> phi (cell 1): 0.718766
#> s (cell 1): 0.233329
#> nu (cell 1): 0.412625
#> theta (batch 1): 0.440179
#> betas:    1.1921  -0.1331   0.5822   0.4471   0.6139   0.7204   0.2383  -0.2624   0.5652  -0.7266  -0.1652  -0.2893
#> 
#> sigma: 0.154436
#> lambda (gene 1): 0.512752
#> epsilon (gene 1): 0.117317
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 14000 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 600.916
#> delta (gene 1): 0.635006
#> phi (cell 1): 0.772514
#> s (cell 1): 0.68698
#> nu (cell 1): 0.422131
#> theta (batch 1): 0.325844
#> betas:    0.9483  -0.0531   0.0325   1.1867   0.3891   0.5917   0.3188  -0.2403   0.5291  -0.4106  -0.5635  -0.4381
#> 
#> sigma: 0.163358
#> lambda (gene 1): 0.529335
#> epsilon (gene 1): -0.387756
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 14020 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 674.196
#> delta (gene 1): 0.916512
#> phi (cell 1): 0.762453
#> s (cell 1): 0.66692
#> nu (cell 1): 0.444772
#> theta (batch 1): 0.128585
#> betas:    0.6330  -0.1351   0.9501   1.0406   0.1379   1.4048   0.3763   0.1438   0.3576  -0.4021   0.2648  -0.2602
#> 
#> sigma: 0.150598
#> lambda (gene 1): 1.37787
#> epsilon (gene 1): 0.173955
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 14040 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 773.154
#> delta (gene 1): 0.526902
#> phi (cell 1): 0.73575
#> s (cell 1): 0.924986
#> nu (cell 1): 0.428918
#> theta (batch 1): 0.17739
#> betas:    0.4599  -0.0841   0.5845   1.1211   0.7123   0.5637   0.5951   0.1707   0.1551  -0.2976  -0.0860   0.0996
#> 
#> sigma: 0.176706
#> lambda (gene 1): 0.927864
#> epsilon (gene 1): -0.366973
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 14060 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 605.828
#> delta (gene 1): 0.549625
#> phi (cell 1): 0.695072
#> s (cell 1): 0.794598
#> nu (cell 1): 0.427312
#> theta (batch 1): 0.142406
#> betas:    0.6296  -0.0447   0.6042   1.0057   0.0533   0.7760   0.2473   0.3446  -0.1750  -0.2653  -0.0127  -0.4571
#> 
#> sigma: 0.164117
#> lambda (gene 1): 0.507542
#> epsilon (gene 1): -0.493148
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 14080 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 845.163
#> delta (gene 1): 0.490407
#> phi (cell 1): 0.683384
#> s (cell 1): 0.643243
#> nu (cell 1): 0.41389
#> theta (batch 1): 0.0823541
#> betas:    1.0493  -0.1826   0.4756   0.6081   0.7120   0.6615   0.2690  -0.1583   0.7211  -0.2554  -0.1028  -0.0899
#> 
#> sigma: 0.158489
#> lambda (gene 1): 0.873307
#> epsilon (gene 1): -0.633291
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 14100 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 666.532
#> delta (gene 1): 0.742923
#> phi (cell 1): 0.72425
#> s (cell 1): 0.352714
#> nu (cell 1): 0.422282
#> theta (batch 1): 0.118876
#> betas:    0.4723  -0.0142   0.8127   0.8398   0.7228   0.5850   0.2291   0.1939   0.0478  -0.1011  -0.8544   0.4262
#> 
#> sigma: 0.156056
#> lambda (gene 1): 1.14294
#> epsilon (gene 1): -0.128702
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 14120 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 553.629
#> delta (gene 1): 0.631083
#> phi (cell 1): 0.711017
#> s (cell 1): 0.475392
#> nu (cell 1): 0.418163
#> theta (batch 1): 0.205163
#> betas:   -0.1486   0.0477   0.4787   1.8876   0.8851   0.7213   0.4514   0.2654  -0.0774   0.1320  -0.7469   0.2696
#> 
#> sigma: 0.187674
#> lambda (gene 1): 0.766697
#> epsilon (gene 1): -0.293078
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 14140 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 620.361
#> delta (gene 1): 0.573396
#> phi (cell 1): 0.772159
#> s (cell 1): 0.832146
#> nu (cell 1): 0.42719
#> theta (batch 1): 0.483845
#> betas:    1.4881  -0.2215   0.2349   0.4115   0.8128   0.6530  -0.0051   0.2511  -0.2434   0.2453  -0.2251  -0.1780
#> 
#> sigma: 0.129555
#> lambda (gene 1): 0.601325
#> epsilon (gene 1): -0.487867
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 14160 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 720.552
#> delta (gene 1): 0.616529
#> phi (cell 1): 0.731877
#> s (cell 1): 1.12857
#> nu (cell 1): 0.428612
#> theta (batch 1): 0.313827
#> betas:    0.7501  -0.0759   0.4408   1.1429   0.5022   0.5653   0.4143  -0.0437   0.1190  -0.2379  -0.5976   0.1853
#> 
#> sigma: 0.156244
#> lambda (gene 1): 2.20802
#> epsilon (gene 1): -0.174018
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 14180 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 686.238
#> delta (gene 1): 0.912102
#> phi (cell 1): 0.723864
#> s (cell 1): 0.337069
#> nu (cell 1): 0.426653
#> theta (batch 1): 0.108043
#> betas:    0.8771  -0.1435   1.3031   0.7504   0.6425   0.8391   0.1894   0.1508   0.5207  -0.4800  -0.1082   0.1243
#> 
#> sigma: 0.185916
#> lambda (gene 1): 2.16058
#> epsilon (gene 1): 0.131092
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 14200 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 662.618
#> delta (gene 1): 0.559394
#> phi (cell 1): 0.820455
#> s (cell 1): 0.276985
#> nu (cell 1): 0.423615
#> theta (batch 1): 0.459875
#> betas:    0.7507  -0.0900   0.4210   1.0669   1.0618   0.2285   0.2199   0.2960  -0.0020  -0.0460  -0.4309  -0.0478
#> 
#> sigma: 0.165855
#> lambda (gene 1): 0.519552
#> epsilon (gene 1): -0.414079
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 14220 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 691.274
#> delta (gene 1): 0.722229
#> phi (cell 1): 0.816749
#> s (cell 1): 0.37242
#> nu (cell 1): 0.422708
#> theta (batch 1): 0.175962
#> betas:    1.1455  -0.1831   0.4360   0.9568   0.4385   0.6576  -0.1040   0.4037   0.1726  -0.1748  -0.2654   0.1663
#> 
#> sigma: 0.143999
#> lambda (gene 1): 2.74445
#> epsilon (gene 1): -0.120511
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 14240 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 641.456
#> delta (gene 1): 0.703144
#> phi (cell 1): 0.821443
#> s (cell 1): 0.305702
#> nu (cell 1): 0.437129
#> theta (batch 1): 0.472722
#> betas:    1.1174  -0.1196   1.2995   0.4649   0.1887   0.8203   0.0598   0.1561  -0.2459   0.0874  -0.7532  -0.1933
#> 
#> sigma: 0.159971
#> lambda (gene 1): 1.61158
#> epsilon (gene 1): -0.00775681
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 14260 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 861.64
#> delta (gene 1): 0.700498
#> phi (cell 1): 0.818114
#> s (cell 1): 0.865755
#> nu (cell 1): 0.419851
#> theta (batch 1): 0.264569
#> betas:    0.9344  -0.1625   0.6359   0.7293   0.9325   0.7205   0.2310   0.0799  -0.0655   0.0446  -0.2451   0.4214
#> 
#> sigma: 0.180575
#> lambda (gene 1): 1.40997
#> epsilon (gene 1): -0.17393
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 14280 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 762.974
#> delta (gene 1): 0.622806
#> phi (cell 1): 0.705886
#> s (cell 1): 0.588537
#> nu (cell 1): 0.424448
#> theta (batch 1): 0.188714
#> betas:    1.3024  -0.0729   0.4621   0.6025   0.9234  -0.1873   0.5673  -0.0760  -0.3996  -0.1668  -0.7883  -0.3356
#> 
#> sigma: 0.171838
#> lambda (gene 1): 1.39667
#> epsilon (gene 1): -0.169748
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 14300 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 794.244
#> delta (gene 1): 0.785576
#> phi (cell 1): 0.675088
#> s (cell 1): 0.548812
#> nu (cell 1): 0.414448
#> theta (batch 1): 0.206465
#> betas:    0.8713  -0.0569   0.5828   0.5744   0.8389   0.6942  -0.2573   0.1846   0.3277  -0.6639  -0.1767  -0.4853
#> 
#> sigma: 0.144684
#> lambda (gene 1): 1.20939
#> epsilon (gene 1): -0.0418961
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 14320 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 865.94
#> delta (gene 1): 0.880374
#> phi (cell 1): 0.769147
#> s (cell 1): 0.284128
#> nu (cell 1): 0.410462
#> theta (batch 1): 0.265295
#> betas:    0.4143  -0.0138   1.0200   1.1556   0.3763   0.6607   0.4636  -0.1087   0.1057  -0.1619  -0.6393   0.0509
#> 
#> sigma: 0.155037
#> lambda (gene 1): 1.2036
#> epsilon (gene 1): 0.120291
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 14340 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 908.284
#> delta (gene 1): 0.869174
#> phi (cell 1): 0.755082
#> s (cell 1): 0.503844
#> nu (cell 1): 0.442454
#> theta (batch 1): 0.261158
#> betas:    0.0576   0.0507   0.2409   0.9240   1.0801   0.5262   0.3504   0.0248   0.2760  -0.6037   0.1137  -0.8104
#> 
#> sigma: 0.145438
#> lambda (gene 1): 1.16718
#> epsilon (gene 1): 0.0174343
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 14360 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 1079.6
#> delta (gene 1): 0.965986
#> phi (cell 1): 0.794565
#> s (cell 1): 0.403291
#> nu (cell 1): 0.411051
#> theta (batch 1): 0.190865
#> betas:    0.9964  -0.0659   0.3568   0.6044   0.7524   0.3808   0.3572  -0.0410  -0.0462  -0.2908  -0.6529  -0.0578
#> 
#> sigma: 0.140259
#> lambda (gene 1): 1.04787
#> epsilon (gene 1): 0.237264
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 14380 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 802.099
#> delta (gene 1): 1.07804
#> phi (cell 1): 0.758897
#> s (cell 1): 0.401201
#> nu (cell 1): 0.422335
#> theta (batch 1): 0.0273498
#> betas:    0.9650  -0.1668   0.6094   0.4220   1.1302   0.5087   0.2637   0.4977  -0.2594   0.3437  -0.5734   0.2480
#> 
#> sigma: 0.127066
#> lambda (gene 1): 0.52232
#> epsilon (gene 1): 0.295504
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 14400 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 754.324
#> delta (gene 1): 0.789597
#> phi (cell 1): 0.660142
#> s (cell 1): 0.403356
#> nu (cell 1): 0.417901
#> theta (batch 1): 0.00971846
#> betas:    1.0407  -0.0514   0.0700   0.7303   0.5244   0.4037   0.0609   0.1403  -0.0103  -0.3987  -0.3087  -0.4808
#> 
#> sigma: 0.21611
#> lambda (gene 1): 1.60613
#> epsilon (gene 1): -0.188879
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 14420 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 928.314
#> delta (gene 1): 0.818199
#> phi (cell 1): 0.597364
#> s (cell 1): 0.521872
#> nu (cell 1): 0.418171
#> theta (batch 1): 0.105751
#> betas:    0.8247  -0.1696   0.2312   1.0334   0.4754   0.9669   0.2362   0.3090   0.4165  -0.2060   0.1133  -0.2096
#> 
#> sigma: 0.151717
#> lambda (gene 1): 0.93925
#> epsilon (gene 1): -0.0634177
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 14440 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 532.64
#> delta (gene 1): 0.647369
#> phi (cell 1): 0.625548
#> s (cell 1): 0.619726
#> nu (cell 1): 0.438978
#> theta (batch 1): 0.220684
#> betas:    1.2784  -0.1892   0.7175   0.5452   0.8145   0.3543   0.2046   0.1698   0.1713  -0.1759  -0.3976   0.2785
#> 
#> sigma: 0.118702
#> lambda (gene 1): 1.01063
#> epsilon (gene 1): -0.212529
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 14460 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 707.643
#> delta (gene 1): 0.626368
#> phi (cell 1): 0.624103
#> s (cell 1): 0.604956
#> nu (cell 1): 0.428393
#> theta (batch 1): 0.480569
#> betas:    0.6276  -0.1081   0.7485   0.6160   0.7627   0.5260   0.5727   0.2539  -0.0090  -0.0707   0.1165  -0.2569
#> 
#> sigma: 0.131789
#> lambda (gene 1): 0.409877
#> epsilon (gene 1): -0.388445
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 14480 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 906.898
#> delta (gene 1): 0.526764
#> phi (cell 1): 0.677256
#> s (cell 1): 2.05764
#> nu (cell 1): 0.409831
#> theta (batch 1): 0.48167
#> betas:    0.7009  -0.0369   0.6556   0.6313   0.7138   0.5200   0.3902  -0.0799   0.0428  -0.0491  -0.0875  -0.9843
#> 
#> sigma: 0.160608
#> lambda (gene 1): 0.362755
#> epsilon (gene 1): -0.71912
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 14500 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 658.232
#> delta (gene 1): 0.529
#> phi (cell 1): 0.720633
#> s (cell 1): 0.575847
#> nu (cell 1): 0.424871
#> theta (batch 1): 0.415654
#> betas:    1.0381  -0.1828   0.4341   0.4326   1.0097   0.8036   0.0660   0.3946  -0.1625   0.2213  -0.6082   0.3152
#> 
#> sigma: 0.168999
#> lambda (gene 1): 0.772173
#> epsilon (gene 1): -0.289451
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 14520 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 731.091
#> delta (gene 1): 0.487379
#> phi (cell 1): 0.766848
#> s (cell 1): 0.675488
#> nu (cell 1): 0.431388
#> theta (batch 1): 0.203537
#> betas:    1.4444  -0.2450   0.8309   0.5716   0.3909   0.8124   0.2542  -0.0223   0.5024  -0.6174   0.5167  -0.2730
#> 
#> sigma: 0.18603
#> lambda (gene 1): 0.0837789
#> epsilon (gene 1): -0.565122
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 14540 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 686.747
#> delta (gene 1): 0.697023
#> phi (cell 1): 0.914559
#> s (cell 1): 0.329673
#> nu (cell 1): 0.429238
#> theta (batch 1): 0.440471
#> betas:    1.3590  -0.0588   0.0315   0.7373   0.5965   0.4086  -0.2708   0.2784  -0.2003  -0.6064  -0.4474  -0.4122
#> 
#> sigma: 0.17321
#> lambda (gene 1): 0.297673
#> epsilon (gene 1): -0.184453
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 14560 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 647.142
#> delta (gene 1): 0.859274
#> phi (cell 1): 0.925754
#> s (cell 1): 0.395363
#> nu (cell 1): 0.413979
#> theta (batch 1): 0.276132
#> betas:    0.6645  -0.0920   0.1679   1.4120   0.3843   0.7515   0.5433  -0.4071   0.8085  -0.4636  -0.1262  -0.4564
#> 
#> sigma: 0.167766
#> lambda (gene 1): 1.9112
#> epsilon (gene 1): 0.0279031
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 14580 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 744.166
#> delta (gene 1): 0.605687
#> phi (cell 1): 0.876861
#> s (cell 1): 0.709601
#> nu (cell 1): 0.413092
#> theta (batch 1): 0.16913
#> betas:    0.7247  -0.1006   0.9819   0.3224   1.0603   0.2499   0.8380  -0.1893   0.1509  -0.2620   0.0183  -0.5274
#> 
#> sigma: 0.126265
#> lambda (gene 1): 0.181858
#> epsilon (gene 1): -0.24333
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 14600 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 947.177
#> delta (gene 1): 0.619412
#> phi (cell 1): 0.854459
#> s (cell 1): 0.445577
#> nu (cell 1): 0.427513
#> theta (batch 1): 0.323994
#> betas:    0.6672   0.0121   0.2559   1.0516   0.7308   0.3538   0.4316  -0.2028  -0.2446  -0.1998  -0.5419  -0.4630
#> 
#> sigma: 0.197764
#> lambda (gene 1): 0.554432
#> epsilon (gene 1): -0.293731
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 14620 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 592.383
#> delta (gene 1): 0.894875
#> phi (cell 1): 0.824539
#> s (cell 1): 0.236201
#> nu (cell 1): 0.423255
#> theta (batch 1): 0.286583
#> betas:    0.3126   0.0091   0.3648   1.3319   0.7966   0.5197   0.3895   0.0886   0.1840  -0.3865  -0.4537  -0.0351
#> 
#> sigma: 0.165821
#> lambda (gene 1): 1.35192
#> epsilon (gene 1): 0.103877
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 14640 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 797.81
#> delta (gene 1): 0.754329
#> phi (cell 1): 0.913481
#> s (cell 1): 0.373687
#> nu (cell 1): 0.426386
#> theta (batch 1): 0.150238
#> betas:    1.3771  -0.1287   0.5023   0.3110   0.7669   0.2532   0.3264   0.0247  -0.1275  -0.0286  -0.4592  -0.1490
#> 
#> sigma: 0.106667
#> lambda (gene 1): 0.958757
#> epsilon (gene 1): -0.31487
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 14660 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 700.305
#> delta (gene 1): 0.916123
#> phi (cell 1): 0.918616
#> s (cell 1): 0.342122
#> nu (cell 1): 0.427314
#> theta (batch 1): 0.117058
#> betas:    0.7735  -0.0962   0.7953   0.8284   0.4036   0.7504   0.4568   0.0850   0.0655   0.0567  -0.7743   0.4343
#> 
#> sigma: 0.1265
#> lambda (gene 1): 2.12182
#> epsilon (gene 1): 0.108017
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 14680 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 632.641
#> delta (gene 1): 0.756782
#> phi (cell 1): 0.928128
#> s (cell 1): 0.46447
#> nu (cell 1): 0.422748
#> theta (batch 1): 0.00819531
#> betas:    1.0385  -0.0514   0.5558   0.8826  -0.2015   1.1345   0.0054   0.1765  -0.3538  -0.0775  -0.3634  -0.6966
#> 
#> sigma: 0.196224
#> lambda (gene 1): 1.01932
#> epsilon (gene 1): -0.228537
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 14700 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 615.618
#> delta (gene 1): 0.624361
#> phi (cell 1): 0.887394
#> s (cell 1): 0.423878
#> nu (cell 1): 0.425512
#> theta (batch 1): 0.00684581
#> betas:    1.3501  -0.1398   1.1788   0.4375   0.1968   0.6581   0.1626   0.0134   0.1290  -0.6725   0.2763  -0.6893
#> 
#> sigma: 0.155231
#> lambda (gene 1): 0.503846
#> epsilon (gene 1): -0.324812
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 14720 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 921.797
#> delta (gene 1): 0.928119
#> phi (cell 1): 0.754262
#> s (cell 1): 0.429749
#> nu (cell 1): 0.411987
#> theta (batch 1): 0.00258292
#> betas:    0.9753  -0.1306   1.2766   0.7011   0.3027   0.9355   0.2583   0.1369   0.0400   0.1498  -0.2906  -0.2643
#> 
#> sigma: 0.225932
#> lambda (gene 1): 0.295539
#> epsilon (gene 1): -0.0976409
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 14740 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 629.403
#> delta (gene 1): 0.659262
#> phi (cell 1): 0.916312
#> s (cell 1): 0.414094
#> nu (cell 1): 0.414179
#> theta (batch 1): 0.087729
#> betas:    1.2517  -0.0650   0.2499   0.8960   0.1243   0.4726   0.1411   0.1091  -0.1813  -0.4823  -0.5232  -0.4209
#> 
#> sigma: 0.213549
#> lambda (gene 1): 1.57471
#> epsilon (gene 1): -0.145553
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 14760 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 855.481
#> delta (gene 1): 0.82819
#> phi (cell 1): 0.841215
#> s (cell 1): 0.3198
#> nu (cell 1): 0.410269
#> theta (batch 1): 0.303421
#> betas:    0.9336  -0.0498   0.9964   0.7895   0.1069   0.5366   0.5556  -0.5296   0.0949  -0.2823  -0.2748  -0.6167
#> 
#> sigma: 0.157608
#> lambda (gene 1): 0.788704
#> epsilon (gene 1): -0.0908931
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 14780 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 504.559
#> delta (gene 1): 0.962755
#> phi (cell 1): 0.819233
#> s (cell 1): 0.440342
#> nu (cell 1): 0.422235
#> theta (batch 1): 0.564705
#> betas:    0.5117  -0.0228   0.5248   1.0058   0.5770   0.9822   0.0240   0.2111  -0.1815  -0.0185  -0.5529  -0.0503
#> 
#> sigma: 0.154594
#> lambda (gene 1): 1.35483
#> epsilon (gene 1): 0.12647
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 14800 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 889.463
#> delta (gene 1): 0.699815
#> phi (cell 1): 0.806698
#> s (cell 1): 1.02458
#> nu (cell 1): 0.42213
#> theta (batch 1): 0.430877
#> betas:    1.0076  -0.1612   0.4049   0.8475   0.2535   0.8382   0.2224   0.4250  -0.0375  -0.1637  -0.2746   0.2902
#> 
#> sigma: 0.176057
#> lambda (gene 1): 1.34146
#> epsilon (gene 1): -0.079543
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 14820 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 594.147
#> delta (gene 1): 0.582771
#> phi (cell 1): 0.793596
#> s (cell 1): 0.609179
#> nu (cell 1): 0.420863
#> theta (batch 1): 0.417313
#> betas:    0.3142  -0.1083   0.9203   0.6934   0.9799   0.7209   0.9032   0.1466   0.1219  -0.0207  -0.1584   0.4606
#> 
#> sigma: 0.169638
#> lambda (gene 1): 0.233385
#> epsilon (gene 1): -0.269463
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 14840 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 738.066
#> delta (gene 1): 0.973441
#> phi (cell 1): 0.792911
#> s (cell 1): 0.39347
#> nu (cell 1): 0.408744
#> theta (batch 1): 0.659388
#> betas:    0.6249  -0.0196   0.6726   0.9079   0.8293  -0.0344   0.8393  -0.2163  -0.0280  -0.1423  -0.3994  -0.4452
#> 
#> sigma: 0.152529
#> lambda (gene 1): 1.57571
#> epsilon (gene 1): 0.0896808
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 14860 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 577.615
#> delta (gene 1): 0.742123
#> phi (cell 1): 0.835147
#> s (cell 1): 2.2995
#> nu (cell 1): 0.432402
#> theta (batch 1): 0.658455
#> betas:    1.0309  -0.1400   0.6770   0.3727   1.2032   0.1139   0.3460   0.2247  -0.0298  -0.1059  -0.3148  -0.0751
#> 
#> sigma: 0.144354
#> lambda (gene 1): 1.45493
#> epsilon (gene 1): -0.070939
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 14880 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 725.978
#> delta (gene 1): 0.943316
#> phi (cell 1): 0.818702
#> s (cell 1): 0.42897
#> nu (cell 1): 0.432789
#> theta (batch 1): 0.668368
#> betas:    0.6513  -0.0704   0.2069   0.8370   0.6459   0.3406   0.9143  -0.2372   0.0764   0.2770  -0.6363  -0.3040
#> 
#> sigma: 0.165549
#> lambda (gene 1): 3.00449
#> epsilon (gene 1): 0.0251229
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 14900 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 714.003
#> delta (gene 1): 0.893468
#> phi (cell 1): 0.697605
#> s (cell 1): 0.312047
#> nu (cell 1): 0.42799
#> theta (batch 1): 0.419937
#> betas:    1.2443  -0.1637   0.7849   0.6943   0.9438   0.0577   0.7196  -0.0574   0.1138  -0.2810  -0.2836   0.0133
#> 
#> sigma: 0.144329
#> lambda (gene 1): 1.2546
#> epsilon (gene 1): 0.138027
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 14920 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 497.35
#> delta (gene 1): 0.640009
#> phi (cell 1): 0.709636
#> s (cell 1): 0.194999
#> nu (cell 1): 0.422915
#> theta (batch 1): 0.350329
#> betas:    1.1578  -0.1767   0.0681   1.1435   0.2547   0.7241   0.0861   0.1748   0.5950  -0.7076  -0.0594   0.1241
#> 
#> sigma: 0.165198
#> lambda (gene 1): 1.10882
#> epsilon (gene 1): -0.142664
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 14940 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 586.075
#> delta (gene 1): 0.715551
#> phi (cell 1): 0.765597
#> s (cell 1): 0.581674
#> nu (cell 1): 0.413508
#> theta (batch 1): 0.293895
#> betas:    0.4742  -0.0396   1.2816   1.1740   0.3903   0.5845   0.2804   0.2358   0.3158  -0.7720   0.0676  -0.2268
#> 
#> sigma: 0.170395
#> lambda (gene 1): 0.407918
#> epsilon (gene 1): -0.0285883
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 14960 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 753.955
#> delta (gene 1): 0.738074
#> phi (cell 1): 0.741529
#> s (cell 1): 0.397455
#> nu (cell 1): 0.416191
#> theta (batch 1): 0.408387
#> betas:    0.5754   0.0005   0.3671   1.5614   0.5014   0.4416   0.1301   0.2907  -0.1212  -0.5144   0.1647  -0.6216
#> 
#> sigma: 0.270966
#> lambda (gene 1): 1.17974
#> epsilon (gene 1): -0.303176
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 14980 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 705.473
#> delta (gene 1): 0.65927
#> phi (cell 1): 0.787821
#> s (cell 1): 0.715489
#> nu (cell 1): 0.413041
#> theta (batch 1): 0.334791
#> betas:    0.4388  -0.0699   0.8858   1.1196   0.3115   0.7505   0.5663   0.1224   0.2321  -0.4008   0.0558  -0.1744
#> 
#> sigma: 0.152495
#> lambda (gene 1): 1.70543
#> epsilon (gene 1): -0.181103
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 15000 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 555.31
#> delta (gene 1): 0.678109
#> phi (cell 1): 0.844458
#> s (cell 1): 0.632795
#> nu (cell 1): 0.424068
#> theta (batch 1): 0.2736
#> betas:    0.5757   0.0382   0.7866   0.7602   0.9614   0.4490  -0.0234   0.1680  -0.1178  -0.4558  -0.4548  -0.5312
#> 
#> sigma: 0.178018
#> lambda (gene 1): 0.754529
#> epsilon (gene 1): -0.22266
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 15020 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 719.487
#> delta (gene 1): 0.771337
#> phi (cell 1): 0.798033
#> s (cell 1): 0.332166
#> nu (cell 1): 0.419443
#> theta (batch 1): 0.448921
#> betas:    0.8416  -0.1025   0.9731   0.4650   0.5599   0.5859   0.7936  -0.2545   0.0964  -0.2618  -0.3053   0.2197
#> 
#> sigma: 0.134533
#> lambda (gene 1): 0.320329
#> epsilon (gene 1): -0.0274032
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 15040 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 555.996
#> delta (gene 1): 1.02821
#> phi (cell 1): 0.837344
#> s (cell 1): 0.283773
#> nu (cell 1): 0.419748
#> theta (batch 1): 0.297311
#> betas:    0.1833   0.1036   0.7177   0.8960   0.8655   0.5330   0.4723  -0.1491  -0.2280  -0.2855  -0.7356  -0.5574
#> 
#> sigma: 0.202035
#> lambda (gene 1): 0.91132
#> epsilon (gene 1): 0.324609
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 15060 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 713.897
#> delta (gene 1): 0.818418
#> phi (cell 1): 0.786456
#> s (cell 1): 1.4822
#> nu (cell 1): 0.424285
#> theta (batch 1): 0.264715
#> betas:    0.5913   0.0458   0.3034   0.9640   0.7090   0.2713  -0.0126   0.1380  -0.1398  -0.3398  -0.8258  -0.6638
#> 
#> sigma: 0.16687
#> lambda (gene 1): 2.2439
#> epsilon (gene 1): 0.126519
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 15080 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 1026.59
#> delta (gene 1): 0.59179
#> phi (cell 1): 0.801528
#> s (cell 1): 0.709813
#> nu (cell 1): 0.417031
#> theta (batch 1): 0.15107
#> betas:    0.7240  -0.0415   0.7972   0.3975   0.6716   0.6103   0.1738   0.6675  -0.6327  -0.0261  -0.4739  -0.1571
#> 
#> sigma: 0.175583
#> lambda (gene 1): 2.08418
#> epsilon (gene 1): -0.277112
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 15100 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 562.1
#> delta (gene 1): 0.872174
#> phi (cell 1): 0.803547
#> s (cell 1): 2.69758
#> nu (cell 1): 0.425455
#> theta (batch 1): 0.445519
#> betas:    1.0623  -0.0521   0.7301   0.7561   0.3174   0.8511  -0.4051   0.5760  -0.6087  -0.0547  -0.5568  -0.5706
#> 
#> sigma: 0.130327
#> lambda (gene 1): 3.24157
#> epsilon (gene 1): 0.0781875
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 15120 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 689.391
#> delta (gene 1): 0.751753
#> phi (cell 1): 0.820584
#> s (cell 1): 0.513854
#> nu (cell 1): 0.416334
#> theta (batch 1): 0.0763027
#> betas:    0.5618  -0.0261   0.0035   1.3121   0.4243   0.9291  -0.0163   0.2576   0.0106  -0.3914  -0.3521  -0.3178
#> 
#> sigma: 0.200721
#> lambda (gene 1): 2.21875
#> epsilon (gene 1): 0.0140393
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 15140 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 742.079
#> delta (gene 1): 0.910525
#> phi (cell 1): 0.803777
#> s (cell 1): 0.451196
#> nu (cell 1): 0.417733
#> theta (batch 1): 0.213911
#> betas:    1.0281  -0.1184   0.4992   1.2076   0.2352   0.8314   0.1034   0.0212   0.2391  -0.1662  -0.3152  -0.4291
#> 
#> sigma: 0.169366
#> lambda (gene 1): 0.865871
#> epsilon (gene 1): 0.0313577
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 15160 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 648.123
#> delta (gene 1): 0.726995
#> phi (cell 1): 0.783798
#> s (cell 1): 0.200374
#> nu (cell 1): 0.427209
#> theta (batch 1): 0.308729
#> betas:    2.0937  -0.0585   0.5125   0.4566  -0.1655   0.4102  -0.4187  -0.5001  -0.2155  -0.6886  -0.9166  -0.5557
#> 
#> sigma: 0.237032
#> lambda (gene 1): 0.167034
#> epsilon (gene 1): -0.218108
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 15180 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 610.911
#> delta (gene 1): 0.653261
#> phi (cell 1): 0.841581
#> s (cell 1): 0.320155
#> nu (cell 1): 0.423524
#> theta (batch 1): 0.532325
#> betas:    0.5984   0.0552   1.2852   0.1138   1.0975   0.3663  -0.0767   0.0499  -0.0841  -0.3076  -0.5626  -0.8471
#> 
#> sigma: 0.116804
#> lambda (gene 1): 1.3
#> epsilon (gene 1): -0.363365
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 15200 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 666.292
#> delta (gene 1): 0.718768
#> phi (cell 1): 0.856399
#> s (cell 1): 0.266642
#> nu (cell 1): 0.405113
#> theta (batch 1): 0.44523
#> betas:    0.5479  -0.0533   1.2055   0.8770   0.6865   0.5333   0.5710   0.1783   0.0575  -0.3698  -0.0762  -0.4448
#> 
#> sigma: 0.141967
#> lambda (gene 1): 1.11124
#> epsilon (gene 1): -0.064053
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 15220 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 564.573
#> delta (gene 1): 0.464986
#> phi (cell 1): 0.755963
#> s (cell 1): 0.744767
#> nu (cell 1): 0.443796
#> theta (batch 1): 0.175271
#> betas:    1.1367  -0.1456   0.4602   0.8021   0.6052   0.7805   0.1774   0.0394   0.0817  -0.1647  -0.4941   0.0883
#> 
#> sigma: 0.156387
#> lambda (gene 1): 0.308405
#> epsilon (gene 1): -0.488279
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 15240 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 559.584
#> delta (gene 1): 0.691387
#> phi (cell 1): 0.805005
#> s (cell 1): 0.455848
#> nu (cell 1): 0.424559
#> theta (batch 1): 0.0505925
#> betas:    1.6738  -0.1999   0.4635   0.8110   0.4713   0.1770   0.3463   0.0099   0.0773  -0.6161  -0.0622  -0.3860
#> 
#> sigma: 0.119619
#> lambda (gene 1): 0.998961
#> epsilon (gene 1): -0.00422949
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 15260 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 636.027
#> delta (gene 1): 0.692643
#> phi (cell 1): 0.685428
#> s (cell 1): 0.529
#> nu (cell 1): 0.435962
#> theta (batch 1): 0.0386993
#> betas:    1.2205  -0.0614   1.0644   0.5840   0.2455  -0.0463   0.8754  -0.5921   0.1032  -0.5800  -0.2941  -0.6434
#> 
#> sigma: 0.167053
#> lambda (gene 1): 0.875668
#> epsilon (gene 1): -0.162005
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 15280 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 630.862
#> delta (gene 1): 0.684959
#> phi (cell 1): 0.673791
#> s (cell 1): 0.519596
#> nu (cell 1): 0.423544
#> theta (batch 1): 0.0189579
#> betas:    0.1745   0.0936   0.5068   0.8710   0.9905   0.5397   0.1452   0.0517   0.0344  -0.2191  -0.8080  -0.5978
#> 
#> sigma: 0.125006
#> lambda (gene 1): 1.18407
#> epsilon (gene 1): -0.207003
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 15300 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 687.707
#> delta (gene 1): 0.91156
#> phi (cell 1): 0.710617
#> s (cell 1): 0.528644
#> nu (cell 1): 0.438215
#> theta (batch 1): 0.0116283
#> betas:    0.1961   0.0414   0.4070   1.0307   1.2771   0.1310   0.1248   0.4321  -0.1904  -0.3821  -0.0444  -0.7812
#> 
#> sigma: 0.184618
#> lambda (gene 1): 1.87482
#> epsilon (gene 1): 0.105561
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 15320 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 627.397
#> delta (gene 1): 0.833226
#> phi (cell 1): 0.868293
#> s (cell 1): 0.493762
#> nu (cell 1): 0.41429
#> theta (batch 1): 0.0217488
#> betas:    1.1920  -0.1165   0.0280   1.1662   0.6692   0.2455   0.2284   0.1183  -0.0369  -0.2947  -0.4393  -0.1243
#> 
#> sigma: 0.132322
#> lambda (gene 1): 1.56692
#> epsilon (gene 1): 0.0558107
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 15340 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 733.49
#> delta (gene 1): 1.0496
#> phi (cell 1): 0.793283
#> s (cell 1): 0.420766
#> nu (cell 1): 0.414857
#> theta (batch 1): 0.011726
#> betas:    0.8234  -0.0843   0.0406   0.9960   0.5628   0.5265   0.4727  -0.0743   0.2024  -0.2468  -0.4425  -0.1003
#> 
#> sigma: 0.183691
#> lambda (gene 1): 0.359746
#> epsilon (gene 1): 0.264883
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 15360 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 619.337
#> delta (gene 1): 0.757347
#> phi (cell 1): 0.687813
#> s (cell 1): 0.374504
#> nu (cell 1): 0.428542
#> theta (batch 1): 0.0119357
#> betas:    0.9520   0.1358   0.6549   0.8678   0.1239   0.5388   0.1540  -1.1899   0.5451  -0.6317  -1.3172  -0.8926
#> 
#> sigma: 0.218078
#> lambda (gene 1): 0.499119
#> epsilon (gene 1): -0.348827
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 15380 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 683.32
#> delta (gene 1): 0.87307
#> phi (cell 1): 0.67927
#> s (cell 1): 0.448715
#> nu (cell 1): 0.441714
#> theta (batch 1): 0.00808839
#> betas:    1.1033  -0.1035   0.9079  -0.0076   1.1297  -0.0330   0.7625  -0.0814  -0.1240  -0.3909  -0.0189  -0.7655
#> 
#> sigma: 0.165939
#> lambda (gene 1): 0.729187
#> epsilon (gene 1): 0.147641
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 15400 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 654.264
#> delta (gene 1): 0.903346
#> phi (cell 1): 0.77494
#> s (cell 1): 0.373347
#> nu (cell 1): 0.420132
#> theta (batch 1): 0.0299493
#> betas:    0.2490  -0.0067   1.0894   0.8329   0.6341   0.8684   0.2119   0.1010   0.2935  -0.3950   0.0717  -0.6027
#> 
#> sigma: 0.138011
#> lambda (gene 1): 0.869483
#> epsilon (gene 1): -0.0132514
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 15420 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 689.636
#> delta (gene 1): 0.616166
#> phi (cell 1): 0.777923
#> s (cell 1): 0.393554
#> nu (cell 1): 0.408598
#> theta (batch 1): 0.0533282
#> betas:    0.8452  -0.0744   0.1911   1.0607   0.4904   0.2162   0.6045  -0.0426   0.0723  -0.4655  -0.4726   0.1486
#> 
#> sigma: 0.155831
#> lambda (gene 1): 1.86932
#> epsilon (gene 1): -0.113615
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 15440 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 742.927
#> delta (gene 1): 0.744674
#> phi (cell 1): 0.72771
#> s (cell 1): 0.269878
#> nu (cell 1): 0.424811
#> theta (batch 1): 0.246519
#> betas:    0.9299  -0.0059   0.2248   1.0045   0.2756   0.5585   0.2083  -0.1656  -0.1470  -0.5796  -0.4568  -0.3651
#> 
#> sigma: 0.14463
#> lambda (gene 1): 2.0254
#> epsilon (gene 1): -0.0319382
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 15460 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 739.158
#> delta (gene 1): 0.556252
#> phi (cell 1): 0.749464
#> s (cell 1): 0.766822
#> nu (cell 1): 0.430815
#> theta (batch 1): 0.332013
#> betas:    1.4212  -0.2056   0.2099   0.3130   0.7775   0.7833  -0.0501   0.2991  -0.0042  -0.0856  -0.0632  -0.1210
#> 
#> sigma: 0.17614
#> lambda (gene 1): 0.660298
#> epsilon (gene 1): -0.532313
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 15480 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 690.922
#> delta (gene 1): 0.623474
#> phi (cell 1): 0.765048
#> s (cell 1): 0.56681
#> nu (cell 1): 0.412928
#> theta (batch 1): 0.310807
#> betas:    1.3095  -0.2884   0.8476   0.2114   0.8406   0.7288   0.2394   0.4205   0.2475   0.0478   0.1644   0.0986
#> 
#> sigma: 0.15491
#> lambda (gene 1): 1.26564
#> epsilon (gene 1): -0.324586
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 15500 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 639.166
#> delta (gene 1): 0.940448
#> phi (cell 1): 0.783198
#> s (cell 1): 0.486564
#> nu (cell 1): 0.408021
#> theta (batch 1): 0.147406
#> betas:    0.8664  -0.1111   0.7079   0.7019   0.6161   0.6866   0.0859   0.4937  -0.4359   0.0400  -0.3126  -0.3107
#> 
#> sigma: 0.136231
#> lambda (gene 1): 0.837235
#> epsilon (gene 1): 0.274593
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 15520 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 558.41
#> delta (gene 1): 0.670748
#> phi (cell 1): 0.863684
#> s (cell 1): 0.874819
#> nu (cell 1): 0.425045
#> theta (batch 1): 0.34779
#> betas:    0.3278   0.0482   0.6175   0.4299   1.3445   0.2842   0.3584  -0.0840   0.1234  -0.0322  -1.0909  -0.1568
#> 
#> sigma: 0.175962
#> lambda (gene 1): 0.0986349
#> epsilon (gene 1): -0.213569
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 15540 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 670.264
#> delta (gene 1): 1.08229
#> phi (cell 1): 0.765809
#> s (cell 1): 0.375202
#> nu (cell 1): 0.432051
#> theta (batch 1): 0.318819
#> betas:    1.1445  -0.2361  -0.1196   0.9482   0.3556   1.1364  -0.0374   0.6350   0.1497  -0.1045   0.0217   0.2116
#> 
#> sigma: 0.186055
#> lambda (gene 1): 1.80609
#> epsilon (gene 1): 0.298394
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 15560 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 811.014
#> delta (gene 1): 0.573563
#> phi (cell 1): 0.736434
#> s (cell 1): 0.709578
#> nu (cell 1): 0.428018
#> theta (batch 1): 0.0409461
#> betas:    0.9209  -0.0623   0.7681   0.4557   0.2009   1.0916   0.1032   0.1128  -0.2190  -0.2763   0.0135  -0.8235
#> 
#> sigma: 0.169432
#> lambda (gene 1): 0.780909
#> epsilon (gene 1): -0.44583
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 15580 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 650.729
#> delta (gene 1): 0.890201
#> phi (cell 1): 0.66204
#> s (cell 1): 0.40724
#> nu (cell 1): 0.437704
#> theta (batch 1): 0.0452682
#> betas:    0.4135  -0.0145   1.1173   0.7807   0.8237   0.2469   0.7542  -0.0366  -0.3645   0.5183  -0.8085  -0.2265
#> 
#> sigma: 0.196501
#> lambda (gene 1): 1.42548
#> epsilon (gene 1): -0.0492461
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 15600 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 817.766
#> delta (gene 1): 0.642659
#> phi (cell 1): 0.817401
#> s (cell 1): 0.391794
#> nu (cell 1): 0.426214
#> theta (batch 1): 0.0436883
#> betas:    1.1339  -0.0593   0.5096   0.7546   0.4544   0.4966   0.0760   0.1526  -0.3524  -0.3510  -0.5879  -0.2434
#> 
#> sigma: 0.12726
#> lambda (gene 1): 2.02469
#> epsilon (gene 1): -0.120363
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 15620 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 696.051
#> delta (gene 1): 0.712786
#> phi (cell 1): 0.83826
#> s (cell 1): 0.440338
#> nu (cell 1): 0.405209
#> theta (batch 1): 0.0163429
#> betas:    0.5698  -0.0108   1.0006   0.9923   0.8751   0.4963   0.1016   0.5663  -0.4997   0.0229  -0.2144  -0.9681
#> 
#> sigma: 0.172243
#> lambda (gene 1): 0.558912
#> epsilon (gene 1): -0.213937
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 15640 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 763.664
#> delta (gene 1): 0.696775
#> phi (cell 1): 0.907001
#> s (cell 1): 0.440104
#> nu (cell 1): 0.429214
#> theta (batch 1): 0.00456894
#> betas:    0.9192  -0.1919   0.5770   0.8874   0.5139   0.7720   0.3696   0.6759  -0.2455   0.0975  -0.0425   0.1098
#> 
#> sigma: 0.131416
#> lambda (gene 1): 0.695943
#> epsilon (gene 1): -0.0986857
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 15660 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 680.573
#> delta (gene 1): 0.599335
#> phi (cell 1): 0.92232
#> s (cell 1): 0.467965
#> nu (cell 1): 0.421835
#> theta (batch 1): 0.0147735
#> betas:    1.0422  -0.2594   1.1852   0.5889   0.6916   0.4112   1.1066  -0.1984   0.6576  -0.1638   0.3429   0.1970
#> 
#> sigma: 0.181699
#> lambda (gene 1): 1.54945
#> epsilon (gene 1): -0.407989
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 15680 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 666.816
#> delta (gene 1): 0.826257
#> phi (cell 1): 0.861388
#> s (cell 1): 0.418902
#> nu (cell 1): 0.414069
#> theta (batch 1): 0.0319227
#> betas:    0.5479  -0.1534   0.8366   0.7728   0.6775   0.8577   0.7329   0.5483  -0.3873   0.4023   0.1841  -0.4103
#> 
#> sigma: 0.198359
#> lambda (gene 1): 1.34119
#> epsilon (gene 1): -0.0309974
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 15700 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 820.675
#> delta (gene 1): 0.647314
#> phi (cell 1): 0.770763
#> s (cell 1): 0.506113
#> nu (cell 1): 0.423498
#> theta (batch 1): 0.0455412
#> betas:    0.8625  -0.0560   0.7964   0.8689   0.5780   0.5482   0.1883   0.4162  -0.3684  -0.2277  -0.3457  -0.5728
#> 
#> sigma: 0.132114
#> lambda (gene 1): 1.08554
#> epsilon (gene 1): -0.124233
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 15720 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 696.328
#> delta (gene 1): 0.530741
#> phi (cell 1): 0.831244
#> s (cell 1): 0.48869
#> nu (cell 1): 0.435364
#> theta (batch 1): 0.345468
#> betas:    1.0040  -0.0150   0.0758   0.2924   0.5041   0.7146   0.0501   0.2137  -0.4710  -0.3933  -0.4621  -0.6949
#> 
#> sigma: 0.139208
#> lambda (gene 1): 0.375661
#> epsilon (gene 1): -0.334181
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 15740 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 710.787
#> delta (gene 1): 0.643936
#> phi (cell 1): 0.835858
#> s (cell 1): 1.14473
#> nu (cell 1): 0.415574
#> theta (batch 1): 0.373669
#> betas:    0.9841   0.0255   1.1254   0.2910   0.5411   0.2842  -0.0430   0.1164  -0.2175  -0.8155  -0.4090  -0.6912
#> 
#> sigma: 0.146286
#> lambda (gene 1): 0.919342
#> epsilon (gene 1): -0.151338
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 15760 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 752.406
#> delta (gene 1): 0.973897
#> phi (cell 1): 0.779555
#> s (cell 1): 0.426447
#> nu (cell 1): 0.430394
#> theta (batch 1): 0.154287
#> betas:    0.6716  -0.0936   0.4584   1.0143   0.6143   0.4487   0.3968   0.5318  -0.0477  -0.4025   0.3514  -0.5447
#> 
#> sigma: 0.180211
#> lambda (gene 1): 1.01974
#> epsilon (gene 1): 0.119882
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 15780 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 904.975
#> delta (gene 1): 1.06166
#> phi (cell 1): 0.738941
#> s (cell 1): 0.5151
#> nu (cell 1): 0.425562
#> theta (batch 1): 0.0959608
#> betas:    1.2280  -0.1469   0.3143   1.1316   0.4591  -0.0476   0.7285   0.2460  -0.3980  -0.2828  -0.0091  -0.3239
#> 
#> sigma: 0.163562
#> lambda (gene 1): 0.778761
#> epsilon (gene 1): 0.373623
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 15800 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 713.858
#> delta (gene 1): 0.730706
#> phi (cell 1): 0.800513
#> s (cell 1): 0.312975
#> nu (cell 1): 0.418593
#> theta (batch 1): 0.0937625
#> betas:    0.8909  -0.0774   1.1677   0.6450   0.4127   0.6426   0.5345  -0.1429  -0.0915   0.0882  -0.6070  -0.3332
#> 
#> sigma: 0.180608
#> lambda (gene 1): 0.875363
#> epsilon (gene 1): -0.148048
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 15820 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 575.69
#> delta (gene 1): 0.90383
#> phi (cell 1): 0.853281
#> s (cell 1): 0.400863
#> nu (cell 1): 0.412413
#> theta (batch 1): 0.263566
#> betas:    1.2385  -0.2248   0.0697   0.6322   0.5807   0.7406   0.2469   0.3716  -0.4866   0.6327  -0.1890  -0.3211
#> 
#> sigma: 0.174926
#> lambda (gene 1): 0.375628
#> epsilon (gene 1): -0.00927665
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 15840 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 641.782
#> delta (gene 1): 0.750737
#> phi (cell 1): 0.710604
#> s (cell 1): 0.446025
#> nu (cell 1): 0.426908
#> theta (batch 1): 0.374801
#> betas:    1.3010  -0.1055   0.6611  -0.0181   1.0540   0.1864  -0.1149   0.1598   0.2119  -0.4673  -0.5699  -0.3928
#> 
#> sigma: 0.160586
#> lambda (gene 1): 0.931936
#> epsilon (gene 1): -0.0394556
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 15860 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 833.715
#> delta (gene 1): 0.73033
#> phi (cell 1): 0.691826
#> s (cell 1): 0.378263
#> nu (cell 1): 0.426304
#> theta (batch 1): 0.198956
#> betas:    1.0146  -0.0989   0.9063   0.2498   0.8730   0.3725   0.4683  -0.4668   0.3575  -0.5716  -0.1148  -0.2115
#> 
#> sigma: 0.200446
#> lambda (gene 1): 1.05674
#> epsilon (gene 1): -0.103148
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 15880 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 574.531
#> delta (gene 1): 1.1702
#> phi (cell 1): 0.779548
#> s (cell 1): 0.639041
#> nu (cell 1): 0.436353
#> theta (batch 1): 0.272407
#> betas:    0.6348  -0.0829   0.1303   0.9278   0.6658   0.7468   0.4135  -0.0808   0.3282  -0.2468   0.0150  -0.4015
#> 
#> sigma: 0.163407
#> lambda (gene 1): 0.83308
#> epsilon (gene 1): 0.212774
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 15900 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 618.881
#> delta (gene 1): 0.632819
#> phi (cell 1): 0.802446
#> s (cell 1): 0.711017
#> nu (cell 1): 0.414276
#> theta (batch 1): 0.158207
#> betas:    1.2021  -0.0741   0.8897   0.3377   0.5093   0.8243  -0.1784  -0.0256   0.0461  -0.4245  -0.5603  -0.2574
#> 
#> sigma: 0.161038
#> lambda (gene 1): 1.31737
#> epsilon (gene 1): -0.262624
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 15920 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 885.877
#> delta (gene 1): 0.547628
#> phi (cell 1): 0.679452
#> s (cell 1): 0.612718
#> nu (cell 1): 0.438742
#> theta (batch 1): 0.126354
#> betas:    0.8354  -0.0838   1.0708   0.6883   0.8322   0.0950   0.5754  -0.3061   0.4566  -0.0913  -0.5274  -0.2201
#> 
#> sigma: 0.195624
#> lambda (gene 1): 0.446451
#> epsilon (gene 1): -0.574437
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 15940 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 689.519
#> delta (gene 1): 0.695382
#> phi (cell 1): 0.766546
#> s (cell 1): 0.325601
#> nu (cell 1): 0.432346
#> theta (batch 1): 0.189159
#> betas:    0.7816  -0.0301   0.4220   0.7807   0.4598   0.6503   0.1108   0.0934   0.0016  -0.5510  -0.2678  -0.4835
#> 
#> sigma: 0.108557
#> lambda (gene 1): 2.98972
#> epsilon (gene 1): -0.0769514
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 15960 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 750.047
#> delta (gene 1): 0.750594
#> phi (cell 1): 0.75115
#> s (cell 1): 0.312915
#> nu (cell 1): 0.415022
#> theta (batch 1): 0.292385
#> betas:    0.5288  -0.1328   1.3368   0.9071   0.8335   0.6054   0.5188   0.4110   0.2228  -0.1419  -0.0262   0.1302
#> 
#> sigma: 0.184712
#> lambda (gene 1): 2.7082
#> epsilon (gene 1): -0.0593757
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 15980 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 573.4
#> delta (gene 1): 0.863513
#> phi (cell 1): 0.799532
#> s (cell 1): 0.438015
#> nu (cell 1): 0.428986
#> theta (batch 1): 0.254066
#> betas:    0.9333  -0.0774   0.7627   0.1948   0.9980   0.3019   0.3037  -0.4511   0.7778  -0.6949  -0.4683  -0.0662
#> 
#> sigma: 0.127074
#> lambda (gene 1): 3.2957
#> epsilon (gene 1): 0.0825007
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 16000 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 785.034
#> delta (gene 1): 0.776245
#> phi (cell 1): 0.776147
#> s (cell 1): 0.246975
#> nu (cell 1): 0.421829
#> theta (batch 1): 0.148097
#> betas:    0.9563  -0.1126   0.1000   0.8062   0.6012   0.6793   0.3622  -0.0746   0.2454  -0.3739  -0.1712  -0.0667
#> 
#> sigma: 0.187489
#> lambda (gene 1): 0.928626
#> epsilon (gene 1): -0.0959246
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 16020 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 617.185
#> delta (gene 1): 1.14285
#> phi (cell 1): 0.770862
#> s (cell 1): 0.17198
#> nu (cell 1): 0.427162
#> theta (batch 1): 0.267318
#> betas:    0.5916  -0.0777   0.6948   0.6956   0.8967   0.6232   0.4233  -0.1843   0.3928  -0.3135  -0.2413   0.0854
#> 
#> sigma: 0.116209
#> lambda (gene 1): 0.721556
#> epsilon (gene 1): 0.297498
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 16040 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 667.796
#> delta (gene 1): 0.587363
#> phi (cell 1): 0.822265
#> s (cell 1): 0.479644
#> nu (cell 1): 0.411142
#> theta (batch 1): 0.0626132
#> betas:    0.8641  -0.0517   0.6665   0.5961   0.6126   0.7089   0.2459   0.2248  -0.2218  -0.2135  -0.5387  -0.3390
#> 
#> sigma: 0.126395
#> lambda (gene 1): 1.03211
#> epsilon (gene 1): -0.244266
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 16060 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 801.854
#> delta (gene 1): 0.636045
#> phi (cell 1): 0.882065
#> s (cell 1): 0.546111
#> nu (cell 1): 0.422566
#> theta (batch 1): 0.0518485
#> betas:    1.3187   0.0211   0.4602   0.4774   0.3849   0.2618   0.4262  -0.5437  -0.3407  -0.3536  -1.1365  -0.2518
#> 
#> sigma: 0.165906
#> lambda (gene 1): 0.879699
#> epsilon (gene 1): -0.299261
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 16080 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 667.062
#> delta (gene 1): 0.726323
#> phi (cell 1): 0.950391
#> s (cell 1): 0.495764
#> nu (cell 1): 0.414653
#> theta (batch 1): 0.07741
#> betas:    0.6541   0.0474   0.7035   0.6531   0.7705   0.6080  -0.1852   0.1118  -0.2585  -0.0096  -0.8713  -0.9113
#> 
#> sigma: 0.163248
#> lambda (gene 1): 1.26429
#> epsilon (gene 1): -0.200985
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 16100 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 682.434
#> delta (gene 1): 0.820916
#> phi (cell 1): 0.939085
#> s (cell 1): 0.729561
#> nu (cell 1): 0.427362
#> theta (batch 1): 0.110318
#> betas:    1.1525  -0.1157   0.0883   0.6142   0.6495   0.3742   0.4820  -0.1348  -0.0848  -0.2419  -0.2834  -0.4100
#> 
#> sigma: 0.109029
#> lambda (gene 1): 0.815369
#> epsilon (gene 1): 0.0626961
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 16120 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 699.889
#> delta (gene 1): 0.696868
#> phi (cell 1): 0.842416
#> s (cell 1): 0.502814
#> nu (cell 1): 0.411347
#> theta (batch 1): 0.152056
#> betas:    1.2423  -0.0750   0.9830   0.2314   0.6010   0.1876   0.3563  -0.5964   0.3833  -0.4836  -0.2933  -0.9200
#> 
#> sigma: 0.144189
#> lambda (gene 1): 0.920999
#> epsilon (gene 1): -0.266807
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 16140 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 609.763
#> delta (gene 1): 0.605304
#> phi (cell 1): 0.905192
#> s (cell 1): 0.513409
#> nu (cell 1): 0.408687
#> theta (batch 1): 0.0408714
#> betas:    1.0414  -0.1334   0.9086   0.8687   0.2729   0.5411   0.4380   0.2125   0.0396  -0.2697  -0.3270   0.0297
#> 
#> sigma: 0.126093
#> lambda (gene 1): 0.503372
#> epsilon (gene 1): -0.233487
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 16160 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 736.993
#> delta (gene 1): 0.656005
#> phi (cell 1): 0.792954
#> s (cell 1): 0.335445
#> nu (cell 1): 0.409348
#> theta (batch 1): 0.0361227
#> betas:    0.4800  -0.1483   0.6871   0.5706   1.4299   0.3744   0.4607   0.5276   0.0022   0.2549  -0.0841   0.1032
#> 
#> sigma: 0.191199
#> lambda (gene 1): 1.93969
#> epsilon (gene 1): -0.264242
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 16180 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 582.256
#> delta (gene 1): 0.60836
#> phi (cell 1): 0.698421
#> s (cell 1): 0.391055
#> nu (cell 1): 0.42364
#> theta (batch 1): 0.101099
#> betas:    0.5755  -0.0973   0.4946   0.6756   0.6695   0.4734   0.6789   0.4197  -0.3975   0.3249  -0.3661   0.2234
#> 
#> sigma: 0.138222
#> lambda (gene 1): 1.17527
#> epsilon (gene 1): -0.390155
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 16200 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 678.343
#> delta (gene 1): 0.545848
#> phi (cell 1): 0.670761
#> s (cell 1): 0.178897
#> nu (cell 1): 0.434506
#> theta (batch 1): 0.248358
#> betas:    1.1355  -0.1935   0.4082   0.4544   0.9300   0.4734   0.3834   0.2836  -0.0812  -0.0277  -0.2234   0.2046
#> 
#> sigma: 0.176138
#> lambda (gene 1): 0.754611
#> epsilon (gene 1): -0.337103
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 16220 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 697.694
#> delta (gene 1): 0.581588
#> phi (cell 1): 0.669181
#> s (cell 1): 0.558851
#> nu (cell 1): 0.437278
#> theta (batch 1): 0.270152
#> betas:    0.2021  -0.0709   0.6510   1.4831   0.6932   0.6413   0.9649  -0.3651   0.7844  -0.4570   0.0971  -0.1851
#> 
#> sigma: 0.16953
#> lambda (gene 1): 0.457956
#> epsilon (gene 1): -0.3042
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 16240 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 550.816
#> delta (gene 1): 0.685659
#> phi (cell 1): 0.644558
#> s (cell 1): 0.395518
#> nu (cell 1): 0.427717
#> theta (batch 1): 0.0337943
#> betas:    0.5390  -0.0221  -0.0667   1.2069   0.5624   1.1157  -0.2475  -0.0042   0.7352  -1.1175   0.0262  -0.2104
#> 
#> sigma: 0.155413
#> lambda (gene 1): 1.16177
#> epsilon (gene 1): -0.0866678
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 16260 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 726.262
#> delta (gene 1): 0.625319
#> phi (cell 1): 0.643227
#> s (cell 1): 0.400716
#> nu (cell 1): 0.420724
#> theta (batch 1): 0.0433578
#> betas:    0.9137   0.0038   0.5542   0.6517   0.5468   0.8169  -0.6452   0.4122  -0.0973  -0.4060  -0.8434  -0.5061
#> 
#> sigma: 0.13057
#> lambda (gene 1): 2.14035
#> epsilon (gene 1): -0.217424
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 16280 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 661.975
#> delta (gene 1): 0.566654
#> phi (cell 1): 0.7217
#> s (cell 1): 0.469021
#> nu (cell 1): 0.423168
#> theta (batch 1): 0.056913
#> betas:    1.0200  -0.1060   0.3330   1.0455   0.5358   0.2603   0.2166   0.0687   0.2864  -0.4742  -0.3574   0.0401
#> 
#> sigma: 0.132428
#> lambda (gene 1): 1.17381
#> epsilon (gene 1): -0.358208
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 16300 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 658.388
#> delta (gene 1): 0.567339
#> phi (cell 1): 0.724674
#> s (cell 1): 0.489045
#> nu (cell 1): 0.433919
#> theta (batch 1): 0.011267
#> betas:    0.6869  -0.0068   0.9343   0.2119   0.7395   0.8389  -0.1941   0.1428  -0.1928  -0.1971  -0.6346  -0.5359
#> 
#> sigma: 0.140564
#> lambda (gene 1): 2.52776
#> epsilon (gene 1): -0.27296
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 16320 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 601.457
#> delta (gene 1): 0.828709
#> phi (cell 1): 0.817529
#> s (cell 1): 0.415404
#> nu (cell 1): 0.416574
#> theta (batch 1): 0.0582005
#> betas:    1.4285  -0.1796   0.7394   0.7572  -0.1585   0.8863   0.5145  -0.3563   0.3364  -0.5573   0.0573  -0.2194
#> 
#> sigma: 0.170507
#> lambda (gene 1): 0.321901
#> epsilon (gene 1): -0.00928893
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 16340 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 770.344
#> delta (gene 1): 0.496774
#> phi (cell 1): 0.877467
#> s (cell 1): 0.429616
#> nu (cell 1): 0.41325
#> theta (batch 1): 0.0969568
#> betas:    0.8419  -0.0690   0.5802   0.8954   1.0341  -0.0303   0.9164  -0.5312   0.1738  -0.2730  -0.4822  -0.0799
#> 
#> sigma: 0.18511
#> lambda (gene 1): 1.32751
#> epsilon (gene 1): -0.451549
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 16360 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 569.759
#> delta (gene 1): 1.07631
#> phi (cell 1): 0.834764
#> s (cell 1): 0.374613
#> nu (cell 1): 0.419351
#> theta (batch 1): 0.204877
#> betas:    0.8579  -0.0679   0.4695   0.6698   0.3647   0.5408   0.6527  -0.3540   0.2968  -0.5396  -0.0412  -0.6670
#> 
#> sigma: 0.156706
#> lambda (gene 1): 1.01691
#> epsilon (gene 1): 0.288992
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 16380 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 698.5
#> delta (gene 1): 1.08867
#> phi (cell 1): 0.836616
#> s (cell 1): 0.463105
#> nu (cell 1): 0.422613
#> theta (batch 1): 0.266412
#> betas:    0.5197  -0.0665   0.5297   0.8927   0.9602   0.7447   0.2192   0.4187  -0.1386  -0.1919  -0.3241   0.0436
#> 
#> sigma: 0.139212
#> lambda (gene 1): 0.9848
#> epsilon (gene 1): 0.424651
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 16400 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 684.803
#> delta (gene 1): 0.530284
#> phi (cell 1): 0.892793
#> s (cell 1): 1.71913
#> nu (cell 1): 0.430789
#> theta (batch 1): 0.18835
#> betas:    0.3333   0.1250   0.8044   0.9245   0.1680   0.7851   0.3851  -0.3785  -0.1798  -0.3799  -0.9845  -0.4347
#> 
#> sigma: 0.102995
#> lambda (gene 1): 0.675569
#> epsilon (gene 1): -0.362294
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 16420 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 833.813
#> delta (gene 1): 0.67652
#> phi (cell 1): 0.8723
#> s (cell 1): 0.557243
#> nu (cell 1): 0.404995
#> theta (batch 1): 0.188278
#> betas:    0.8169  -0.0962   0.8079   0.6236   0.7673   0.6540   0.1686   0.2577   0.1113   0.2523  -1.0655   0.2075
#> 
#> sigma: 0.229491
#> lambda (gene 1): 0.753445
#> epsilon (gene 1): -0.201206
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 16440 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 575.456
#> delta (gene 1): 0.807282
#> phi (cell 1): 1.03556
#> s (cell 1): 0.763932
#> nu (cell 1): 0.407753
#> theta (batch 1): 0.233915
#> betas:    0.6128  -0.0505   0.5951   1.3916   0.1970   0.3139   0.7890   0.2880  -0.3525  -0.1052  -0.2415  -0.4932
#> 
#> sigma: 0.182621
#> lambda (gene 1): 0.762799
#> epsilon (gene 1): 0.081543
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 16460 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 627.329
#> delta (gene 1): 0.576951
#> phi (cell 1): 0.916332
#> s (cell 1): 0.310997
#> nu (cell 1): 0.427714
#> theta (batch 1): 0.17843
#> betas:    0.9837  -0.0421   0.9221   0.2954   0.9017   0.4305  -0.0790   0.0245  -0.0520  -0.4643  -0.5736  -0.3504
#> 
#> sigma: 0.138402
#> lambda (gene 1): 1.38499
#> epsilon (gene 1): -0.221834
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 16480 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 702.782
#> delta (gene 1): 0.891559
#> phi (cell 1): 0.989379
#> s (cell 1): 0.473382
#> nu (cell 1): 0.411291
#> theta (batch 1): 0.204428
#> betas:    0.5977   0.0060   1.1726   0.6339   0.2744   0.7348  -0.0415   0.3181   0.0454  -0.5341  -0.6064  -0.2599
#> 
#> sigma: 0.120889
#> lambda (gene 1): 1.60378
#> epsilon (gene 1): 0.220104
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 16500 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 471.215
#> delta (gene 1): 0.950727
#> phi (cell 1): 0.945551
#> s (cell 1): 0.371723
#> nu (cell 1): 0.408419
#> theta (batch 1): 0.297702
#> betas:    1.0008  -0.1418   0.5184   0.8506   0.8814   0.3026   0.1514   0.2309   0.1172   0.0799  -0.5638   0.0707
#> 
#> sigma: 0.128397
#> lambda (gene 1): 0.549929
#> epsilon (gene 1): 0.0912961
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 16520 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 671.701
#> delta (gene 1): 0.502086
#> phi (cell 1): 0.918199
#> s (cell 1): 1.56231
#> nu (cell 1): 0.427825
#> theta (batch 1): 0.2961
#> betas:    1.4295  -0.2036   0.5682   0.7487   0.3414   0.2294   0.6450  -0.0379   0.1325  -0.1918  -0.3151   0.2411
#> 
#> sigma: 0.146836
#> lambda (gene 1): 0.392562
#> epsilon (gene 1): -0.503573
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 16540 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 775.112
#> delta (gene 1): 0.540318
#> phi (cell 1): 0.87002
#> s (cell 1): 0.621966
#> nu (cell 1): 0.426395
#> theta (batch 1): 0.196708
#> betas:    0.3182  -0.0822   0.8373   1.1161   0.5057   0.9858   0.2688   0.3443   0.1134   0.1907  -0.5869   0.4239
#> 
#> sigma: 0.192279
#> lambda (gene 1): 0.918897
#> epsilon (gene 1): -0.411043
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 16560 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 622.384
#> delta (gene 1): 0.449841
#> phi (cell 1): 0.895026
#> s (cell 1): 0.832375
#> nu (cell 1): 0.419124
#> theta (batch 1): 0.38166
#> betas:    0.3713   0.0925   1.1828   0.7170   0.3571   0.7757   0.0434   0.3074  -0.2567  -0.3820  -0.8561  -0.7971
#> 
#> sigma: 0.15971
#> lambda (gene 1): 0.556781
#> epsilon (gene 1): -0.422263
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 16580 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 614.318
#> delta (gene 1): 0.684828
#> phi (cell 1): 0.908478
#> s (cell 1): 0.692358
#> nu (cell 1): 0.424082
#> theta (batch 1): 0.0969787
#> betas:    0.9187  -0.0798   0.7934   0.4964   0.5123   0.5146   0.3865   0.0031  -0.2356  -0.1586  -0.5105  -0.0829
#> 
#> sigma: 0.134376
#> lambda (gene 1): 1.21524
#> epsilon (gene 1): -0.0573227
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 16600 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 700.663
#> delta (gene 1): 0.726724
#> phi (cell 1): 0.773186
#> s (cell 1): 0.47966
#> nu (cell 1): 0.418358
#> theta (batch 1): 0.0571528
#> betas:    0.5656   0.0066   0.9942   0.9356   0.7586  -0.0435   0.4600  -0.0861   0.0255  -0.6655  -0.0743  -0.5553
#> 
#> sigma: 0.213214
#> lambda (gene 1): 0.593614
#> epsilon (gene 1): -0.0615317
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 16620 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 763.554
#> delta (gene 1): 0.738919
#> phi (cell 1): 0.730294
#> s (cell 1): 0.339294
#> nu (cell 1): 0.429018
#> theta (batch 1): 0.134471
#> betas:    1.1539  -0.1191   0.6499   0.9035   0.1151   0.4780   0.0740   0.3048   0.0873  -0.6240  -0.0613  -0.4984
#> 
#> sigma: 0.137655
#> lambda (gene 1): 2.40557
#> epsilon (gene 1): 0.024339
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 16640 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 694.039
#> delta (gene 1): 0.486732
#> phi (cell 1): 0.645667
#> s (cell 1): 1.16406
#> nu (cell 1): 0.423002
#> theta (batch 1): 0.329751
#> betas:    0.7729  -0.0757   0.4980   0.6085   0.7539   0.2628   0.7564  -0.1256   0.1595  -0.0565  -0.5876  -0.1707
#> 
#> sigma: 0.138637
#> lambda (gene 1): 0.308092
#> epsilon (gene 1): -0.538666
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 16660 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 585.109
#> delta (gene 1): 0.579917
#> phi (cell 1): 0.674462
#> s (cell 1): 0.929924
#> nu (cell 1): 0.427282
#> theta (batch 1): 0.333446
#> betas:    0.9884  -0.0569   0.5427   0.5836   0.7602   0.2493   0.6125  -0.0711  -0.3519  -0.0400  -0.7429  -0.1764
#> 
#> sigma: 0.136758
#> lambda (gene 1): 1.36907
#> epsilon (gene 1): -0.275272
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 16680 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 726.356
#> delta (gene 1): 0.560145
#> phi (cell 1): 0.713524
#> s (cell 1): 0.733439
#> nu (cell 1): 0.417796
#> theta (batch 1): 0.335912
#> betas:    0.0336   0.0506   1.3354   0.7933   0.8507   0.7759   0.3505   0.3128  -0.1891  -0.3619   0.0637  -0.8865
#> 
#> sigma: 0.145369
#> lambda (gene 1): 1.10784
#> epsilon (gene 1): -0.336944
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 16700 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 966.175
#> delta (gene 1): 0.881255
#> phi (cell 1): 0.698794
#> s (cell 1): 0.310351
#> nu (cell 1): 0.421082
#> theta (batch 1): 0.11671
#> betas:    0.9411  -0.1578   1.0138   0.9132  -0.0656   1.0270   0.6439  -0.3800   0.7907  -0.5417  -0.0883   0.0063
#> 
#> sigma: 0.180495
#> lambda (gene 1): 0.310289
#> epsilon (gene 1): 0.129317
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 16720 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 759.55
#> delta (gene 1): 0.795983
#> phi (cell 1): 0.75715
#> s (cell 1): 0.398843
#> nu (cell 1): 0.427548
#> theta (batch 1): 0.0307113
#> betas:    0.2747  -0.1274   0.7616   1.1124   0.9434   0.5580   0.4807   0.3648   0.6056  -0.6868   0.1842   0.6163
#> 
#> sigma: 0.194154
#> lambda (gene 1): 1.73581
#> epsilon (gene 1): 0.219985
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 16740 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 762.223
#> delta (gene 1): 0.794835
#> phi (cell 1): 0.757444
#> s (cell 1): 0.421506
#> nu (cell 1): 0.429476
#> theta (batch 1): 0.0315063
#> betas:    0.9054  -0.0841   0.8864   0.8345   0.4690   0.7115   0.0937  -0.0336   0.2809  -0.2127  -0.5182  -0.1069
#> 
#> sigma: 0.193027
#> lambda (gene 1): 1.84758
#> epsilon (gene 1): -0.117517
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 16760 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 578.055
#> delta (gene 1): 0.84616
#> phi (cell 1): 0.737303
#> s (cell 1): 0.326206
#> nu (cell 1): 0.41107
#> theta (batch 1): 0.0408439
#> betas:    0.8134  -0.0949   0.4709   0.4828   0.7320   0.7759   0.1605   0.1081   0.0690  -0.0731  -0.2489  -0.3509
#> 
#> sigma: 0.136136
#> lambda (gene 1): 0.995715
#> epsilon (gene 1): -0.0595241
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 16780 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 909.353
#> delta (gene 1): 0.492885
#> phi (cell 1): 0.711567
#> s (cell 1): 1.00556
#> nu (cell 1): 0.42474
#> theta (batch 1): 0.411137
#> betas:    0.5632  -0.0325   0.9500   1.0749   0.2380   0.6827   0.7306  -0.1360  -0.1787  -0.0495  -0.4357  -0.1599
#> 
#> sigma: 0.158873
#> lambda (gene 1): 0.47682
#> epsilon (gene 1): -0.508774
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 16800 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 664.735
#> delta (gene 1): 0.612976
#> phi (cell 1): 0.713325
#> s (cell 1): 0.844981
#> nu (cell 1): 0.418323
#> theta (batch 1): 0.145602
#> betas:    0.6717  -0.0885   0.4765   0.6003   1.1110   0.5422   0.4386   0.2596   0.2075  -0.3192  -0.1971  -0.0192
#> 
#> sigma: 0.156552
#> lambda (gene 1): 1.46053
#> epsilon (gene 1): -0.304948
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 16820 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 634.031
#> delta (gene 1): 0.755813
#> phi (cell 1): 0.741775
#> s (cell 1): 0.36023
#> nu (cell 1): 0.440513
#> theta (batch 1): 0.210132
#> betas:    1.5881  -0.2800   0.4432   0.7282   0.3985   0.1710   0.7502  -0.1131   0.5113  -0.4651  -0.2148   0.4015
#> 
#> sigma: 0.191742
#> lambda (gene 1): 0.708166
#> epsilon (gene 1): 0.170564
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 16840 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 725.454
#> delta (gene 1): 0.729712
#> phi (cell 1): 0.726157
#> s (cell 1): 0.590296
#> nu (cell 1): 0.419985
#> theta (batch 1): 0.378244
#> betas:    1.0363  -0.0957   0.1529   0.7857   0.5965   0.2036   0.6629   0.0496  -0.1966  -0.2307  -0.3364  -0.3274
#> 
#> sigma: 0.179803
#> lambda (gene 1): 1.0084
#> epsilon (gene 1): -0.0394077
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 16860 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 738.233
#> delta (gene 1): 0.612687
#> phi (cell 1): 0.759075
#> s (cell 1): 0.908522
#> nu (cell 1): 0.430603
#> theta (batch 1): 0.174589
#> betas:    0.9408  -0.2060   0.3963   0.7494   0.8700   0.6089   0.4119   0.3151   0.2477   0.0707  -0.1456   0.0230
#> 
#> sigma: 0.163647
#> lambda (gene 1): 1.6593
#> epsilon (gene 1): -0.268959
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 16880 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 663.327
#> delta (gene 1): 0.813941
#> phi (cell 1): 0.728378
#> s (cell 1): 0.476934
#> nu (cell 1): 0.435818
#> theta (batch 1): 0.28807
#> betas:    0.9553  -0.1279   0.8409   0.3196   0.6482   0.5491   0.7197  -0.4244   0.4015  -0.4977  -0.1480  -0.2835
#> 
#> sigma: 0.15474
#> lambda (gene 1): 0.394847
#> epsilon (gene 1): 0.183828
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 16900 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 864.021
#> delta (gene 1): 1.04346
#> phi (cell 1): 0.690353
#> s (cell 1): 0.577925
#> nu (cell 1): 0.414336
#> theta (batch 1): 0.308718
#> betas:    1.3507  -0.2502   0.5193   0.5240   0.9268   0.1403   0.5092   0.3936  -0.0430  -0.0673   0.0301   0.1543
#> 
#> sigma: 0.170993
#> lambda (gene 1): 1.52484
#> epsilon (gene 1): 0.282732
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 16920 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 706.943
#> delta (gene 1): 0.691779
#> phi (cell 1): 0.763777
#> s (cell 1): 0.275736
#> nu (cell 1): 0.426857
#> theta (batch 1): 0.396597
#> betas:    0.4466   0.0414   1.0459   1.1351   0.6585   0.5397   0.3412   0.2622  -0.4827  -0.1014  -0.3863  -0.7999
#> 
#> sigma: 0.137286
#> lambda (gene 1): 1.03506
#> epsilon (gene 1): -0.217497
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 16940 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 688.185
#> delta (gene 1): 0.561592
#> phi (cell 1): 0.839299
#> s (cell 1): 0.564464
#> nu (cell 1): 0.428266
#> theta (batch 1): 0.0871192
#> betas:   -0.0686   0.0062   0.6886   0.9388   0.5979   1.4585   0.0431   0.2025  -0.0063   0.6210  -0.8485  -0.2051
#> 
#> sigma: 0.239362
#> lambda (gene 1): 2.32432
#> epsilon (gene 1): -0.505004
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 16960 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 718.793
#> delta (gene 1): 0.837255
#> phi (cell 1): 0.920246
#> s (cell 1): 0.219163
#> nu (cell 1): 0.413073
#> theta (batch 1): 0.365542
#> betas:    1.1360   0.0402   0.5255   1.0198   0.1834   0.4516  -0.1307   0.1155  -0.6282  -0.5467  -0.8207  -0.5412
#> 
#> sigma: 0.197814
#> lambda (gene 1): 3.32062
#> epsilon (gene 1): 0.133002
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 16980 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 787.272
#> delta (gene 1): 0.573575
#> phi (cell 1): 0.884912
#> s (cell 1): 0.567325
#> nu (cell 1): 0.419762
#> theta (batch 1): 0.0362566
#> betas:    1.1960  -0.1087   1.5947   0.5751   0.2679   0.5942   0.0897   0.2714  -0.0062  -0.5529  -0.0530  -0.5639
#> 
#> sigma: 0.234799
#> lambda (gene 1): 1.99407
#> epsilon (gene 1): -0.3315
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 17000 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 643.594
#> delta (gene 1): 0.705621
#> phi (cell 1): 0.828158
#> s (cell 1): 0.447798
#> nu (cell 1): 0.418774
#> theta (batch 1): 0.014263
#> betas:    1.0414  -0.1617   0.7415   0.2973   0.8943   0.3014   0.8036   0.0794  -0.0888  -0.0167  -0.3199   0.0476
#> 
#> sigma: 0.173716
#> lambda (gene 1): 1.2324
#> epsilon (gene 1): -0.055031
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 17020 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 673.494
#> delta (gene 1): 0.821319
#> phi (cell 1): 0.757315
#> s (cell 1): 0.407061
#> nu (cell 1): 0.420454
#> theta (batch 1): 0.0142368
#> betas:    1.4464  -0.1878   0.4670   1.0113   0.1765   0.5228   0.3255   0.0431   0.1089  -0.1067  -0.2721  -0.1983
#> 
#> sigma: 0.156312
#> lambda (gene 1): 0.564714
#> epsilon (gene 1): -0.114309
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 17040 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 701.545
#> delta (gene 1): 0.659193
#> phi (cell 1): 0.760592
#> s (cell 1): 0.455508
#> nu (cell 1): 0.417088
#> theta (batch 1): 0.010386
#> betas:    0.8565  -0.1272   0.5989   0.3723   1.2803   0.2230   0.5367   0.0206   0.4538  -0.5205  -0.0085  -0.2832
#> 
#> sigma: 0.138597
#> lambda (gene 1): 0.794545
#> epsilon (gene 1): -0.137323
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 17060 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 662.643
#> delta (gene 1): 0.528835
#> phi (cell 1): 0.813399
#> s (cell 1): 0.4947
#> nu (cell 1): 0.410519
#> theta (batch 1): 0.055765
#> betas:   -0.2249   0.0347   0.0251   1.7130   0.6659   0.9062   0.2912   0.2714   0.3025  -0.1531  -0.4197  -0.2777
#> 
#> sigma: 0.155122
#> lambda (gene 1): 1.07292
#> epsilon (gene 1): -0.355508
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 17080 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 616.678
#> delta (gene 1): 0.728631
#> phi (cell 1): 0.76655
#> s (cell 1): 0.581884
#> nu (cell 1): 0.421286
#> theta (batch 1): 0.0822276
#> betas:    0.8661  -0.1003   0.3948   0.6671   0.5146   0.9488   0.2663  -0.1113   0.1086  -0.1110  -0.3390  -0.2675
#> 
#> sigma: 0.114277
#> lambda (gene 1): 1.52128
#> epsilon (gene 1): -0.127089
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 17100 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 661.198
#> delta (gene 1): 0.447528
#> phi (cell 1): 0.806687
#> s (cell 1): 0.72251
#> nu (cell 1): 0.407646
#> theta (batch 1): 0.0690069
#> betas:    0.2422   0.0927   0.6408   1.0451   0.7708   0.7326   0.0270   0.2636  -0.3416   0.0055  -0.9560  -0.7125
#> 
#> sigma: 0.215142
#> lambda (gene 1): 0.8053
#> epsilon (gene 1): -0.568619
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 17120 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 891.734
#> delta (gene 1): 0.968984
#> phi (cell 1): 0.722463
#> s (cell 1): 0.487728
#> nu (cell 1): 0.416785
#> theta (batch 1): 0.0863727
#> betas:    0.7293  -0.0281   0.8102   0.7314   0.6217   0.5690   0.1390   0.3786  -0.0994  -0.5857  -0.3253  -0.2960
#> 
#> sigma: 0.126901
#> lambda (gene 1): 0.0843225
#> epsilon (gene 1): 0.322029
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 17140 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 633.63
#> delta (gene 1): 0.856023
#> phi (cell 1): 0.759325
#> s (cell 1): 0.705898
#> nu (cell 1): 0.426246
#> theta (batch 1): 0.406173
#> betas:    0.5049  -0.0297   1.0673   0.4546   0.5399   0.9799   0.0223   0.0612   0.3383  -0.1563  -0.3638  -0.3728
#> 
#> sigma: 0.16707
#> lambda (gene 1): 0.642003
#> epsilon (gene 1): -0.156646
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 17160 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 806.293
#> delta (gene 1): 0.65279
#> phi (cell 1): 0.898227
#> s (cell 1): 0.488709
#> nu (cell 1): 0.415774
#> theta (batch 1): 0.397717
#> betas:    1.1300  -0.1767   0.9694   0.6763   0.4835   0.9186   0.0351   0.1346   0.3221  -0.0750  -0.5087   0.2339
#> 
#> sigma: 0.171062
#> lambda (gene 1): 0.749227
#> epsilon (gene 1): -0.227457
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 17180 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 798.983
#> delta (gene 1): 0.643559
#> phi (cell 1): 0.876388
#> s (cell 1): 0.383779
#> nu (cell 1): 0.416439
#> theta (batch 1): 0.153505
#> betas:    0.6505   0.0215   0.7365   1.0139   0.2897   0.6223  -0.0276   0.1566   0.0725  -0.5556  -0.4420  -0.4439
#> 
#> sigma: 0.123508
#> lambda (gene 1): 0.597848
#> epsilon (gene 1): -0.29602
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 17200 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 874.302
#> delta (gene 1): 0.840647
#> phi (cell 1): 0.973244
#> s (cell 1): 0.731902
#> nu (cell 1): 0.419177
#> theta (batch 1): 0.217144
#> betas:    0.0950   0.0070   0.6660   0.8932   0.9265   0.5292   0.5698   0.3753  -0.2210   0.0329  -0.1366  -0.6411
#> 
#> sigma: 0.140665
#> lambda (gene 1): 1.10163
#> epsilon (gene 1): -0.0134478
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 17220 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 678.072
#> delta (gene 1): 0.525047
#> phi (cell 1): 1.01238
#> s (cell 1): 1.23288
#> nu (cell 1): 0.428184
#> theta (batch 1): 0.334116
#> betas:    0.7396  -0.0940   0.3894   0.5098   0.9622   0.5650   0.2890   0.4862  -0.0963  -0.0885  -0.5521   0.3643
#> 
#> sigma: 0.153115
#> lambda (gene 1): 1.09439
#> epsilon (gene 1): -0.407647
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 17240 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 621.75
#> delta (gene 1): 1.01906
#> phi (cell 1): 0.907554
#> s (cell 1): 0.628107
#> nu (cell 1): 0.412447
#> theta (batch 1): 0.212805
#> betas:    1.2759  -0.1385   0.6744   0.5681   0.6726   0.4136   0.2168   0.0104   0.0518  -0.0198  -0.7643   0.2780
#> 
#> sigma: 0.196941
#> lambda (gene 1): 0.523403
#> epsilon (gene 1): 0.141517
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 17260 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 827.435
#> delta (gene 1): 0.789551
#> phi (cell 1): 0.757579
#> s (cell 1): 0.365405
#> nu (cell 1): 0.443936
#> theta (batch 1): 0.362069
#> betas:    0.6825  -0.0657   0.8749   0.7243   0.6227   0.7216   0.3265   0.0753   0.4585  -0.5630  -0.4267   0.0025
#> 
#> sigma: 0.12738
#> lambda (gene 1): 0.530764
#> epsilon (gene 1): 0.0771575
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 17280 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 589.605
#> delta (gene 1): 0.730935
#> phi (cell 1): 0.711627
#> s (cell 1): 1.30304
#> nu (cell 1): 0.410396
#> theta (batch 1): 0.421201
#> betas:    0.8482  -0.0539   0.4892   0.4743   0.9806   0.9026  -0.5482   0.5918   0.2370  -0.6934  -0.5510  -0.0107
#> 
#> sigma: 0.169752
#> lambda (gene 1): 0.855426
#> epsilon (gene 1): 0.0483365
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 17300 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 783.608
#> delta (gene 1): 0.526683
#> phi (cell 1): 0.607873
#> s (cell 1): 0.472817
#> nu (cell 1): 0.430773
#> theta (batch 1): 0.23895
#> betas:    0.9456  -0.0828   0.8588   0.6038   0.4791   0.6862   0.3052  -0.2164   0.0280  -0.0758  -0.4856  -0.4492
#> 
#> sigma: 0.134717
#> lambda (gene 1): 1.01049
#> epsilon (gene 1): -0.443668
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 17320 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 771.942
#> delta (gene 1): 0.564211
#> phi (cell 1): 0.643452
#> s (cell 1): 0.558008
#> nu (cell 1): 0.423666
#> theta (batch 1): 0.283744
#> betas:    1.1780  -0.0488   0.1904   1.0854   0.2897   0.8517  -0.1526  -0.2416   0.1206  -0.4235  -0.8174  -0.4033
#> 
#> sigma: 0.268006
#> lambda (gene 1): 0.409269
#> epsilon (gene 1): -0.287462
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 17340 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 691.967
#> delta (gene 1): 0.801164
#> phi (cell 1): 0.657872
#> s (cell 1): 0.69494
#> nu (cell 1): 0.428743
#> theta (batch 1): 0.0874131
#> betas:    0.8963  -0.1067   0.3873   0.5595   0.5731   0.9550   0.1649   0.1314   0.0819  -0.3596  -0.2261  -0.2542
#> 
#> sigma: 0.167226
#> lambda (gene 1): 1.86959
#> epsilon (gene 1): 0.107106
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 17360 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 733.456
#> delta (gene 1): 0.759012
#> phi (cell 1): 0.68366
#> s (cell 1): 0.587752
#> nu (cell 1): 0.410696
#> theta (batch 1): 0.181573
#> betas:    0.8404   0.0271   0.4605   1.0153   0.2375   0.5858   0.1819  -0.0171  -0.5237  -0.0558  -0.7905  -0.9733
#> 
#> sigma: 0.146766
#> lambda (gene 1): 0.819977
#> epsilon (gene 1): -0.0189704
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 17380 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 923.678
#> delta (gene 1): 0.604111
#> phi (cell 1): 0.673244
#> s (cell 1): 0.273217
#> nu (cell 1): 0.403423
#> theta (batch 1): 0.247591
#> betas:    0.5565  -0.1576   0.6851   1.2636   0.0923   0.9433   0.9755   0.1235  -0.1413   0.3694   0.1689  -0.1637
#> 
#> sigma: 0.184898
#> lambda (gene 1): 0.315448
#> epsilon (gene 1): -0.431257
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 17400 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 643.7
#> delta (gene 1): 0.523337
#> phi (cell 1): 0.754965
#> s (cell 1): 0.256221
#> nu (cell 1): 0.414566
#> theta (batch 1): 0.170002
#> betas:    0.0762   0.0973   1.4261   0.4411   0.8152   1.0125  -0.3885   0.5595  -0.2794  -0.1134  -0.7077  -0.6090
#> 
#> sigma: 0.165041
#> lambda (gene 1): 0.72457
#> epsilon (gene 1): -0.467305
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 17420 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 594.359
#> delta (gene 1): 0.555043
#> phi (cell 1): 0.81018
#> s (cell 1): 2.32185
#> nu (cell 1): 0.420642
#> theta (batch 1): 0.252005
#> betas:    1.2197  -0.1844  -0.0075   1.4958   0.1190   0.3262   0.5757   0.2987  -0.2915   0.2872  -0.6970   0.5508
#> 
#> sigma: 0.201017
#> lambda (gene 1): 1.09715
#> epsilon (gene 1): -0.390853
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 17440 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 794.249
#> delta (gene 1): 0.449752
#> phi (cell 1): 0.730792
#> s (cell 1): 1.32878
#> nu (cell 1): 0.432598
#> theta (batch 1): 0.265331
#> betas:    0.6162  -0.0928  -0.0989   1.3572   0.3240   1.1513   0.0654  -0.0393   0.4729  -0.4058   0.0235  -0.2883
#> 
#> sigma: 0.155829
#> lambda (gene 1): 1.16086
#> epsilon (gene 1): -0.631892
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 17460 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 566.541
#> delta (gene 1): 0.70937
#> phi (cell 1): 0.760939
#> s (cell 1): 0.510741
#> nu (cell 1): 0.415549
#> theta (batch 1): 0.0950893
#> betas:    0.7464  -0.1743   0.7852   0.4676   0.9209   1.0558   0.0815   0.4526   0.1170   0.2398  -0.1772  -0.0811
#> 
#> sigma: 0.188339
#> lambda (gene 1): 0.86067
#> epsilon (gene 1): -0.187092
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 17480 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 719.604
#> delta (gene 1): 0.939273
#> phi (cell 1): 0.777064
#> s (cell 1): 0.451265
#> nu (cell 1): 0.418502
#> theta (batch 1): 0.0925969
#> betas:    1.2452  -0.1268   0.3898   0.7336   0.7631   0.1927   0.1750   0.4456  -0.4419  -0.0424  -0.5599  -0.1167
#> 
#> sigma: 0.151072
#> lambda (gene 1): 2.84596
#> epsilon (gene 1): 0.225422
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 17500 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 617.861
#> delta (gene 1): 0.560637
#> phi (cell 1): 0.856258
#> s (cell 1): 1.0136
#> nu (cell 1): 0.429469
#> theta (batch 1): 0.281915
#> betas:    1.3439  -0.2254  -0.2148   1.0933   0.3333   0.9057  -0.2299   0.5656   0.1869  -0.0220  -0.3423   0.1040
#> 
#> sigma: 0.190864
#> lambda (gene 1): 0.909485
#> epsilon (gene 1): -0.40579
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 17520 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 949.94
#> delta (gene 1): 0.708387
#> phi (cell 1): 0.730864
#> s (cell 1): 0.444143
#> nu (cell 1): 0.433693
#> theta (batch 1): 0.0101699
#> betas:    0.0524   0.1061   0.5615   1.3340   0.6237   0.6630   0.0655   0.4552  -0.3570  -0.0874  -0.5898  -0.8444
#> 
#> sigma: 0.133326
#> lambda (gene 1): 0.634894
#> epsilon (gene 1): -0.189002
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 17540 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 580.322
#> delta (gene 1): 0.897272
#> phi (cell 1): 0.674899
#> s (cell 1): 0.418553
#> nu (cell 1): 0.440232
#> theta (batch 1): 0.020737
#> betas:    0.4061  -0.0238   0.6910   1.1645   0.5345   0.5209   0.3064   0.6868  -0.5076   0.1476  -0.5451  -0.2015
#> 
#> sigma: 0.191942
#> lambda (gene 1): 0.568856
#> epsilon (gene 1): 0.143665
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 17560 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 685.259
#> delta (gene 1): 0.555022
#> phi (cell 1): 0.691652
#> s (cell 1): 0.556748
#> nu (cell 1): 0.429924
#> theta (batch 1): 0.117061
#> betas:    0.6291  -0.0737   0.9893   1.0073   0.6401   0.1582   0.8690   0.2310  -0.3164   0.2738  -0.8245   0.1361
#> 
#> sigma: 0.181997
#> lambda (gene 1): 1.83528
#> epsilon (gene 1): -0.284838
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 17580 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 713.712
#> delta (gene 1): 0.63419
#> phi (cell 1): 0.811655
#> s (cell 1): 0.329592
#> nu (cell 1): 0.408024
#> theta (batch 1): 0.156563
#> betas:    1.0006  -0.1981   1.0611   0.3062   1.3275   0.0666   0.7037   0.0147   0.2434  -0.0792  -0.0107  -0.0723
#> 
#> sigma: 0.175664
#> lambda (gene 1): 1.50115
#> epsilon (gene 1): -0.215416
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 17600 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 695.142
#> delta (gene 1): 0.607365
#> phi (cell 1): 0.754863
#> s (cell 1): 0.535058
#> nu (cell 1): 0.412754
#> theta (batch 1): 0.270884
#> betas:    0.5192   0.0089   0.3419   0.8368   0.6922   0.9225  -0.2606   0.3758  -0.1422  -0.2832  -0.4500  -0.3318
#> 
#> sigma: 0.145407
#> lambda (gene 1): 0.580127
#> epsilon (gene 1): -0.335832
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 17620 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 755.658
#> delta (gene 1): 1.00532
#> phi (cell 1): 0.767671
#> s (cell 1): 0.190094
#> nu (cell 1): 0.423165
#> theta (batch 1): 0.251471
#> betas:    0.7038  -0.0744   0.4617   1.1135   0.6181   0.3704   0.5783   0.1240   0.0564  -0.0591  -0.7294   0.3418
#> 
#> sigma: 0.156575
#> lambda (gene 1): 1.42082
#> epsilon (gene 1): 0.228231
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 17640 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 691.31
#> delta (gene 1): 0.474723
#> phi (cell 1): 0.726911
#> s (cell 1): 0.516872
#> nu (cell 1): 0.414683
#> theta (batch 1): 0.0953563
#> betas:    1.1757  -0.1909   0.3919   1.2095   0.3736   0.3362   0.5264   0.3696   0.0730  -0.2908   0.0661  -0.1831
#> 
#> sigma: 0.149825
#> lambda (gene 1): 2.30873
#> epsilon (gene 1): -0.502333
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 17660 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 820.746
#> delta (gene 1): 0.521536
#> phi (cell 1): 0.718551
#> s (cell 1): 1.19245
#> nu (cell 1): 0.42566
#> theta (batch 1): 0.253539
#> betas:    0.5924  -0.0863   0.9594   1.0277   0.7365   0.3395   0.3403   0.2274   0.4261  -0.7692   0.4281  -0.6752
#> 
#> sigma: 0.182076
#> lambda (gene 1): 0.569053
#> epsilon (gene 1): -0.370362
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 17680 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 704.469
#> delta (gene 1): 0.733457
#> phi (cell 1): 0.705878
#> s (cell 1): 0.563754
#> nu (cell 1): 0.416117
#> theta (batch 1): 0.212441
#> betas:    1.2625  -0.2925   0.4065   1.0487   0.3415   0.6925   0.6141   0.2187   0.2841  -0.0983   0.2648   0.4072
#> 
#> sigma: 0.16338
#> lambda (gene 1): 0.493159
#> epsilon (gene 1): -0.103033
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 17700 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 734.513
#> delta (gene 1): 0.698212
#> phi (cell 1): 0.770951
#> s (cell 1): 0.307379
#> nu (cell 1): 0.417696
#> theta (batch 1): 0.143743
#> betas:    0.6832  -0.1023   0.1673   1.1347   0.8769   0.6830  -0.2312   0.6131  -0.0297  -0.1808  -0.1937  -0.1843
#> 
#> sigma: 0.175485
#> lambda (gene 1): 1.58419
#> epsilon (gene 1): -0.0847052
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 17720 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 626.611
#> delta (gene 1): 0.612823
#> phi (cell 1): 0.942235
#> s (cell 1): 0.635662
#> nu (cell 1): 0.424936
#> theta (batch 1): 0.135899
#> betas:    1.1190  -0.0547   0.5212   0.6340   0.7735   0.5463  -0.0642  -0.0544   0.1700  -0.2329  -0.8837  -0.2969
#> 
#> sigma: 0.13582
#> lambda (gene 1): 1.36728
#> epsilon (gene 1): -0.350391
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 17740 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 607.823
#> delta (gene 1): 0.731895
#> phi (cell 1): 0.924664
#> s (cell 1): 0.320254
#> nu (cell 1): 0.439281
#> theta (batch 1): 0.103976
#> betas:    0.2197   0.0134   1.1842   0.6810   0.9067   0.5503   0.3904   0.2267   0.2231  -0.2571  -0.5600  -0.3614
#> 
#> sigma: 0.156168
#> lambda (gene 1): 0.691123
#> epsilon (gene 1): -0.0400565
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 17760 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 794.095
#> delta (gene 1): 0.881047
#> phi (cell 1): 0.911547
#> s (cell 1): 0.410142
#> nu (cell 1): 0.419073
#> theta (batch 1): 0.224048
#> betas:    0.5331  -0.2300   1.1877   0.7757   0.8557   0.6423   0.7467   0.1344   0.6934   0.1672   0.0367   0.6652
#> 
#> sigma: 0.186015
#> lambda (gene 1): 2.0834
#> epsilon (gene 1): -0.0235135
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 17780 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 790.847
#> delta (gene 1): 0.962419
#> phi (cell 1): 0.848554
#> s (cell 1): 0.762009
#> nu (cell 1): 0.402733
#> theta (batch 1): 0.223735
#> betas:    0.9784  -0.0202   1.0745   0.4946   0.6216   0.3016   0.2837   0.1747  -0.1959  -0.1593  -0.8750  -0.2647
#> 
#> sigma: 0.186821
#> lambda (gene 1): 0.610389
#> epsilon (gene 1): 0.100567
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 17800 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 690.533
#> delta (gene 1): 1.10795
#> phi (cell 1): 0.788126
#> s (cell 1): 0.345832
#> nu (cell 1): 0.407493
#> theta (batch 1): 0.196031
#> betas:    0.3964   0.0097   0.8379   1.3647   0.1172   1.0538  -0.1243   0.1889  -0.1415   0.1587  -0.6803  -0.2458
#> 
#> sigma: 0.18504
#> lambda (gene 1): 1.50013
#> epsilon (gene 1): 0.127741
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 17820 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 652.694
#> delta (gene 1): 0.596
#> phi (cell 1): 0.685867
#> s (cell 1): 0.422494
#> nu (cell 1): 0.409279
#> theta (batch 1): 0.11794
#> betas:    1.1569  -0.1509   0.5986   0.3837   0.3620   0.9365  -0.0422   0.3362   0.1397  -0.2102  -0.3363  -0.2037
#> 
#> sigma: 0.161101
#> lambda (gene 1): 0.566959
#> epsilon (gene 1): -0.307833
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 17840 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 741.011
#> delta (gene 1): 0.668572
#> phi (cell 1): 0.758792
#> s (cell 1): 0.153314
#> nu (cell 1): 0.422309
#> theta (batch 1): 0.257696
#> betas:    0.8768  -0.0681   0.4163   0.9602   0.4235   0.4771   0.3627   0.0182   0.2921  -0.7257  -0.2193  -0.0357
#> 
#> sigma: 0.128529
#> lambda (gene 1): 0.988408
#> epsilon (gene 1): -0.133758
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 17860 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 540.432
#> delta (gene 1): 0.637261
#> phi (cell 1): 0.74602
#> s (cell 1): 0.633118
#> nu (cell 1): 0.430269
#> theta (batch 1): 0.373947
#> betas:    1.2447  -0.0637   1.0712   0.3382   0.8530  -0.0212   0.2249  -0.1496   0.0585  -0.4960  -0.6065  -0.2532
#> 
#> sigma: 0.186202
#> lambda (gene 1): 0.451533
#> epsilon (gene 1): -0.255186
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 17880 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 708.159
#> delta (gene 1): 0.48503
#> phi (cell 1): 0.660886
#> s (cell 1): 0.512582
#> nu (cell 1): 0.438215
#> theta (batch 1): 0.228475
#> betas:    0.4909  -0.0658   0.2020   0.8586   0.4067   0.8952   0.4475   0.1972   0.0981  -0.2207  -0.3859   0.1382
#> 
#> sigma: 0.118568
#> lambda (gene 1): 0.643083
#> epsilon (gene 1): -0.42644
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 17900 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 797.448
#> delta (gene 1): 0.766872
#> phi (cell 1): 0.743489
#> s (cell 1): 0.309273
#> nu (cell 1): 0.421418
#> theta (batch 1): 0.301444
#> betas:    0.5672  -0.0351   1.3156   0.8467   0.8573   0.1002   0.4201   0.1843   0.1822  -0.4402  -0.3470  -0.0828
#> 
#> sigma: 0.137536
#> lambda (gene 1): 0.996251
#> epsilon (gene 1): -0.0440467
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 17920 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 705.019
#> delta (gene 1): 0.606867
#> phi (cell 1): 0.898602
#> s (cell 1): 0.271997
#> nu (cell 1): 0.420804
#> theta (batch 1): 0.272818
#> betas:    0.3193   0.0102   0.1282   0.8607   1.2941   0.2786   0.3718  -0.0689   0.1743  -0.0521  -0.6506  -0.2379
#> 
#> sigma: 0.151214
#> lambda (gene 1): 0.772662
#> epsilon (gene 1): -0.381456
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 17940 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 712.351
#> delta (gene 1): 1.13404
#> phi (cell 1): 0.990439
#> s (cell 1): 0.321202
#> nu (cell 1): 0.418804
#> theta (batch 1): 0.256146
#> betas:    0.4263   0.0011   0.8286   0.7369   0.8057   0.6464   0.1830  -0.0951   0.0761  -0.1158  -0.8038  -0.2539
#> 
#> sigma: 0.149791
#> lambda (gene 1): 1.36762
#> epsilon (gene 1): 0.457421
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 17960 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 640.537
#> delta (gene 1): 0.860658
#> phi (cell 1): 1.00996
#> s (cell 1): 0.552329
#> nu (cell 1): 0.412906
#> theta (batch 1): 0.0943342
#> betas:    0.3316   0.0795   0.1128   1.0286   0.5577   0.7393  -0.0406   0.1059  -0.0837  -0.3426  -0.8784  -0.3493
#> 
#> sigma: 0.117021
#> lambda (gene 1): 0.66056
#> epsilon (gene 1): 0.133596
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 17980 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 622.032
#> delta (gene 1): 0.819528
#> phi (cell 1): 1.04794
#> s (cell 1): 0.283247
#> nu (cell 1): 0.420004
#> theta (batch 1): 0.259229
#> betas:    0.5847  -0.0047   0.6047   1.0592   0.4687   0.7821   0.1342   0.0692  -0.0481  -0.2623  -0.8075  -0.0326
#> 
#> sigma: 0.182967
#> lambda (gene 1): 1.36739
#> epsilon (gene 1): 0.143449
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 18000 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 705.571
#> delta (gene 1): 0.573652
#> phi (cell 1): 0.951649
#> s (cell 1): 0.565921
#> nu (cell 1): 0.411024
#> theta (batch 1): 0.156763
#> betas:    0.7164  -0.1054   0.5213   1.0316   0.7777   0.2109   0.3822   0.5583   0.0113  -0.4505   0.1948  -0.1905
#> 
#> sigma: 0.15802
#> lambda (gene 1): 0.460005
#> epsilon (gene 1): -0.354585
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 18020 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 663.255
#> delta (gene 1): 0.756543
#> phi (cell 1): 1.0078
#> s (cell 1): 0.158774
#> nu (cell 1): 0.414114
#> theta (batch 1): 0.333918
#> betas:    0.9029  -0.1335   0.2656   0.9355   0.2908   0.5495   1.0422  -0.2642   0.2873  -0.3455   0.0112  -0.2198
#> 
#> sigma: 0.176055
#> lambda (gene 1): 1.91395
#> epsilon (gene 1): -0.0619639
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 18040 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 562.639
#> delta (gene 1): 0.65185
#> phi (cell 1): 0.863333
#> s (cell 1): 0.567802
#> nu (cell 1): 0.415937
#> theta (batch 1): 0.677691
#> betas:    0.6277  -0.0547   0.6544   1.1678   0.6589   0.3610   0.5634  -0.0441  -0.0038   0.1155  -0.3112  -0.6893
#> 
#> sigma: 0.163262
#> lambda (gene 1): 0.623956
#> epsilon (gene 1): -0.376962
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 18060 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 666.252
#> delta (gene 1): 0.53684
#> phi (cell 1): 0.889165
#> s (cell 1): 0.394237
#> nu (cell 1): 0.415985
#> theta (batch 1): 0.429984
#> betas:    0.4698   0.0346   0.5745   1.2101   0.0421   0.8766   0.0022   0.4727  -0.4712  -0.1471  -0.7094  -0.4894
#> 
#> sigma: 0.158576
#> lambda (gene 1): 0.741809
#> epsilon (gene 1): -0.288701
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 18080 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 585.217
#> delta (gene 1): 0.609334
#> phi (cell 1): 0.822177
#> s (cell 1): 0.732137
#> nu (cell 1): 0.417305
#> theta (batch 1): 0.0591331
#> betas:    0.6262  -0.1017   1.0468   0.8957   0.5990   0.7112   0.2302   0.5322   0.0137  -0.3353  -0.0269   0.0310
#> 
#> sigma: 0.161806
#> lambda (gene 1): 0.63221
#> epsilon (gene 1): -0.230684
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 18100 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 615.702
#> delta (gene 1): 0.601768
#> phi (cell 1): 0.751887
#> s (cell 1): 0.462811
#> nu (cell 1): 0.425115
#> theta (batch 1): 0.128004
#> betas:    1.2691  -0.1099   1.0516   0.7881  -0.2838   0.7339   0.4609  -0.3597   0.2178  -0.3753  -0.8546   0.0090
#> 
#> sigma: 0.137748
#> lambda (gene 1): 0.738635
#> epsilon (gene 1): -0.106423
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 18120 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 648.809
#> delta (gene 1): 0.814426
#> phi (cell 1): 0.768157
#> s (cell 1): 0.771479
#> nu (cell 1): 0.419712
#> theta (batch 1): 0.242849
#> betas:    0.7851  -0.0558  -0.0625   1.0062   0.8491   0.2329   0.1198   0.4140  -0.1628  -0.5640   0.2278  -0.5867
#> 
#> sigma: 0.150911
#> lambda (gene 1): 1.76023
#> epsilon (gene 1): -0.0471134
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 18140 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 767.213
#> delta (gene 1): 0.789473
#> phi (cell 1): 0.907756
#> s (cell 1): 0.306317
#> nu (cell 1): 0.423288
#> theta (batch 1): 0.532068
#> betas:    0.7254  -0.0117   0.5282   0.7406   0.7315   0.6215   0.1171   0.1069  -0.0343  -0.4797  -0.5733  -0.1797
#> 
#> sigma: 0.165528
#> lambda (gene 1): 0.589735
#> epsilon (gene 1): 0.0767064
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 18160 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 803.637
#> delta (gene 1): 0.794737
#> phi (cell 1): 0.783685
#> s (cell 1): 0.35857
#> nu (cell 1): 0.425175
#> theta (batch 1): 0.308104
#> betas:    0.7722  -0.1500   0.2421   1.4651   0.2604   0.7838   0.3844   0.2384   0.1291  -0.1288   0.1869  -0.1890
#> 
#> sigma: 0.186534
#> lambda (gene 1): 0.939051
#> epsilon (gene 1): -0.112411
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 18180 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 701.914
#> delta (gene 1): 1.43285
#> phi (cell 1): 0.84257
#> s (cell 1): 0.594209
#> nu (cell 1): 0.427453
#> theta (batch 1): 0.319005
#> betas:    0.8061   0.0252   0.5435   0.6358   0.7547   0.5568   0.0766  -0.0087   0.0198  -0.6405  -0.4277  -0.5640
#> 
#> sigma: 0.162964
#> lambda (gene 1): 0.676209
#> epsilon (gene 1): 0.49852
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 18200 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 754.101
#> delta (gene 1): 0.83976
#> phi (cell 1): 0.906753
#> s (cell 1): 0.570567
#> nu (cell 1): 0.408499
#> theta (batch 1): 0.118781
#> betas:    1.0540  -0.0430   1.0472   0.3239   0.3530   0.6052   0.3449  -0.3193  -0.0688  -0.2446  -0.3941  -0.7476
#> 
#> sigma: 0.139295
#> lambda (gene 1): 1.72566
#> epsilon (gene 1): -0.0819375
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 18220 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 862.952
#> delta (gene 1): 0.611745
#> phi (cell 1): 0.921412
#> s (cell 1): 0.438306
#> nu (cell 1): 0.412733
#> theta (batch 1): 0.060867
#> betas:    1.0054  -0.1805   0.5316   0.5841   1.0654   0.5426   0.5276   0.2022   0.0503   0.0037  -0.0739  -0.0699
#> 
#> sigma: 0.164033
#> lambda (gene 1): 0.555205
#> epsilon (gene 1): -0.317723
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 18240 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 832.366
#> delta (gene 1): 0.814407
#> phi (cell 1): 0.907567
#> s (cell 1): 0.53952
#> nu (cell 1): 0.418401
#> theta (batch 1): 0.123456
#> betas:    0.3805   0.0222   0.9046   0.4598   0.9030   0.6897   0.0118   0.3725  -0.1157  -0.0931  -0.9281   0.2251
#> 
#> sigma: 0.186681
#> lambda (gene 1): 0.827063
#> epsilon (gene 1): -0.00468452
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 18260 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 699.477
#> delta (gene 1): 0.709907
#> phi (cell 1): 0.765304
#> s (cell 1): 0.484943
#> nu (cell 1): 0.403185
#> theta (batch 1): 0.121351
#> betas:    0.2025   0.0545   1.1907   0.6981   0.7152   0.4008   0.5512  -0.1788   0.3538  -0.4908  -0.5307  -0.2814
#> 
#> sigma: 0.239293
#> lambda (gene 1): 1.46071
#> epsilon (gene 1): -0.144501
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 18280 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 766.982
#> delta (gene 1): 0.672915
#> phi (cell 1): 0.716861
#> s (cell 1): 0.393911
#> nu (cell 1): 0.420164
#> theta (batch 1): 0.045838
#> betas:    1.0535  -0.1070   0.9153   0.5990   0.6130   0.3647   0.4549   0.1269  -0.0060  -0.1768  -0.0773  -0.9212
#> 
#> sigma: 0.13503
#> lambda (gene 1): 2.53746
#> epsilon (gene 1): -0.273235
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 18300 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 520.624
#> delta (gene 1): 0.700619
#> phi (cell 1): 0.726308
#> s (cell 1): 0.351626
#> nu (cell 1): 0.427193
#> theta (batch 1): 0.0896628
#> betas:    1.3363  -0.1505   0.3550   0.6136   0.4434   0.6832  -0.3204   0.7210  -0.2150  -0.3034  -0.1687  -0.4311
#> 
#> sigma: 0.113844
#> lambda (gene 1): 1.3392
#> epsilon (gene 1): -0.137803
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 18320 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 743.045
#> delta (gene 1): 0.493686
#> phi (cell 1): 0.648931
#> s (cell 1): 0.606096
#> nu (cell 1): 0.422156
#> theta (batch 1): 0.651794
#> betas:    0.8571  -0.0711   0.7385   0.8759   0.0519   1.1751  -0.1038  -0.1244   0.2786  -0.0884  -0.7769  -0.1217
#> 
#> sigma: 0.134158
#> lambda (gene 1): 1.02373
#> epsilon (gene 1): -0.528021
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 18340 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 650.408
#> delta (gene 1): 0.542473
#> phi (cell 1): 0.663462
#> s (cell 1): 0.361454
#> nu (cell 1): 0.415959
#> theta (batch 1): 0.790149
#> betas:    0.2618  -0.0911   0.3722   1.3679   1.0175   0.1025   0.9899   0.1842   0.5032  -0.4572   0.4801  -0.3101
#> 
#> sigma: 0.172738
#> lambda (gene 1): 0.616107
#> epsilon (gene 1): -0.487328
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 18360 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 805.59
#> delta (gene 1): 0.794491
#> phi (cell 1): 0.595425
#> s (cell 1): 0.204464
#> nu (cell 1): 0.420512
#> theta (batch 1): 0.3669
#> betas:    1.0497  -0.0936   0.3795   0.6975   0.4028   0.4995   0.5388  -0.2451   0.1012  -0.3381  -0.6784   0.1597
#> 
#> sigma: 0.165758
#> lambda (gene 1): 2.48712
#> epsilon (gene 1): 0.116376
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 18380 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 690.294
#> delta (gene 1): 0.944759
#> phi (cell 1): 0.6589
#> s (cell 1): 0.676792
#> nu (cell 1): 0.415834
#> theta (batch 1): 0.349994
#> betas:    0.5875  -0.0896   0.4300   0.7357   0.8934   0.5253   0.2123   0.1198   0.3861  -0.2764  -0.1923  -0.0310
#> 
#> sigma: 0.0994366
#> lambda (gene 1): 0.937957
#> epsilon (gene 1): 0.0983468
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 18400 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 800.436
#> delta (gene 1): 0.460387
#> phi (cell 1): 0.721012
#> s (cell 1): 0.481539
#> nu (cell 1): 0.432818
#> theta (batch 1): 0.192173
#> betas:    0.7628   0.0154   0.7201   0.6516   0.2881   0.6436   0.3146  -0.3561  -0.1683  -0.3016  -0.6888  -0.3964
#> 
#> sigma: 0.22342
#> lambda (gene 1): 1.2387
#> epsilon (gene 1): -0.528371
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 18420 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 668.054
#> delta (gene 1): 0.861791
#> phi (cell 1): 0.856606
#> s (cell 1): 0.295293
#> nu (cell 1): 0.446113
#> theta (batch 1): 0.162491
#> betas:    0.2585   0.0202   0.9159   1.1612   0.4752   0.9552  -0.1269   0.3601   0.0840  -0.1111  -0.6265  -0.1834
#> 
#> sigma: 0.146253
#> lambda (gene 1): 1.79816
#> epsilon (gene 1): -0.0289238
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 18440 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 701.03
#> delta (gene 1): 0.546107
#> phi (cell 1): 0.89453
#> s (cell 1): 0.461921
#> nu (cell 1): 0.421711
#> theta (batch 1): 0.248041
#> betas:    0.7327   0.0076   0.4743   0.5720   0.7104   0.8411  -0.0623  -0.0009   0.0285  -0.3915  -0.7019  -0.5368
#> 
#> sigma: 0.218536
#> lambda (gene 1): 0.574423
#> epsilon (gene 1): -0.325291
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 18460 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 605.917
#> delta (gene 1): 0.659698
#> phi (cell 1): 0.952779
#> s (cell 1): 0.417853
#> nu (cell 1): 0.419417
#> theta (batch 1): 0.0452632
#> betas:    0.7454  -0.0616   0.2523   1.1284   0.7075   0.4611   0.2916   0.1131   0.1178  -0.4788  -0.1007  -0.5265
#> 
#> sigma: 0.179051
#> lambda (gene 1): 0.526523
#> epsilon (gene 1): -0.156585
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 18480 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 751.836
#> delta (gene 1): 0.658056
#> phi (cell 1): 0.912268
#> s (cell 1): 0.779427
#> nu (cell 1): 0.43532
#> theta (batch 1): 0.0518544
#> betas:    0.1100   0.0575   0.8202   1.0275   0.9717   0.3662   0.3506   0.3074  -0.3025   0.2643  -0.7614  -0.5705
#> 
#> sigma: 0.167281
#> lambda (gene 1): 0.555211
#> epsilon (gene 1): -0.308636
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 18500 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 617.55
#> delta (gene 1): 0.798606
#> phi (cell 1): 0.772254
#> s (cell 1): 0.417955
#> nu (cell 1): 0.428225
#> theta (batch 1): 0.119685
#> betas:    1.2302  -0.1146   1.2410   0.5183  -0.2524   1.1016  -0.1050  -0.0235   0.3523  -0.3388  -0.4532  -0.4039
#> 
#> sigma: 0.183694
#> lambda (gene 1): 0.926375
#> epsilon (gene 1): -0.115
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 18520 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 638.342
#> delta (gene 1): 0.542656
#> phi (cell 1): 0.85102
#> s (cell 1): 0.488852
#> nu (cell 1): 0.408056
#> theta (batch 1): 0.174567
#> betas:    0.3643  -0.0844   0.5645   0.6456   1.1666   0.3093   0.6225   0.4334  -0.5025   0.8128  -0.6276  -0.0450
#> 
#> sigma: 0.170184
#> lambda (gene 1): 0.424617
#> epsilon (gene 1): -0.519191
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 18540 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 807.848
#> delta (gene 1): 0.730529
#> phi (cell 1): 0.77129
#> s (cell 1): 0.502882
#> nu (cell 1): 0.417021
#> theta (batch 1): 0.0113039
#> betas:    0.7984  -0.1058   0.0383   0.7754   1.0679   0.5254   0.2750   0.3934  -0.2221  -0.0268  -0.1975  -0.2233
#> 
#> sigma: 0.124474
#> lambda (gene 1): 2.03263
#> epsilon (gene 1): -0.115709
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 18560 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 584.137
#> delta (gene 1): 0.648045
#> phi (cell 1): 0.735078
#> s (cell 1): 0.545499
#> nu (cell 1): 0.427705
#> theta (batch 1): 0.0348765
#> betas:    0.6679  -0.0620   0.9496   0.5583   0.3567   0.9294   0.5734  -0.4897   0.5535  -0.4455  -0.3636  -0.3866
#> 
#> sigma: 0.207139
#> lambda (gene 1): 0.717437
#> epsilon (gene 1): -0.133771
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 18580 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 744.34
#> delta (gene 1): 0.803294
#> phi (cell 1): 0.689415
#> s (cell 1): 0.308132
#> nu (cell 1): 0.429721
#> theta (batch 1): 0.0462117
#> betas:    1.0947  -0.2438   0.1254   1.1949   0.2028   0.7361   0.3701   0.5150  -0.0258  -0.1347   0.5428  -0.3403
#> 
#> sigma: 0.170655
#> lambda (gene 1): 2.9401
#> epsilon (gene 1): 0.0209327
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 18600 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 657.994
#> delta (gene 1): 0.541073
#> phi (cell 1): 0.709293
#> s (cell 1): 0.433042
#> nu (cell 1): 0.43609
#> theta (batch 1): 0.0148199
#> betas:    0.6765  -0.0370   0.3915   0.8913   0.8406   0.2506   0.5428   0.2233  -0.3686  -0.2153  -0.2763  -0.5984
#> 
#> sigma: 0.109391
#> lambda (gene 1): 2.03856
#> epsilon (gene 1): -0.272638
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 18620 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 618.317
#> delta (gene 1): 0.713492
#> phi (cell 1): 0.787768
#> s (cell 1): 0.457754
#> nu (cell 1): 0.422392
#> theta (batch 1): 0.0265704
#> betas:    0.1549   0.0023   1.1077   0.7475   0.9836   0.9638   0.0062   0.5182   0.0876  -0.3821   0.3419  -0.8927
#> 
#> sigma: 0.219962
#> lambda (gene 1): 0.346489
#> epsilon (gene 1): -0.297186
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 18640 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 596.539
#> delta (gene 1): 0.586736
#> phi (cell 1): 0.845719
#> s (cell 1): 0.516337
#> nu (cell 1): 0.42848
#> theta (batch 1): 0.0254691
#> betas:    0.7315  -0.0572   0.7231   1.1478   0.2010   0.5731   0.1149   0.6805  -0.6112   0.0804  -0.2470  -0.3940
#> 
#> sigma: 0.15728
#> lambda (gene 1): 1.14749
#> epsilon (gene 1): -0.413778
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 18660 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 815.454
#> delta (gene 1): 0.781277
#> phi (cell 1): 0.769123
#> s (cell 1): 0.353913
#> nu (cell 1): 0.42446
#> theta (batch 1): 0.0655298
#> betas:    0.8388  -0.1291   0.6481   1.2531  -0.0336   0.9163   0.2146   0.5844  -0.1749  -0.3697   0.5229  -0.8778
#> 
#> sigma: 0.203766
#> lambda (gene 1): 3.72956
#> epsilon (gene 1): -0.0213561
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 18680 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 537.407
#> delta (gene 1): 1.0442
#> phi (cell 1): 0.801202
#> s (cell 1): 0.750915
#> nu (cell 1): 0.419262
#> theta (batch 1): 0.0980035
#> betas:    0.3993   0.0206   0.2208   1.2743   0.8134   0.5710   0.0494   0.5206  -0.3697   0.0034  -0.6189  -0.5020
#> 
#> sigma: 0.183313
#> lambda (gene 1): 2.33318
#> epsilon (gene 1): 0.248775
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 18700 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 852.336
#> delta (gene 1): 0.484171
#> phi (cell 1): 0.729455
#> s (cell 1): 0.6659
#> nu (cell 1): 0.420051
#> theta (batch 1): 0.102491
#> betas:    0.9420  -0.0470   0.2040   1.4136   0.2569   0.4297   0.4469  -0.3106   0.4069  -0.6358  -0.1515  -0.3751
#> 
#> sigma: 0.146706
#> lambda (gene 1): 2.70615
#> epsilon (gene 1): -0.711917
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 18720 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 611.624
#> delta (gene 1): 0.877939
#> phi (cell 1): 0.721129
#> s (cell 1): 0.204275
#> nu (cell 1): 0.433217
#> theta (batch 1): 0.656369
#> betas:    0.7313  -0.0437   0.6352   0.4567   0.8925   0.4312   0.1607   0.3855  -0.4191   0.0355  -0.0610  -0.8750
#> 
#> sigma: 0.15395
#> lambda (gene 1): 0.835565
#> epsilon (gene 1): -0.120502
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 18740 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 531.007
#> delta (gene 1): 0.639782
#> phi (cell 1): 0.67829
#> s (cell 1): 0.356782
#> nu (cell 1): 0.433061
#> theta (batch 1): 0.472847
#> betas:    1.1202  -0.0895   0.3863   0.4461   0.9579   0.1133   0.2195   0.2216  -0.2576  -0.1095  -0.5912  -0.5062
#> 
#> sigma: 0.126169
#> lambda (gene 1): 1.21186
#> epsilon (gene 1): -0.151013
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 18760 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 558.699
#> delta (gene 1): 0.794948
#> phi (cell 1): 0.753219
#> s (cell 1): 0.265927
#> nu (cell 1): 0.422647
#> theta (batch 1): 0.177234
#> betas:    1.0518  -0.0566   0.4431   0.6008   0.6537   0.5838   0.1381   0.2084  -0.2562  -0.4184   0.0348  -1.0744
#> 
#> sigma: 0.165771
#> lambda (gene 1): 0.972737
#> epsilon (gene 1): -0.0855882
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 18780 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 798.244
#> delta (gene 1): 0.652164
#> phi (cell 1): 0.610732
#> s (cell 1): 0.318714
#> nu (cell 1): 0.443054
#> theta (batch 1): 0.379755
#> betas:    1.1597  -0.1288   0.4685   0.4554   0.5631   0.3442   0.7245  -0.2744  -0.0161   0.1622  -0.6779  -0.1337
#> 
#> sigma: 0.217646
#> lambda (gene 1): 0.924938
#> epsilon (gene 1): -0.293414
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 18800 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 770.927
#> delta (gene 1): 0.606397
#> phi (cell 1): 0.666933
#> s (cell 1): 0.615234
#> nu (cell 1): 0.419448
#> theta (batch 1): 0.180848
#> betas:    1.5193  -0.2263   0.0846   0.5960   0.2943   0.8835   0.2141  -0.2471   0.5634  -0.6537   0.0432  -0.1283
#> 
#> sigma: 0.160921
#> lambda (gene 1): 0.864572
#> epsilon (gene 1): -0.181655
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 18820 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 555.468
#> delta (gene 1): 0.739169
#> phi (cell 1): 0.67927
#> s (cell 1): 0.465385
#> nu (cell 1): 0.43636
#> theta (batch 1): 0.135353
#> betas:    1.5967  -0.1870   0.5251   0.7718   0.2080   0.2359   0.1731   0.1865  -0.1823  -0.4768  -0.0881   0.2632
#> 
#> sigma: 0.148828
#> lambda (gene 1): 0.300736
#> epsilon (gene 1): -0.117518
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 18840 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 622.439
#> delta (gene 1): 0.66042
#> phi (cell 1): 0.769584
#> s (cell 1): 0.365902
#> nu (cell 1): 0.418588
#> theta (batch 1): 0.108811
#> betas:    1.0812  -0.0545   0.8414   0.1820   0.9594   0.2349   0.0870  -0.0412   0.0008  -0.4371  -0.4502  -0.6185
#> 
#> sigma: 0.148295
#> lambda (gene 1): 0.561665
#> epsilon (gene 1): -0.170086
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 18860 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 787.936
#> delta (gene 1): 0.794249
#> phi (cell 1): 0.819961
#> s (cell 1): 0.261442
#> nu (cell 1): 0.424894
#> theta (batch 1): 0.62181
#> betas:    0.4020  -0.0894   0.6064   1.2660   0.6633   0.5466   0.4939   0.5647  -0.1693  -0.0185  -0.0266  -0.1053
#> 
#> sigma: 0.180997
#> lambda (gene 1): 1.33788
#> epsilon (gene 1): 0.00383399
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 18880 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 695.772
#> delta (gene 1): 0.733895
#> phi (cell 1): 0.782725
#> s (cell 1): 0.371522
#> nu (cell 1): 0.416376
#> theta (batch 1): 0.466274
#> betas:    1.0727  -0.1595   1.0302   0.7699   0.3457   0.4499   0.5537  -0.0797   0.1948  -0.0807  -0.2532  -0.0128
#> 
#> sigma: 0.15911
#> lambda (gene 1): 1.26803
#> epsilon (gene 1): -0.173402
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 18900 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 639.591
#> delta (gene 1): 0.540751
#> phi (cell 1): 0.923385
#> s (cell 1): 0.319557
#> nu (cell 1): 0.42404
#> theta (batch 1): 0.305482
#> betas:    0.8226  -0.0564   0.5343   0.5127   1.3460   0.0906   0.4525   0.2802  -0.1936  -0.1312  -0.4513  -0.4140
#> 
#> sigma: 0.142475
#> lambda (gene 1): 1.07163
#> epsilon (gene 1): -0.416119
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 18920 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 821.651
#> delta (gene 1): 0.574637
#> phi (cell 1): 0.982537
#> s (cell 1): 0.349542
#> nu (cell 1): 0.414259
#> theta (batch 1): 0.0953367
#> betas:    0.7656  -0.0021   0.2683   1.3498   0.5228   0.2572   0.4920  -0.6424   0.7025  -0.6206  -0.6832  -0.3895
#> 
#> sigma: 0.173652
#> lambda (gene 1): 1.03952
#> epsilon (gene 1): -0.390839
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 18940 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 860.928
#> delta (gene 1): 0.535335
#> phi (cell 1): 0.912639
#> s (cell 1): 0.374526
#> nu (cell 1): 0.433273
#> theta (batch 1): 0.109885
#> betas:    1.1239  -0.1967   0.5709   0.5124   0.8356   0.1087   0.5979   0.2433   0.0997  -0.0750  -0.2864   0.2113
#> 
#> sigma: 0.171723
#> lambda (gene 1): 0.794332
#> epsilon (gene 1): -0.345231
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 18960 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 686.261
#> delta (gene 1): 0.726599
#> phi (cell 1): 0.739586
#> s (cell 1): 0.645649
#> nu (cell 1): 0.428182
#> theta (batch 1): 0.517727
#> betas:    1.0873  -0.1398   0.5317   0.3070   0.9414   0.0495   0.6702   0.1670  -0.2333  -0.2382   0.0415  -0.1658
#> 
#> sigma: 0.134211
#> lambda (gene 1): 1.98777
#> epsilon (gene 1): -0.129784
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 18980 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 567.223
#> delta (gene 1): 0.543203
#> phi (cell 1): 0.727776
#> s (cell 1): 0.624792
#> nu (cell 1): 0.438622
#> theta (batch 1): 0.262098
#> betas:    0.8129  -0.1007   0.6203   0.7774   0.5053   0.6573   0.0835   0.4684  -0.1182  -0.3348  -0.0776  -0.2183
#> 
#> sigma: 0.202154
#> lambda (gene 1): 2.34885
#> epsilon (gene 1): -0.324062
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 19000 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 673.083
#> delta (gene 1): 0.821707
#> phi (cell 1): 0.778205
#> s (cell 1): 0.290093
#> nu (cell 1): 0.435395
#> theta (batch 1): 0.241609
#> betas:    0.9169  -0.0902   0.3708   0.7054   0.6400   0.1662   0.6397   0.0576  -0.2609   0.2179  -0.7137  -0.0621
#> 
#> sigma: 0.154558
#> lambda (gene 1): 1.05246
#> epsilon (gene 1): -0.0330112
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 19020 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 481.345
#> delta (gene 1): 0.909663
#> phi (cell 1): 0.614952
#> s (cell 1): 0.576856
#> nu (cell 1): 0.417565
#> theta (batch 1): 0.207082
#> betas:    1.1462  -0.0959   0.6268   0.3360   0.4043   0.6933   0.1772  -0.0498  -0.1256  -0.1773  -0.2267  -0.4552
#> 
#> sigma: 0.132528
#> lambda (gene 1): 0.358903
#> epsilon (gene 1): -0.0369224
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 19040 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 512.24
#> delta (gene 1): 0.913321
#> phi (cell 1): 0.588211
#> s (cell 1): 0.226776
#> nu (cell 1): 0.434508
#> theta (batch 1): 0.342081
#> betas:    1.2277  -0.0841   0.4247   0.7542   0.3812   0.3534   0.1066   0.1050   0.3214  -0.9667  -0.3044  -0.3353
#> 
#> sigma: 0.146678
#> lambda (gene 1): 1.09877
#> epsilon (gene 1): 0.297695
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 19060 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 622.501
#> delta (gene 1): 0.665054
#> phi (cell 1): 0.66917
#> s (cell 1): 0.303535
#> nu (cell 1): 0.432182
#> theta (batch 1): 0.209834
#> betas:    0.3977  -0.0068   0.6413   1.0158   0.4360   1.1175   0.0672   0.0490   0.4026  -0.5737  -0.2702  -0.1699
#> 
#> sigma: 0.141983
#> lambda (gene 1): 0.363738
#> epsilon (gene 1): -0.210541
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 19080 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 730.722
#> delta (gene 1): 0.575269
#> phi (cell 1): 0.805793
#> s (cell 1): 0.72527
#> nu (cell 1): 0.419401
#> theta (batch 1): 0.608763
#> betas:    0.3591  -0.0168   0.9469   0.8112   0.5731   0.8021   0.3615   0.0877   0.3524  -0.6173   0.0885  -0.6480
#> 
#> sigma: 0.155532
#> lambda (gene 1): 2.82355
#> epsilon (gene 1): -0.32616
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 19100 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 787.518
#> delta (gene 1): 0.656049
#> phi (cell 1): 0.916149
#> s (cell 1): 0.363112
#> nu (cell 1): 0.43218
#> theta (batch 1): 0.135858
#> betas:    0.7007   0.1146   0.3624   1.1619   0.3482   0.3071   0.5245  -0.3947  -0.2335  -0.5348  -0.8321  -0.8667
#> 
#> sigma: 0.189804
#> lambda (gene 1): 0.911119
#> epsilon (gene 1): -0.249165
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 19120 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 807.666
#> delta (gene 1): 0.617565
#> phi (cell 1): 0.808877
#> s (cell 1): 0.465389
#> nu (cell 1): 0.423251
#> theta (batch 1): 0.0707001
#> betas:    0.7343  -0.0557   1.2506   0.7587   0.5904   0.2261   0.5592  -0.1633   0.4079  -0.7014  -0.0507  -0.3934
#> 
#> sigma: 0.15502
#> lambda (gene 1): 0.412419
#> epsilon (gene 1): -0.244013
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 19140 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 571.701
#> delta (gene 1): 0.677311
#> phi (cell 1): 0.734204
#> s (cell 1): 0.579763
#> nu (cell 1): 0.422793
#> theta (batch 1): 0.111998
#> betas:    0.6247   0.0208   0.2219   1.2058   0.5776   0.3022   0.3237  -0.2513   0.6210  -1.0619  -0.1819  -0.4330
#> 
#> sigma: 0.155983
#> lambda (gene 1): 1.07938
#> epsilon (gene 1): -0.192362
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 19160 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 930.364
#> delta (gene 1): 0.782377
#> phi (cell 1): 0.754172
#> s (cell 1): 0.534508
#> nu (cell 1): 0.425778
#> theta (batch 1): 0.0306169
#> betas:    0.6196  -0.0616   0.6601   0.6981   0.5416   1.0142   0.1865  -0.0225  -0.0579   0.2095  -0.5119  -0.4264
#> 
#> sigma: 0.144146
#> lambda (gene 1): 1.41169
#> epsilon (gene 1): -0.115686
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 19180 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 635.132
#> delta (gene 1): 0.660788
#> phi (cell 1): 0.855142
#> s (cell 1): 0.394441
#> nu (cell 1): 0.423573
#> theta (batch 1): 0.0739705
#> betas:    0.7964  -0.1858   1.3140   0.4913   0.7134   0.5378   0.4566   0.1490   0.4150   0.0368  -0.2693   0.5659
#> 
#> sigma: 0.177786
#> lambda (gene 1): 1.3598
#> epsilon (gene 1): -0.28874
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 19200 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 672.311
#> delta (gene 1): 0.688103
#> phi (cell 1): 0.894618
#> s (cell 1): 0.507511
#> nu (cell 1): 0.439161
#> theta (batch 1): 0.0427969
#> betas:    0.9915  -0.2484   0.2321   0.8143   1.5449  -0.0641   0.6268   0.3640   0.4052   0.0061   0.2196   0.0783
#> 
#> sigma: 0.207987
#> lambda (gene 1): 1.78563
#> epsilon (gene 1): -0.269889
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 19220 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 691.837
#> delta (gene 1): 0.626975
#> phi (cell 1): 0.866558
#> s (cell 1): 0.334112
#> nu (cell 1): 0.409013
#> theta (batch 1): 0.169588
#> betas:    0.1235   0.0365   0.7001   0.8960   0.4885   1.1808   0.0697  -0.0126   0.6104  -0.4528  -0.6566   0.1898
#> 
#> sigma: 0.174471
#> lambda (gene 1): 1.50602
#> epsilon (gene 1): -0.336133
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 19240 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 743.524
#> delta (gene 1): 0.480615
#> phi (cell 1): 0.768495
#> s (cell 1): 0.444265
#> nu (cell 1): 0.438736
#> theta (batch 1): 0.265377
#> betas:    0.9313  -0.1789   0.2060   0.9395   0.9570   0.2671   0.5398  -0.0055   0.2154   0.1571  -0.0776  -0.1359
#> 
#> sigma: 0.137904
#> lambda (gene 1): 0.33644
#> epsilon (gene 1): -0.689349
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 19260 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 803.99
#> delta (gene 1): 0.698819
#> phi (cell 1): 0.686649
#> s (cell 1): 0.672858
#> nu (cell 1): 0.410413
#> theta (batch 1): 0.277887
#> betas:    1.1431  -0.2580  -0.0088   1.1587   0.5359   0.7955   0.5825   0.0498   0.2172   0.1360   0.1041   0.0789
#> 
#> sigma: 0.186256
#> lambda (gene 1): 0.510499
#> epsilon (gene 1): -0.195912
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 19280 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 741.605
#> delta (gene 1): 0.605468
#> phi (cell 1): 0.70836
#> s (cell 1): 2.05129
#> nu (cell 1): 0.42472
#> theta (batch 1): 0.51828
#> betas:    0.5033  -0.0724   1.4482   0.6663   0.8714   0.3424   0.2750   0.2068   0.2802  -0.0636  -0.4064  -0.4442
#> 
#> sigma: 0.186473
#> lambda (gene 1): 1.1108
#> epsilon (gene 1): -0.256198
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 19300 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 692.952
#> delta (gene 1): 0.840256
#> phi (cell 1): 0.695439
#> s (cell 1): 0.641284
#> nu (cell 1): 0.419396
#> theta (batch 1): 0.327309
#> betas:    0.6795   0.0369   0.3139   1.0662   0.4027   0.5444   0.2105  -0.4364   0.4444  -0.7537  -0.5452  -0.4954
#> 
#> sigma: 0.245097
#> lambda (gene 1): 0.662019
#> epsilon (gene 1): 0.00633092
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 19320 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 633.694
#> delta (gene 1): 0.781034
#> phi (cell 1): 0.568413
#> s (cell 1): 0.413251
#> nu (cell 1): 0.426825
#> theta (batch 1): 0.131662
#> betas:    1.0781  -0.2140   1.1984   0.6294   0.5998   0.5121   0.5276  -0.2393   0.7322   0.2504  -0.6117   0.0895
#> 
#> sigma: 0.162498
#> lambda (gene 1): 2.35377
#> epsilon (gene 1): -0.154031
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 19340 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 539.861
#> delta (gene 1): 0.613007
#> phi (cell 1): 0.626452
#> s (cell 1): 0.333977
#> nu (cell 1): 0.424617
#> theta (batch 1): 0.283988
#> betas:    0.9781  -0.0935   0.8337   0.1566   0.8088   0.8469  -0.1642   0.3364  -0.3677  -0.0119  -0.4477  -0.3007
#> 
#> sigma: 0.115405
#> lambda (gene 1): 0.954978
#> epsilon (gene 1): -0.233434
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 19360 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 903.191
#> delta (gene 1): 0.58409
#> phi (cell 1): 0.791343
#> s (cell 1): 0.369867
#> nu (cell 1): 0.42511
#> theta (batch 1): 0.191151
#> betas:    1.4733  -0.2782   0.3454   0.5808   0.3166   0.7514   0.7090  -0.3763   0.5994  -0.1384   0.1255   0.0151
#> 
#> sigma: 0.184375
#> lambda (gene 1): 0.87927
#> epsilon (gene 1): -0.458032
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 19380 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 745.117
#> delta (gene 1): 0.554938
#> phi (cell 1): 0.772923
#> s (cell 1): 0.413447
#> nu (cell 1): 0.416132
#> theta (batch 1): 0.279179
#> betas:    0.1411   0.0819   0.1952   1.4133   0.7202   0.2297   0.5988  -0.1643  -0.1982   0.2646  -0.9665  -0.3900
#> 
#> sigma: 0.173524
#> lambda (gene 1): 0.228241
#> epsilon (gene 1): -0.545696
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 19400 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 801.493
#> delta (gene 1): 0.755629
#> phi (cell 1): 0.736662
#> s (cell 1): 0.572089
#> nu (cell 1): 0.424833
#> theta (batch 1): 0.233299
#> betas:    0.8284  -0.1562   0.4010   1.0650   0.2672   0.7681   0.3809   0.4528   0.0086   0.0951  -0.3273   0.2339
#> 
#> sigma: 0.1432
#> lambda (gene 1): 0.303713
#> epsilon (gene 1): -0.0987133
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 19420 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 730.895
#> delta (gene 1): 0.640599
#> phi (cell 1): 0.699637
#> s (cell 1): 0.684942
#> nu (cell 1): 0.420924
#> theta (batch 1): 0.44234
#> betas:    1.0351  -0.1448   0.7830   1.1486   0.4016   0.6367   0.1725   0.4046   0.0681  -0.2410  -0.1315  -0.3432
#> 
#> sigma: 0.151087
#> lambda (gene 1): 1.14338
#> epsilon (gene 1): -0.213953
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 19440 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 803.283
#> delta (gene 1): 0.604117
#> phi (cell 1): 0.798044
#> s (cell 1): 0.677116
#> nu (cell 1): 0.428196
#> theta (batch 1): 0.194048
#> betas:    0.5385  -0.0403   0.7964   0.8332   0.7913   0.2855   0.8150   0.1153  -0.0929  -0.2019  -0.3725  -0.3317
#> 
#> sigma: 0.170615
#> lambda (gene 1): 0.585059
#> epsilon (gene 1): -0.185108
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 19460 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 613.958
#> delta (gene 1): 0.516183
#> phi (cell 1): 0.629469
#> s (cell 1): 0.435786
#> nu (cell 1): 0.410852
#> theta (batch 1): 0.0892783
#> betas:    0.8953  -0.0528   0.5643   0.6881   0.9107   0.3982   0.0990  -0.1369  -0.0086  -0.1203  -0.7196  -0.3456
#> 
#> sigma: 0.159162
#> lambda (gene 1): 0.803903
#> epsilon (gene 1): -0.405732
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 19480 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 629.194
#> delta (gene 1): 0.724406
#> phi (cell 1): 0.592524
#> s (cell 1): 0.556507
#> nu (cell 1): 0.430651
#> theta (batch 1): 0.14594
#> betas:    0.9935  -0.1588   0.6414   0.8032   0.6698   0.1987   0.4529   0.5541  -0.4662  -0.0620   0.1320  -0.2383
#> 
#> sigma: 0.164259
#> lambda (gene 1): 0.491021
#> epsilon (gene 1): -0.0593788
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 19500 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 572.544
#> delta (gene 1): 0.7362
#> phi (cell 1): 0.695175
#> s (cell 1): 0.179092
#> nu (cell 1): 0.412762
#> theta (batch 1): 0.532302
#> betas:    0.9638  -0.1282   0.8980   0.0736   1.0708   0.3361   0.4035   0.1628   0.0578  -0.1969  -0.2474  -0.2088
#> 
#> sigma: 0.143311
#> lambda (gene 1): 1.77207
#> epsilon (gene 1): -0.0583983
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 19520 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 803.345
#> delta (gene 1): 0.596638
#> phi (cell 1): 0.694434
#> s (cell 1): 0.804146
#> nu (cell 1): 0.435527
#> theta (batch 1): 0.307397
#> betas:    0.3583   0.0678   0.5987   0.9948   0.5702   0.3804   0.3465  -0.0327   0.0344  -0.4615  -0.7060  -0.3710
#> 
#> sigma: 0.161946
#> lambda (gene 1): 0.232842
#> epsilon (gene 1): -0.248047
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 19540 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 795.634
#> delta (gene 1): 0.705673
#> phi (cell 1): 0.773263
#> s (cell 1): 0.519977
#> nu (cell 1): 0.40889
#> theta (batch 1): 0.119382
#> betas:    0.8955  -0.1298   0.7546   0.6846   0.9627   0.0988   0.7004   0.3337  -0.3439  -0.0906   0.0343  -0.4102
#> 
#> sigma: 0.121132
#> lambda (gene 1): 0.597341
#> epsilon (gene 1): -0.0684895
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 19560 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 715.072
#> delta (gene 1): 0.801972
#> phi (cell 1): 0.728526
#> s (cell 1): 0.535302
#> nu (cell 1): 0.434867
#> theta (batch 1): 0.147356
#> betas:    1.2266  -0.1296  -0.0470   0.8565   1.3899  -0.2412   0.2445   0.0958   0.1688  -0.4860  -0.3619  -0.1868
#> 
#> sigma: 0.136696
#> lambda (gene 1): 1.46477
#> epsilon (gene 1): 0.0918844
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 19580 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 874.496
#> delta (gene 1): 0.887887
#> phi (cell 1): 0.753962
#> s (cell 1): 3.61154
#> nu (cell 1): 0.423039
#> theta (batch 1): 0.4723
#> betas:    1.3408  -0.0156   0.3473   0.9439   0.2714   0.2463   0.2119  -0.3875  -0.2779  -0.2625  -1.0611  -0.5706
#> 
#> sigma: 0.162238
#> lambda (gene 1): 1.05131
#> epsilon (gene 1): 0.13543
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 19600 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 729.522
#> delta (gene 1): 0.737272
#> phi (cell 1): 0.643432
#> s (cell 1): 0.927657
#> nu (cell 1): 0.434015
#> theta (batch 1): 0.287603
#> betas:    0.7598  -0.1790   1.3067   0.5331   0.9934   0.5994   0.1569   0.9790  -0.3024  -0.3530   0.5049  -0.1962
#> 
#> sigma: 0.172271
#> lambda (gene 1): 0.974119
#> epsilon (gene 1): 0.132624
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 19620 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 685.035
#> delta (gene 1): 0.509884
#> phi (cell 1): 0.73659
#> s (cell 1): 0.271633
#> nu (cell 1): 0.406806
#> theta (batch 1): 0.40903
#> betas:    0.6294   0.0484   0.7432   0.3456   0.2648   1.3220  -0.0564  -0.4091   0.3789  -0.6310  -1.0665   0.0238
#> 
#> sigma: 0.179954
#> lambda (gene 1): 0.517038
#> epsilon (gene 1): -0.351749
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 19640 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 622.228
#> delta (gene 1): 0.705956
#> phi (cell 1): 0.707187
#> s (cell 1): 0.574874
#> nu (cell 1): 0.427387
#> theta (batch 1): 0.310361
#> betas:    0.9732  -0.1621   0.6517   0.4168   0.7832   0.4205   0.2732   0.0790   0.4705  -0.1857  -0.0940  -0.1913
#> 
#> sigma: 0.142157
#> lambda (gene 1): 1.11246
#> epsilon (gene 1): -0.262872
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 19660 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 617.612
#> delta (gene 1): 0.66024
#> phi (cell 1): 0.69517
#> s (cell 1): 1.05269
#> nu (cell 1): 0.422844
#> theta (batch 1): 0.177309
#> betas:    0.5857  -0.0687   0.0996   1.1896   0.7870   0.4714   0.3046   0.1722  -0.0053  -0.1647  -0.2461  -0.5046
#> 
#> sigma: 0.136892
#> lambda (gene 1): 0.938399
#> epsilon (gene 1): -0.0894106
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 19680 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 693.367
#> delta (gene 1): 0.593126
#> phi (cell 1): 0.708224
#> s (cell 1): 0.377132
#> nu (cell 1): 0.422033
#> theta (batch 1): 0.0371008
#> betas:    0.8713  -0.0283   0.7347   0.5954   0.5010   0.6583   0.0279   0.1836  -0.2930  -0.3492  -0.4010  -0.5914
#> 
#> sigma: 0.175112
#> lambda (gene 1): 0.309499
#> epsilon (gene 1): -0.230852
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 19700 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 832.792
#> delta (gene 1): 0.571163
#> phi (cell 1): 0.628425
#> s (cell 1): 0.599006
#> nu (cell 1): 0.447172
#> theta (batch 1): 0.111861
#> betas:    0.9829  -0.1176   0.7553   0.6093   0.5020   0.5645   0.2361   0.4143  -0.2805   0.1126  -0.5354  -0.0496
#> 
#> sigma: 0.155819
#> lambda (gene 1): 1.34342
#> epsilon (gene 1): -0.365326
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 19720 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 646.132
#> delta (gene 1): 0.641698
#> phi (cell 1): 0.67076
#> s (cell 1): 0.473449
#> nu (cell 1): 0.42895
#> theta (batch 1): 0.110654
#> betas:    1.3534  -0.1542   0.6866   0.6445   0.2673   0.4938   0.0633   0.0744  -0.0911  -0.1425  -0.2679  -0.4499
#> 
#> sigma: 0.136954
#> lambda (gene 1): 1.06529
#> epsilon (gene 1): -0.253433
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 19740 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 670.721
#> delta (gene 1): 0.696297
#> phi (cell 1): 0.689653
#> s (cell 1): 0.354778
#> nu (cell 1): 0.429366
#> theta (batch 1): 0.123812
#> betas:    1.5676  -0.1693   0.7260   1.0213   0.0537   0.4970   0.2596   0.2988  -0.6587  -0.1025  -0.1276  -0.4507
#> 
#> sigma: 0.150573
#> lambda (gene 1): 0.677623
#> epsilon (gene 1): -0.11803
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 19760 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 712.088
#> delta (gene 1): 0.629502
#> phi (cell 1): 0.711922
#> s (cell 1): 0.61965
#> nu (cell 1): 0.411538
#> theta (batch 1): 0.373213
#> betas:    0.3715  -0.0389   0.6022   0.8545   0.9171   0.6563   0.0595   0.2008   0.4418  -0.5151  -0.3144   0.0793
#> 
#> sigma: 0.112214
#> lambda (gene 1): 0.4151
#> epsilon (gene 1): -0.178771
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 19780 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 601.828
#> delta (gene 1): 0.670209
#> phi (cell 1): 0.731268
#> s (cell 1): 0.484646
#> nu (cell 1): 0.404841
#> theta (batch 1): 0.165268
#> betas:    0.8671  -0.0902   0.4138   0.6631   0.8919   0.5623  -0.1969   0.6043  -0.0338  -0.1224  -0.6445   0.0236
#> 
#> sigma: 0.194351
#> lambda (gene 1): 0.744693
#> epsilon (gene 1): -0.160934
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 19800 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 807.186
#> delta (gene 1): 0.945372
#> phi (cell 1): 0.780236
#> s (cell 1): 1.19158
#> nu (cell 1): 0.418253
#> theta (batch 1): 0.382286
#> betas:    1.0819  -0.1340   0.1171   0.4850   1.1836   0.0913   0.3715   0.2616  -0.1608  -0.1675  -0.1293  -0.2908
#> 
#> sigma: 0.103047
#> lambda (gene 1): 0.670983
#> epsilon (gene 1): 0.139854
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 19820 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 844.493
#> delta (gene 1): 0.82057
#> phi (cell 1): 0.694072
#> s (cell 1): 0.35728
#> nu (cell 1): 0.419217
#> theta (batch 1): 0.598372
#> betas:    0.3507  -0.0421   0.2747   0.9358   1.4136   0.4968   0.0376   0.6049   0.0845  -0.2647  -0.1580  -0.2026
#> 
#> sigma: 0.15936
#> lambda (gene 1): 0.702407
#> epsilon (gene 1): -0.0107474
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 19840 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 537.789
#> delta (gene 1): 0.889667
#> phi (cell 1): 0.689829
#> s (cell 1): 0.278642
#> nu (cell 1): 0.423322
#> theta (batch 1): 0.109554
#> betas:    0.8382  -0.1699   1.0302   0.6885   0.8026   0.8495   0.2257   0.2686   0.1361  -0.1222   0.1273  -0.0758
#> 
#> sigma: 0.146662
#> lambda (gene 1): 0.770347
#> epsilon (gene 1): 0.066926
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 19860 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 696.056
#> delta (gene 1): 0.969199
#> phi (cell 1): 0.598482
#> s (cell 1): 0.399195
#> nu (cell 1): 0.409437
#> theta (batch 1): 0.179885
#> betas:    0.9115  -0.0818   0.7190   0.5524   0.7339   0.0808   0.8298  -0.0270  -0.2603   0.3023  -0.9506  -0.1971
#> 
#> sigma: 0.174772
#> lambda (gene 1): 0.82547
#> epsilon (gene 1): 0.228972
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 19880 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 735.8
#> delta (gene 1): 0.434154
#> phi (cell 1): 0.622039
#> s (cell 1): 0.885941
#> nu (cell 1): 0.415538
#> theta (batch 1): 0.420152
#> betas:    1.1602  -0.1780   0.8314   0.6433   0.6443  -0.0579   0.7975   0.1403   0.0175  -0.2488   0.0073  -0.1081
#> 
#> sigma: 0.141154
#> lambda (gene 1): 0.513544
#> epsilon (gene 1): -0.604771
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 19900 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 701.063
#> delta (gene 1): 0.709701
#> phi (cell 1): 0.705425
#> s (cell 1): 0.317211
#> nu (cell 1): 0.431867
#> theta (batch 1): 0.247056
#> betas:    0.5567   0.0062   0.5399   0.8166   0.7331   0.6889   0.1489   0.2656  -0.3467  -0.3623  -0.3753  -0.5710
#> 
#> sigma: 0.14769
#> lambda (gene 1): 1.52646
#> epsilon (gene 1): 0.0343678
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 19920 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 891.96
#> delta (gene 1): 0.787382
#> phi (cell 1): 0.856783
#> s (cell 1): 0.43976
#> nu (cell 1): 0.430787
#> theta (batch 1): 0.17366
#> betas:    0.9390  -0.1821   0.6638   0.6278   0.2215   1.2388   0.2240   0.2651  -0.0787   0.1612  -0.3667   0.3516
#> 
#> sigma: 0.206091
#> lambda (gene 1): 1.76554
#> epsilon (gene 1): 0.0340654
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 19940 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 733.874
#> delta (gene 1): 0.74082
#> phi (cell 1): 0.802076
#> s (cell 1): 0.683857
#> nu (cell 1): 0.408189
#> theta (batch 1): 0.108299
#> betas:    0.7261  -0.0676   0.8137   0.9536   0.4785   0.7251   0.1658   0.3071  -0.3950   0.1008  -0.6194  -0.2136
#> 
#> sigma: 0.127034
#> lambda (gene 1): 0.393947
#> epsilon (gene 1): 0.0416183
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 19960 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 634.411
#> delta (gene 1): 0.456463
#> phi (cell 1): 0.747775
#> s (cell 1): 0.280991
#> nu (cell 1): 0.412054
#> theta (batch 1): 0.17293
#> betas:    2.1193  -0.3035  -0.1349   0.6143   0.7955   0.0122   0.1653   0.1640   0.0508  -0.2068  -0.4311   0.2118
#> 
#> sigma: 0.190779
#> lambda (gene 1): 0.887112
#> epsilon (gene 1): -0.484822
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#> -----------------------------------------------------
#> Iteration 19980 out of 20000 has been completed.
#> -----------------------------------------------------
#> Current draws for selected parameters are displayed below.
#> mu (gene 1): 932.122
#> delta (gene 1): 0.837307
#> phi (cell 1): 0.812771
#> s (cell 1): 0.394414
#> nu (cell 1): 0.416913
#> theta (batch 1): 0.42181
#> betas:    0.3850   0.0064   0.7165   0.7733   0.2240   0.8927   0.3893  -0.0333  -0.0230  -0.1289  -0.3126  -0.5920
#> 
#> sigma: 0.110629
#> lambda (gene 1): 0.810266
#> epsilon (gene 1): -0.0595287
#> -----------------------------------------------------
#> Current proposal variances for Metropolis Hastings updates (log-scale).
#> LSmu (gene 1): -2.4
#> LSdelta (gene 1): -1.6
#> LSphi: 7.2
#> LSnu (cell 1): -5.51822
#> LStheta (batch 1): -1
#>  
#> -----------------------------------------------------
#> -----------------------------------------------------
#> All 20000 MCMC iterations have been completed.
#> -----------------------------------------------------
#> -----------------------------------------------------
#>  
#> -----------------------------------------------------
#> Please see below a summary of the overall acceptance rates.
#> -----------------------------------------------------
#>  
#> Minimum acceptance rate among mu[i]'s: 0.206267
#> Average acceptance rate among mu[i]'s: 0.433219
#> Maximum acceptance rate among mu[i]'s: 0.5622
#>  
#>  
#> Minimum acceptance rate among delta[i]'s: 0.3644
#> Average acceptance rate among delta[i]'s: 0.44467
#> Maximum acceptance rate among delta[i]'s: 0.5166
#>  
#>  
#> Acceptance rate for phi (joint): 0.497533
#>  
#>  
#> Minimum acceptance rate among nu[j]'s: 0.3722
#> Average acceptance rate among nu[j]'s: 0.441709
#> Maximum acceptance rate among nu[j]'s: 0.509133
#>  
#>  
#> Minimum acceptance rate among theta[k]'s: 0.444
#> Average acceptance rate among theta[k]'s: 0.444
#> Maximum acceptance rate among theta[k]'s: 0.444
#>  
#> -----------------------------------------------------
#>  
#> -------------------------------------------------------------
#> MCMC running time 
#> -------------------------------------------------------------
#> user: 6.91
#> system: 0.091
#> elapsed: 7.001
#> -------------------------------------------------------------
#> Output 
#> -------------------------------------------------------------
#> -------------------------------------------------------------
#> BASiCS version 2.21.0 : 
#> vertical integration (spikes case) 
#> -------------------------------------------------------------
params
#> A Params object of class BASiCSParams 
#> Parameters can be (estimable) or [not estimable], 'Default' or  'NOT DEFAULT' 
#> Secondary parameters are usually set during simulation
#> 
#> Global: 
#> (GENES)  (CELLS)   [SEED] 
#>      90       30   447753 
#> 
#> 7 additional parameters 
#> 
#> Genes: 
#> 
#> (PARAMS)
#> data.frame (90 x 2) with columns: Mean, Delta 
#>                Mean     Delta
#> Gene_0011 695.35308 0.6900794
#> Gene_0012  12.29801 9.0372164
#> Gene_0013  98.06908 2.9618157
#> Gene_0014  91.65091 5.5753079
#> # ... with 86 more rows
#> 
#> Cells: 
#> 
#> (PARAMS)
#> data.frame (30 x 2) with columns: Phi, S 
#>                       Phi         S
#> Cell_001_Batch1 0.7575119 0.4701208
#> Cell_002_Batch1 1.7109542 0.2195495
#> Cell_003_Batch1 0.8980183 0.4876586
#> Cell_004_Batch1 0.5180598 0.7561904
#> # ... with 26 more rows
#> 
#> Batches: 
#>     (BATCHES)  (BATCH CELLS) 
#>             1             30 
#> 
#> Spike-ins: 
#>         (NUMBER)           (MEANS) 
#>               10  700.329643969687 
#> 
#> Variability: 
#>           (THETA) 
#> 0.196620256627407 
#> 
# }